RNA–Protein interactions for RNA: ENST00000497210.5

CTPS1-211, Transcript of CTP synthase 1, humanhuman

TSL 3

Gene CTPS1, Length 463 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS1-211ENST00000497210 IQCA1Q86XH1 822 aa11.43□□□□□ -0.58
CTPS1-211ENST00000497210 PLPP7Q8NBV4 271 aa11.43□□□□□ -0.58
CTPS1-211ENST00000497210 EHBP1Q8NDI1 1231 aa11.43□□□□□ -0.58
CTPS1-211ENST00000497210 MAP4K5Q9Y4K4 846 aa11.43□□□□□ -0.58
CTPS1-211ENST00000497210 PLIN4Q96Q06 1357 aa11.42□□□□□ -0.58
CTPS1-211ENST00000497210 ERICH2A1L162 156 aa11.42□□□□□ -0.58
CTPS1-211ENST00000497210 SLC19A1P41440 591 aa11.42□□□□□ -0.58
CTPS1-211ENST00000497210 MCM2P49736 904 aa11.42□□□□□ -0.58
CTPS1-211ENST00000497210 RASA3Q14644 834 aa11.42□□□□□ -0.58
CTPS1-211ENST00000497210 ANKRD1Q15327 319 aa11.42□□□□□ -0.58
CTPS1-211ENST00000497210 SLC4A8Q2Y0W8 1093 aa11.42□□□□□ -0.58
CTPS1-211ENST00000497210 RRP12Q5JTH9 1297 aaKnown RBP11.42□□□□□ -0.58
CTPS1-211ENST00000497210 TRAF7Q6Q0C0 670 aa11.42□□□□□ -0.58
CTPS1-211ENST00000497210 RUFY3Q7L099 469 aa11.42□□□□□ -0.58
CTPS1-211ENST00000497210 UBAC1Q9BSL1 405 aa11.42□□□□□ -0.58
CTPS1-211ENST00000497210 MTA3Q9BTC8 594 aa11.42□□□□□ -0.58
CTPS1-211ENST00000497210 DEFB129Q9H1M3 183 aa11.42□□□□□ -0.58
CTPS1-211ENST00000497210 CYP2D7A0A087X1C5 515 aa11.41□□□□□ -0.58
CTPS1-211ENST00000497210 TSPY2A6NKD2 308 aa11.41□□□□□ -0.58
CTPS1-211ENST00000497210 RANBP6O60518 1105 aaKnown RBP11.41□□□□□ -0.58
CTPS1-211ENST00000497210 TSPY3P0CV98 308 aa11.41□□□□□ -0.58
CTPS1-211ENST00000497210 TSPY8P0CW00 308 aa11.41□□□□□ -0.58
CTPS1-211ENST00000497210 CYP2D6P10635 497 aa11.41□□□□□ -0.58
CTPS1-211ENST00000497210 RPS6KB1P23443 525 aa11.41□□□□□ -0.58
CTPS1-211ENST00000497210 NF2P35240 595 aa11.41□□□□□ -0.58
CTPS1-211ENST00000497210 BECN1Q14457 450 aa11.41□□□□□ -0.58
CTPS1-211ENST00000497210 SUPT20HL1Q3ZLR7 823 aa11.41□□□□□ -0.58
CTPS1-211ENST00000497210 CCDC178Q5BJE1 867 aa11.41□□□□□ -0.58
CTPS1-211ENST00000497210 KRT26Q7Z3Y9 468 aa11.41□□□□□ -0.58
CTPS1-211ENST00000497210 LDHDQ86WU2 507 aa11.41□□□□□ -0.58
CTPS1-211ENST00000497210 FOXP4Q8IVH2 680 aaPredicted RBP11.41□□□□□ -0.58
CTPS1-211ENST00000497210 HSCBQ8IWL3 235 aa11.41□□□□□ -0.58
CTPS1-211ENST00000497210 ZNF444Q8N0Y2 327 aaPredicted RBP11.41□□□□□ -0.58
CTPS1-211ENST00000497210 TMEM87BQ96K49 555 aa11.41□□□□□ -0.58
CTPS1-211ENST00000497210 TMEM39BQ9GZU3 492 aa11.41□□□□□ -0.58
CTPS1-211ENST00000497210 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.41□□□□□ -0.58
CTPS1-211ENST00000497210 DDTLA6NHG4 134 aaPredicted RBP11.4□□□□□ -0.58
CTPS1-211ENST00000497210 B4E1Z4 1266 aa11.4□□□□□ -0.58
CTPS1-211ENST00000497210 FGRP09769 529 aa11.4□□□□□ -0.58
CTPS1-211ENST00000497210 PLCD1P51178 756 aa11.4□□□□□ -0.58
CTPS1-211ENST00000497210 NEK4P51957 841 aa11.4□□□□□ -0.58
CTPS1-211ENST00000497210 NCOA4Q13772 614 aa11.4□□□□□ -0.58
CTPS1-211ENST00000497210 MAP7D1Q3KQU3 841 aa11.4□□□□□ -0.58
CTPS1-211ENST00000497210 STOX1Q6ZVD7 989 aa11.4□□□□□ -0.58
CTPS1-211ENST00000497210 DHX32Q7L7V1 743 aaKnown RBP11.4□□□□□ -0.58
CTPS1-211ENST00000497210 MB21D2Q8IYB1 491 aaPredicted RBP11.4□□□□□ -0.58
CTPS1-211ENST00000497210 DEPDC4Q8N2C3 294 aa11.4□□□□□ -0.58
CTPS1-211ENST00000497210 CCDC17Q96LX7 622 aa11.4□□□□□ -0.58
CTPS1-211ENST00000497210 UPF3BQ9BZI7 483 aaKnown RBP11.4□□□□□ -0.58
CTPS1-211ENST00000497210 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.4□□□□□ -0.58
CTPS1-211ENST00000497210 ASTN2O75129 1339 aaPredicted RBP11.39□□□□□ -0.59
CTPS1-211ENST00000497210 PRC1O43663 620 aa11.39□□□□□ -0.59
CTPS1-211ENST00000497210 CDK8P49336 464 aa11.39□□□□□ -0.59
CTPS1-211ENST00000497210 HIRAP54198 1017 aaPredicted RBP11.39□□□□□ -0.59
CTPS1-211ENST00000497210 GABPAQ06546 454 aa11.39□□□□□ -0.59
CTPS1-211ENST00000497210 DOCK1Q14185 1865 aa11.39□□□□□ -0.59
CTPS1-211ENST00000497210 ADCK5Q3MIX3 580 aa11.39□□□□□ -0.59
CTPS1-211ENST00000497210 SPRYD7Q5W111 196 aa11.39□□□□□ -0.59
CTPS1-211ENST00000497210 CDC37L1Q7L3B6 337 aa11.39□□□□□ -0.59
CTPS1-211ENST00000497210 METTL16Q86W50 562 aaKnown RBP11.39□□□□□ -0.59
CTPS1-211ENST00000497210 STK11IPQ8N1F8 1099 aa11.39□□□□□ -0.59
CTPS1-211ENST00000497210 RETREG2Q8NC44 543 aa11.39□□□□□ -0.59
CTPS1-211ENST00000497210 ZNF526Q8TF50 670 aaPredicted RBP11.39□□□□□ -0.59
CTPS1-211ENST00000497210 DYNLL2Q96FJ2 89 aa11.39□□□□□ -0.59
CTPS1-211ENST00000497210 KCTD15Q96SI1 283 aaPredicted RBP11.39□□□□□ -0.59
CTPS1-211ENST00000497210 PDRG1Q9NUG6 133 aa11.39□□□□□ -0.59
CTPS1-211ENST00000497210 ATAD5Q96QE3 1844 aa11.39□□□□□ -0.59
CTPS1-211ENST00000497210 GREB1LQ9C091 1923 aaPredicted RBP11.39□□□□□ -0.59
CTPS1-211ENST00000497210 WNT7AO00755 349 aa11.38□□□□□ -0.59
CTPS1-211ENST00000497210 SIAH2O43255 324 aa11.38□□□□□ -0.59
CTPS1-211ENST00000497210 LZTS3O60299 673 aaPredicted RBP11.38□□□□□ -0.59
CTPS1-211ENST00000497210 PRDM1O75626 825 aa11.38□□□□□ -0.59
CTPS1-211ENST00000497210 RASA1P20936 1047 aa11.38□□□□□ -0.59
CTPS1-211ENST00000497210 ZFPM1Q8IX07 1006 aa11.38□□□□□ -0.59
CTPS1-211ENST00000497210 CDK15Q96Q40 435 aa11.38□□□□□ -0.59
CTPS1-211ENST00000497210 KIF2CQ99661 725 aa11.38□□□□□ -0.59
CTPS1-211ENST00000497210 ZNF341Q9BYN7 854 aa11.38□□□□□ -0.59
CTPS1-211ENST00000497210 RRAGCQ9HB90 399 aa11.38□□□□□ -0.59
CTPS1-211ENST00000497210 CABP5Q9NP86 173 aa11.38□□□□□ -0.59
CTPS1-211ENST00000497210 GINM1Q9NU53 330 aa11.38□□□□□ -0.59
CTPS1-211ENST00000497210 PGAP2Q9UHJ9 254 aa11.38□□□□□ -0.59
CTPS1-211ENST00000497210 ANGEL1Q9UNK9 670 aaKnown RBP11.38□□□□□ -0.59
CTPS1-211ENST00000497210 TAF6LQ9Y6J9 622 aa11.38□□□□□ -0.59
CTPS1-211ENST00000497210 PAPPA2Q9BXP8 1791 aa11.38□□□□□ -0.59
CTPS1-211ENST00000497210 TNKSO95271 1327 aa11.37□□□□□ -0.59
CTPS1-211ENST00000497210 MPHOSPH10O00566 681 aaKnown RBP11.37□□□□□ -0.59
CTPS1-211ENST00000497210 IFIT3O14879 490 aaKnown RBP11.37□□□□□ -0.59
CTPS1-211ENST00000497210 PPP1R12BO60237 982 aaPredicted RBP11.37□□□□□ -0.59
CTPS1-211ENST00000497210 SHMT1P34896 483 aa11.37□□□□□ -0.59
CTPS1-211ENST00000497210 WTAPQ15007 396 aa11.37□□□□□ -0.59
CTPS1-211ENST00000497210 CERKLQ49MI3 558 aaPredicted RBP11.37□□□□□ -0.59
CTPS1-211ENST00000497210 TMEM67Q5HYA8 995 aa11.37□□□□□ -0.59
CTPS1-211ENST00000497210 TATDN1Q6P1N9 297 aa11.37□□□□□ -0.59
CTPS1-211ENST00000497210 TMEM179Q6ZVK1 233 aa11.37□□□□□ -0.59
CTPS1-211ENST00000497210 VASH1Q7L8A9 365 aaPredicted RBP11.37□□□□□ -0.59
CTPS1-211ENST00000497210 TMTC2Q8N394 836 aa11.37□□□□□ -0.59
CTPS1-211ENST00000497210 FBXL16Q8N461 479 aa11.37□□□□□ -0.59
CTPS1-211ENST00000497210 SLC44A5Q8NCS7 719 aa11.37□□□□□ -0.59
CTPS1-211ENST00000497210 CHMP4CQ96CF2 233 aa11.37□□□□□ -0.59
CTPS1-211ENST00000497210 TEPSINQ96N21 525 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms