RNA–Protein interactions for RNA: ENST00000496822.1

NEK4-206, Transcript of NIMA related kinase 4, humanhuman

TSL 3

Gene NEK4, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-206ENST00000496822 MSCO60682 206 aa17.91■□□□□ 0.46
NEK4-206ENST00000496822 NUCB1Q02818 461 aa17.91■□□□□ 0.46
NEK4-206ENST00000496822 KCTD2Q14681 263 aa17.91■□□□□ 0.46
NEK4-206ENST00000496822 LRRC26Q2I0M4 334 aa17.91■□□□□ 0.46
NEK4-206ENST00000496822 MCMDC2Q4G0Z9 681 aa17.91■□□□□ 0.46
NEK4-206ENST00000496822 SLFN13Q68D06 897 aa17.91■□□□□ 0.46
NEK4-206ENST00000496822 PRPF38AQ8NAV1 312 aaKnown RBP17.91■□□□□ 0.46
NEK4-206ENST00000496822 RILPL2Q969X0 211 aa17.91■□□□□ 0.46
NEK4-206ENST00000496822 IL17RBQ9NRM6 502 aa17.91■□□□□ 0.46
NEK4-206ENST00000496822 SLC5A4Q9NY91 659 aa17.91■□□□□ 0.46
NEK4-206ENST00000496822 ANAPC4Q9UJX5 808 aa17.91■□□□□ 0.46
NEK4-206ENST00000496822 TSPY2A6NKD2 308 aa17.9■□□□□ 0.46
NEK4-206ENST00000496822 SYN1P17600 705 aa17.9■□□□□ 0.46
NEK4-206ENST00000496822 COPB2P35606 906 aa17.9■□□□□ 0.46
NEK4-206ENST00000496822 ALX1Q15699 326 aa17.9■□□□□ 0.46
NEK4-206ENST00000496822 ZNF792Q3KQV3 632 aa17.9■□□□□ 0.46
NEK4-206ENST00000496822 CPXCR1Q8N123 301 aa17.9■□□□□ 0.46
NEK4-206ENST00000496822 SLC38A10Q9HBR0 1119 aa17.9■□□□□ 0.46
NEK4-206ENST00000496822 RAVER2Q9HCJ3 691 aaKnown RBP17.9■□□□□ 0.46
NEK4-206ENST00000496822 FEM1BQ9UK73 627 aa17.9■□□□□ 0.46
NEK4-206ENST00000496822 SUPT16HQ9Y5B9 1047 aaKnown RBP17.9■□□□□ 0.46
NEK4-206ENST00000496822 SEPT4O43236 478 aa17.89■□□□□ 0.45
NEK4-206ENST00000496822 FGAP02671 866 aa17.89■□□□□ 0.45
NEK4-206ENST00000496822 HSPD1P10809 573 aaKnown RBP17.89■□□□□ 0.45
NEK4-206ENST00000496822 BMP3P12645 472 aa17.89■□□□□ 0.45
NEK4-206ENST00000496822 SLC4A3P48751 1232 aa17.89■□□□□ 0.45
NEK4-206ENST00000496822 ISY1Q9ULR0 285 aaKnown RBP17.89■□□□□ 0.45
NEK4-206ENST00000496822 STX8Q9UNK0 236 aa17.89■□□□□ 0.45
NEK4-206ENST00000496822 CCDC171Q6TFL3 1326 aa17.89■□□□□ 0.45
NEK4-206ENST00000496822 TMEM232C9JQI7 657 aa17.88■□□□□ 0.45
NEK4-206ENST00000496822 ATP2A1O14983 1001 aa17.88■□□□□ 0.45
NEK4-206ENST00000496822 ORC4O43929 436 aa17.88■□□□□ 0.45
NEK4-206ENST00000496822 RANBP6O60518 1105 aaKnown RBP17.88■□□□□ 0.45
NEK4-206ENST00000496822 ZBED4O75132 1171 aa17.88■□□□□ 0.45
NEK4-206ENST00000496822 TAL1P17542 331 aaPredicted RBP17.88■□□□□ 0.45
NEK4-206ENST00000496822 GJC2Q5T442 439 aaPredicted RBP17.88■□□□□ 0.45
NEK4-206ENST00000496822 GMCL1Q96IK5 515 aa17.88■□□□□ 0.45
NEK4-206ENST00000496822 SENP6Q9GZR1 1112 aaPredicted RBP17.88■□□□□ 0.45
NEK4-206ENST00000496822 OSBPL3Q9H4L5 887 aa17.88■□□□□ 0.45
NEK4-206ENST00000496822 DNM1LO00429 736 aa17.87■□□□□ 0.45
NEK4-206ENST00000496822 FGRP09769 529 aa17.87■□□□□ 0.45
NEK4-206ENST00000496822 SDSP20132 328 aa17.87■□□□□ 0.45
NEK4-206ENST00000496822 MCCP23508 829 aa17.87■□□□□ 0.45
NEK4-206ENST00000496822 SLC1A4P43007 532 aa17.87■□□□□ 0.45
NEK4-206ENST00000496822 HAND2P61296 217 aa17.87■□□□□ 0.45
NEK4-206ENST00000496822 GDF15Q99988 308 aa17.87■□□□□ 0.45
NEK4-206ENST00000496822 TINF2Q9BSI4 451 aa17.87■□□□□ 0.45
NEK4-206ENST00000496822 DIS3Q9Y2L1 958 aaKnown RBP17.87■□□□□ 0.45
NEK4-206ENST00000496822 CTDP1Q9Y5B0 961 aaPredicted RBP17.87■□□□□ 0.45
NEK4-206ENST00000496822 ZMYM6O95789 1325 aa17.87■□□□□ 0.45
NEK4-206ENST00000496822 PLXNA1Q9UIW2 1896 aa17.86■□□□□ 0.45
NEK4-206ENST00000496822 DNAJC25-GNG10A0A024R161 153 aa17.86■□□□□ 0.45
NEK4-206ENST00000496822 NOVP48745 357 aa17.86■□□□□ 0.45
NEK4-206ENST00000496822 STAT2P52630 851 aa17.86■□□□□ 0.45
NEK4-206ENST00000496822 ATN1P54259 1190 aaPredicted RBP17.86■□□□□ 0.45
NEK4-206ENST00000496822 RRP12Q5JTH9 1297 aaKnown RBP17.86■□□□□ 0.45
NEK4-206ENST00000496822 KCTD1Q719H9 257 aa17.86■□□□□ 0.45
NEK4-206ENST00000496822 TICAM2Q86XR7 235 aa17.86■□□□□ 0.45
NEK4-206ENST00000496822 LENG1Q96BZ8 264 aaPredicted RBP17.86■□□□□ 0.45
NEK4-206ENST00000496822 TOMM22Q9NS69 142 aa17.86■□□□□ 0.45
NEK4-206ENST00000496822 MTMR7Q9Y216 660 aa17.86■□□□□ 0.45
NEK4-206ENST00000496822 ZNFX1Q9P2E3 1918 aaKnown RBP17.86■□□□□ 0.45
NEK4-206ENST00000496822 ZNF536O15090 1300 aa17.85■□□□□ 0.45
NEK4-206ENST00000496822 MYCNP04198 464 aaPredicted RBP17.85■□□□□ 0.45
NEK4-206ENST00000496822 MAGEA10P43363 369 aaPredicted RBP17.85■□□□□ 0.45
NEK4-206ENST00000496822 SNAP25P60880 206 aa17.85■□□□□ 0.45
NEK4-206ENST00000496822 IKQ13123 557 aaPredicted RBP17.85■□□□□ 0.45
NEK4-206ENST00000496822 TBC1D10CQ8IV04 446 aa17.85■□□□□ 0.45
NEK4-206ENST00000496822 DDX11Q96FC9 970 aa17.85■□□□□ 0.45
NEK4-206ENST00000496822 FGD4Q96M96 766 aa17.85■□□□□ 0.45
NEK4-206ENST00000496822 HOMER2Q9NSB8 354 aa17.85■□□□□ 0.45
NEK4-206ENST00000496822 ZNF865P0CJ78 1059 aaPredicted RBP17.84■□□□□ 0.45
NEK4-206ENST00000496822 OAZ1P54368 228 aa17.84■□□□□ 0.45
NEK4-206ENST00000496822 IRX6P78412 446 aaPredicted RBP17.84■□□□□ 0.45
NEK4-206ENST00000496822 LRRC41Q15345 812 aa17.84■□□□□ 0.45
NEK4-206ENST00000496822 PPP4R3BQ5MIZ7 849 aa17.84■□□□□ 0.45
NEK4-206ENST00000496822 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.84■□□□□ 0.45
NEK4-206ENST00000496822 FAM160B2Q86V87 743 aa17.84■□□□□ 0.45
NEK4-206ENST00000496822 STAG1Q8WVM7 1258 aa17.84■□□□□ 0.45
NEK4-206ENST00000496822 AGBL1Q96MI9 1066 aa17.84■□□□□ 0.45
NEK4-206ENST00000496822 NRBP1Q9UHY1 535 aa17.84■□□□□ 0.45
NEK4-206ENST00000496822 SZT2Q5T011 3432 aa17.84■□□□□ 0.45
NEK4-206ENST00000496822 KBTBD13C9JR72 458 aa17.83■□□□□ 0.44
NEK4-206ENST00000496822 SOX1O00570 391 aaPredicted RBP17.83■□□□□ 0.44
NEK4-206ENST00000496822 PDE4AP27815 886 aa17.83■□□□□ 0.44
NEK4-206ENST00000496822 RCSD1Q6JBY9 416 aa17.83■□□□□ 0.44
NEK4-206ENST00000496822 CWC27Q6UX04 472 aaKnown RBP17.83■□□□□ 0.44
NEK4-206ENST00000496822 ARRDC4Q8NCT1 418 aa17.83■□□□□ 0.44
NEK4-206ENST00000496822 CHURC1Q8WUH1 139 aa17.83■□□□□ 0.44
NEK4-206ENST00000496822 XPNPEP3Q9NQH7 507 aa17.83■□□□□ 0.44
NEK4-206ENST00000496822 DNAH12Q6ZR08 3092 aa17.83■□□□□ 0.44
NEK4-206ENST00000496822 LAMA3Q16787 3333 aa17.82■□□□□ 0.44
NEK4-206ENST00000496822 NEDD4P46934 1319 aa17.82■□□□□ 0.44
NEK4-206ENST00000496822 SYNGAP1Q96PV0 1343 aa17.82■□□□□ 0.44
NEK4-206ENST00000496822 A0A1W2PPC1 479 aa17.82■□□□□ 0.44
NEK4-206ENST00000496822 SNAI1O95863 264 aaPredicted RBP17.82■□□□□ 0.44
NEK4-206ENST00000496822 PGK1P00558 417 aa17.82■□□□□ 0.44
NEK4-206ENST00000496822 RTP1P59025 263 aa17.82■□□□□ 0.44
NEK4-206ENST00000496822 CCDC96Q2M329 555 aa17.82■□□□□ 0.44
NEK4-206ENST00000496822 CCDC174Q6PII3 467 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms