RNA–Protein interactions for RNA: ENST00000497269.5

MSH5-219, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 764 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-219ENST00000497269 GRK4P32298 578 aa8.41□□□□□ -1.06
MSH5-219ENST00000497269 CRKP46108 304 aa8.41□□□□□ -1.06
MSH5-219ENST00000497269 ERVK-24P63145 666 aa8.41□□□□□ -1.06
MSH5-219ENST00000497269 RSPO4Q2I0M5 234 aaPredicted RBP8.41□□□□□ -1.06
MSH5-219ENST00000497269 DIEXFQ68CQ4 756 aaKnown RBP8.41□□□□□ -1.06
MSH5-219ENST00000497269 TOM1L2Q6ZVM7 507 aa8.41□□□□□ -1.06
MSH5-219ENST00000497269 SMYD4Q8IYR2 804 aaPredicted RBP8.41□□□□□ -1.06
MSH5-219ENST00000497269 ISL2Q96A47 359 aa8.41□□□□□ -1.06
MSH5-219ENST00000497269 SEMA6CQ9H3T2 930 aa8.41□□□□□ -1.06
MSH5-219ENST00000497269 C7orf69Q9H7B7 122 aa8.41□□□□□ -1.06
MSH5-219ENST00000497269 CCSER2Q9H7U1 834 aa8.41□□□□□ -1.06
MSH5-219ENST00000497269 CORINQ9Y5Q5 1042 aa8.41□□□□□ -1.06
MSH5-219ENST00000497269 TNS1Q9HBL0 1735 aaKnown RBP8.4□□□□□ -1.06
MSH5-219ENST00000497269 FAM221AA4D161 298 aa8.4□□□□□ -1.06
MSH5-219ENST00000497269 IGHA1P01876 353 aa8.4□□□□□ -1.06
MSH5-219ENST00000497269 MCM4P33991 863 aa8.4□□□□□ -1.06
MSH5-219ENST00000497269 TNNI2P48788 182 aa8.4□□□□□ -1.06
MSH5-219ENST00000497269 RAD51AP2Q09MP3 1159 aa8.4□□□□□ -1.06
MSH5-219ENST00000497269 SEZ6Q53EL9 994 aa8.4□□□□□ -1.06
MSH5-219ENST00000497269 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.4□□□□□ -1.06
MSH5-219ENST00000497269 ZNF654Q8IZM8 581 aa8.4□□□□□ -1.06
MSH5-219ENST00000497269 RNF214Q8ND24 703 aa8.4□□□□□ -1.06
MSH5-219ENST00000497269 EAF1Q96JC9 268 aaPredicted RBP8.4□□□□□ -1.06
MSH5-219ENST00000497269 ACSS3Q9H6R3 686 aa8.4□□□□□ -1.06
MSH5-219ENST00000497269 SNCAIPQ9Y6H5 919 aa8.4□□□□□ -1.06
MSH5-219ENST00000497269 TOPAZ1Q8N9V7 1692 aa8.4□□□□□ -1.07
MSH5-219ENST00000497269 NRKQ7Z2Y5 1582 aa8.39□□□□□ -1.07
MSH5-219ENST00000497269 USP19O94966 1318 aa8.39□□□□□ -1.07
MSH5-219ENST00000497269 SYNGAP1Q96PV0 1343 aa8.39□□□□□ -1.07
MSH5-219ENST00000497269 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.39□□□□□ -1.07
MSH5-219ENST00000497269 CILPO75339 1184 aa8.39□□□□□ -1.07
MSH5-219ENST00000497269 APOBRQ0VD83 1088 aa8.39□□□□□ -1.07
MSH5-219ENST00000497269 PAK2Q13177 524 aa8.39□□□□□ -1.07
MSH5-219ENST00000497269 ZBTB37Q5TC79 503 aa8.39□□□□□ -1.07
MSH5-219ENST00000497269 SCARA3Q6AZY7 606 aa8.39□□□□□ -1.07
MSH5-219ENST00000497269 CDC37L1Q7L3B6 337 aa8.39□□□□□ -1.07
MSH5-219ENST00000497269 CYFIP1Q7L576 1253 aa8.39□□□□□ -1.07
MSH5-219ENST00000497269 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.39□□□□□ -1.07
MSH5-219ENST00000497269 FBXL6Q8N531 539 aa8.39□□□□□ -1.07
MSH5-219ENST00000497269 MFSD14AQ96MC6 490 aa8.39□□□□□ -1.07
MSH5-219ENST00000497269 PDGFDQ9GZP0 370 aaPredicted RBP8.39□□□□□ -1.07
MSH5-219ENST00000497269 SEMA6BQ9H3T3 888 aa8.39□□□□□ -1.07
MSH5-219ENST00000497269 QRICH2Q9H0J4 1663 aa8.39□□□□□ -1.07
MSH5-219ENST00000497269 GFRA2O00451 464 aa8.38□□□□□ -1.07
MSH5-219ENST00000497269 DYRK3O43781 588 aa8.38□□□□□ -1.07
MSH5-219ENST00000497269 PGRP06401 933 aa8.38□□□□□ -1.07
MSH5-219ENST00000497269 CDK5R2Q13319 367 aa8.38□□□□□ -1.07
MSH5-219ENST00000497269 MPP2Q14168 576 aa8.38□□□□□ -1.07
MSH5-219ENST00000497269 DDB1Q16531 1140 aa8.38□□□□□ -1.07
MSH5-219ENST00000497269 NKAPLQ5M9Q1 402 aa8.38□□□□□ -1.07
MSH5-219ENST00000497269 PAOXQ6QHF9 649 aa8.38□□□□□ -1.07
MSH5-219ENST00000497269 CCDC84Q86UT8 332 aaPredicted RBP8.38□□□□□ -1.07
MSH5-219ENST00000497269 CLEC10AQ8IUN9 316 aa8.38□□□□□ -1.07
MSH5-219ENST00000497269 NKD1Q969G9 470 aa8.38□□□□□ -1.07
MSH5-219ENST00000497269 GSX1Q9H4S2 264 aaPredicted RBP8.38□□□□□ -1.07
MSH5-219ENST00000497269 FBRSQ9HAH7 460 aa8.38□□□□□ -1.07
MSH5-219ENST00000497269 BRMS1Q9HCU9 246 aa8.38□□□□□ -1.07
MSH5-219ENST00000497269 PPP1R1BQ9UD71 204 aaPredicted RBP8.38□□□□□ -1.07
MSH5-219ENST00000497269 TTC21BQ7Z4L5 1316 aa8.37□□□□□ -1.07
MSH5-219ENST00000497269 EVC2Q86UK5 1308 aa8.37□□□□□ -1.07
MSH5-219ENST00000497269 GREM1O60565 184 aa8.37□□□□□ -1.07
MSH5-219ENST00000497269 MAP7Q14244 749 aa8.37□□□□□ -1.07
MSH5-219ENST00000497269 CWF19L2Q2TBE0 894 aaKnown RBP8.37□□□□□ -1.07
MSH5-219ENST00000497269 GK5Q6ZS86 529 aa8.37□□□□□ -1.07
MSH5-219ENST00000497269 REC114Q7Z4M0 266 aa8.37□□□□□ -1.07
MSH5-219ENST00000497269 SHISA5Q8N114 240 aa8.37□□□□□ -1.07
MSH5-219ENST00000497269 MARCH10Q8NA82 808 aaPredicted RBP8.37□□□□□ -1.07
MSH5-219ENST00000497269 XAGE3Q8WTP9 111 aa8.37□□□□□ -1.07
MSH5-219ENST00000497269 TBC1D32Q96NH3 1257 aa8.37□□□□□ -1.07
MSH5-219ENST00000497269 DPH2Q9BQC3 489 aaPredicted RBP8.37□□□□□ -1.07
MSH5-219ENST00000497269 FAM83CQ9BQN1 747 aa8.37□□□□□ -1.07
MSH5-219ENST00000497269 CAPN10Q9HC96 672 aa8.37□□□□□ -1.07
MSH5-219ENST00000497269 POLR3KQ9Y2Y1 108 aaPredicted RBP8.37□□□□□ -1.07
MSH5-219ENST00000497269 RGPD5Q99666 1765 aa8.37□□□□□ -1.07
MSH5-219ENST00000497269 COL5A2P05997 1499 aaPredicted RBP8.37□□□□□ -1.07
MSH5-219ENST00000497269 USP6P35125 1406 aa8.37□□□□□ -1.07
MSH5-219ENST00000497269 ROCK2O75116 1388 aaKnown RBP8.36□□□□□ -1.07
MSH5-219ENST00000497269 FANCGO15287 622 aa8.36□□□□□ -1.07
MSH5-219ENST00000497269 KCNQ2O43526 872 aa8.36□□□□□ -1.07
MSH5-219ENST00000497269 ZBTB7AO95365 584 aa8.36□□□□□ -1.07
MSH5-219ENST00000497269 PLCG1P19174 1290 aa8.36□□□□□ -1.07
MSH5-219ENST00000497269 NTF4P34130 210 aa8.36□□□□□ -1.07
MSH5-219ENST00000497269 RING1Q06587 406 aa8.36□□□□□ -1.07
MSH5-219ENST00000497269 NME9Q86XW9 330 aa8.36□□□□□ -1.07
MSH5-219ENST00000497269 ZNF507Q8TCN5 953 aa8.36□□□□□ -1.07
MSH5-219ENST00000497269 EZH1Q92800 747 aaPredicted RBP8.36□□□□□ -1.07
MSH5-219ENST00000497269 TGIF2Q9GZN2 237 aa8.36□□□□□ -1.07
MSH5-219ENST00000497269 WNT10AQ9GZT5 417 aa8.36□□□□□ -1.07
MSH5-219ENST00000497269 KLHL3Q9UH77 587 aa8.36□□□□□ -1.07
MSH5-219ENST00000497269 PCOLCE2Q9UKZ9 415 aa8.36□□□□□ -1.07
MSH5-219ENST00000497269 INPP5FQ9Y2H2 1132 aa8.36□□□□□ -1.07
MSH5-219ENST00000497269 KIAA1210Q9ULL0 1709 aa8.36□□□□□ -1.07
MSH5-219ENST00000497269 LMO7Q8WWI1 1683 aa8.36□□□□□ -1.07
MSH5-219ENST00000497269 CRB1P82279 1406 aa8.36□□□□□ -1.07
MSH5-219ENST00000497269 LRP5O75197 1615 aa8.36□□□□□ -1.07
MSH5-219ENST00000497269 CPDO75976 1380 aa8.35□□□□□ -1.07
MSH5-219ENST00000497269 FSTP19883 344 aa8.35□□□□□ -1.07
MSH5-219ENST00000497269 FBLN1P23142 703 aa8.35□□□□□ -1.07
MSH5-219ENST00000497269 NKG7Q16617 165 aa8.35□□□□□ -1.07
MSH5-219ENST00000497269 LTV1Q96GA3 475 aaPredicted RBP8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms