RNA–Protein interactions for RNA: ENST00000496785.5

CTDSP1-213, Transcript of CTD small phosphatase 1, humanhuman

TSL 5

Gene CTDSP1, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-213ENST00000496785 RGS2P41220 211 aa22.57■■□□□ 1.2
CTDSP1-213ENST00000496785 UBXN2AP68543 259 aa22.57■■□□□ 1.2
CTDSP1-213ENST00000496785 GPATCH4Q5T3I0 446 aaKnown RBP22.57■■□□□ 1.2
CTDSP1-213ENST00000496785 NCAPG2Q86XI2 1143 aa22.57■■□□□ 1.2
CTDSP1-213ENST00000496785 RIOX2Q8IUF8 465 aa22.57■■□□□ 1.2
CTDSP1-213ENST00000496785 MTA3Q9BTC8 594 aa22.57■■□□□ 1.2
CTDSP1-213ENST00000496785 SLC38A10Q9HBR0 1119 aa22.57■■□□□ 1.2
CTDSP1-213ENST00000496785 BIN2Q9UBW5 565 aaPredicted RBP22.57■■□□□ 1.2
CTDSP1-213ENST00000496785 GJD2Q9UKL4 321 aa22.57■■□□□ 1.2
CTDSP1-213ENST00000496785 ZNF214Q9UL59 606 aaPredicted RBP22.57■■□□□ 1.2
CTDSP1-213ENST00000496785 CAPN15O75808 1086 aa22.56■■□□□ 1.2
CTDSP1-213ENST00000496785 PDHBP11177 359 aa22.56■■□□□ 1.2
CTDSP1-213ENST00000496785 XRCC5P13010 732 aaKnown RBP22.56■■□□□ 1.2
CTDSP1-213ENST00000496785 ERCC3P19447 782 aa22.56■■□□□ 1.2
CTDSP1-213ENST00000496785 PTPREP23469 700 aa22.56■■□□□ 1.2
CTDSP1-213ENST00000496785 KCTD1Q719H9 257 aa22.56■■□□□ 1.2
CTDSP1-213ENST00000496785 REPS2Q8NFH8 660 aa22.56■■□□□ 1.2
CTDSP1-213ENST00000496785 ZNF333Q96JL9 665 aa22.56■■□□□ 1.2
CTDSP1-213ENST00000496785 SLC5A4Q9NY91 659 aa22.56■■□□□ 1.2
CTDSP1-213ENST00000496785 IFIT3O14879 490 aaKnown RBP22.55■■□□□ 1.2
CTDSP1-213ENST00000496785 EPB41L2O43491 1005 aaKnown RBP22.55■■□□□ 1.2
CTDSP1-213ENST00000496785 SNHG28P0DPA3 235 aa22.55■■□□□ 1.2
CTDSP1-213ENST00000496785 MAP2K5Q13163 448 aa22.55■■□□□ 1.2
CTDSP1-213ENST00000496785 MORN1Q5T089 497 aa22.55■■□□□ 1.2
CTDSP1-213ENST00000496785 CYB5R4Q7L1T6 521 aa22.55■■□□□ 1.2
CTDSP1-213ENST00000496785 ABRAQ8N0Z2 381 aa22.55■■□□□ 1.2
CTDSP1-213ENST00000496785 NKX2-3Q8TAU0 364 aa22.55■■□□□ 1.2
CTDSP1-213ENST00000496785 APBA2Q99767 749 aa22.55■■□□□ 1.2
CTDSP1-213ENST00000496785 EIF5BO60841 1220 aaKnown RBP22.54■■□□□ 1.2
CTDSP1-213ENST00000496785 ZNF543Q08ER8 600 aa22.54■■□□□ 1.2
CTDSP1-213ENST00000496785 GRB14Q14449 540 aa22.54■■□□□ 1.2
CTDSP1-213ENST00000496785 KRT32Q14532 448 aa22.54■■□□□ 1.2
CTDSP1-213ENST00000496785 SNRNP48Q6IEG0 339 aaKnown RBP22.54■■□□□ 1.2
CTDSP1-213ENST00000496785 BTNL9Q6UXG8 535 aa22.54■■□□□ 1.2
CTDSP1-213ENST00000496785 STOX1Q6ZVD7 989 aa22.54■■□□□ 1.2
CTDSP1-213ENST00000496785 SH3TC2Q8TF17 1288 aa22.54■■□□□ 1.2
CTDSP1-213ENST00000496785 TMEM106CQ9BVX2 250 aa22.54■■□□□ 1.2
CTDSP1-213ENST00000496785 PNMA2Q9UL42 364 aa22.54■■□□□ 1.2
CTDSP1-213ENST00000496785 FCER1AP12319 257 aa22.53■■□□□ 1.2
CTDSP1-213ENST00000496785 CYP2B6P20813 491 aa22.53■■□□□ 1.2
CTDSP1-213ENST00000496785 MCM5P33992 734 aa22.53■■□□□ 1.2
CTDSP1-213ENST00000496785 WTAPQ15007 396 aa22.53■■□□□ 1.2
CTDSP1-213ENST00000496785 SEC23AQ15436 765 aa22.53■■□□□ 1.2
CTDSP1-213ENST00000496785 ASPRV1Q53RT3 343 aa22.53■■□□□ 1.2
CTDSP1-213ENST00000496785 MB21D2Q8IYB1 491 aaPredicted RBP22.53■■□□□ 1.2
CTDSP1-213ENST00000496785 CPXCR1Q8N123 301 aa22.53■■□□□ 1.2
CTDSP1-213ENST00000496785 CHMP4CQ96CF2 233 aa22.53■■□□□ 1.2
CTDSP1-213ENST00000496785 FBXO40Q9UH90 709 aa22.53■■□□□ 1.2
CTDSP1-213ENST00000496785 PRR12Q9ULL5 1215 aa22.53■■□□□ 1.2
CTDSP1-213ENST00000496785 TAF6LQ9Y6J9 622 aa22.53■■□□□ 1.2
CTDSP1-213ENST00000496785 COL11A1P12107 1806 aaPredicted RBP22.52■■□□□ 1.2
CTDSP1-213ENST00000496785 HMGCRP04035 888 aa22.52■■□□□ 1.2
CTDSP1-213ENST00000496785 KCTD2Q14681 263 aa22.52■■□□□ 1.2
CTDSP1-213ENST00000496785 SYDE2Q5VT97 1194 aa22.52■■□□□ 1.2
CTDSP1-213ENST00000496785 USP6NLQ92738 828 aa22.52■■□□□ 1.2
CTDSP1-213ENST00000496785 TMEM87BQ96K49 555 aa22.52■■□□□ 1.2
CTDSP1-213ENST00000496785 GPCPD1Q9NPB8 672 aa22.52■■□□□ 1.2
CTDSP1-213ENST00000496785 FRMPD2Q68DX3 1309 aaPredicted RBP22.52■■□□□ 1.2
CTDSP1-213ENST00000496785 ZNF236Q9UL36 1845 aa22.52■■□□□ 1.2
CTDSP1-213ENST00000496785 HOXC6P09630 235 aa22.51■■□□□ 1.19
CTDSP1-213ENST00000496785 TKFCQ3LXA3 575 aa22.51■■□□□ 1.19
CTDSP1-213ENST00000496785 TSGA10IPQ3SY00 556 aa22.51■■□□□ 1.19
CTDSP1-213ENST00000496785 TMEM67Q5HYA8 995 aa22.51■■□□□ 1.19
CTDSP1-213ENST00000496785 DPP9Q86TI2 863 aa22.51■■□□□ 1.19
CTDSP1-213ENST00000496785 TMTC2Q8N394 836 aa22.51■■□□□ 1.19
CTDSP1-213ENST00000496785 DOCK3Q8IZD9 2030 aa22.51■■□□□ 1.19
CTDSP1-213ENST00000496785 PRC1O43663 620 aa22.5■■□□□ 1.19
CTDSP1-213ENST00000496785 PARP1P09874 1014 aaKnown RBP22.5■■□□□ 1.19
CTDSP1-213ENST00000496785 ELNP15502 786 aa22.5■■□□□ 1.19
CTDSP1-213ENST00000496785 ADORA2AP29274 412 aa22.5■■□□□ 1.19
CTDSP1-213ENST00000496785 RASGRP2Q7LDG7 609 aa22.5■■□□□ 1.19
CTDSP1-213ENST00000496785 CHST13Q8NET6 341 aa22.5■■□□□ 1.19
CTDSP1-213ENST00000496785 MMP19Q99542 508 aa22.5■■□□□ 1.19
CTDSP1-213ENST00000496785 RAVER2Q9HCJ3 691 aaKnown RBP22.5■■□□□ 1.19
CTDSP1-213ENST00000496785 INHAP05111 366 aa22.49■■□□□ 1.19
CTDSP1-213ENST00000496785 HMGB1P09429 215 aaKnown RBP22.49■■□□□ 1.19
CTDSP1-213ENST00000496785 CATIPQ7Z7H3 387 aa22.49■■□□□ 1.19
CTDSP1-213ENST00000496785 NEK1Q96PY6 1258 aa22.49■■□□□ 1.19
CTDSP1-213ENST00000496785 RANBP17Q9H2T7 1088 aaKnown RBP22.49■■□□□ 1.19
CTDSP1-213ENST00000496785 PLXNB2O15031 1838 aa22.49■■□□□ 1.19
CTDSP1-213ENST00000496785 SLC16A2P36021 539 aa22.48■■□□□ 1.19
CTDSP1-213ENST00000496785 SLC4A3P48751 1232 aa22.48■■□□□ 1.19
CTDSP1-213ENST00000496785 ANTXR2P58335 489 aa22.48■■□□□ 1.19
CTDSP1-213ENST00000496785 TTBK2Q6IQ55 1244 aa22.48■■□□□ 1.19
CTDSP1-213ENST00000496785 DHX30Q7L2E3 1194 aaKnown RBP eCLIP22.48■■□□□ 1.19
CTDSP1-213ENST00000496785 WDR19Q8NEZ3 1342 aa22.48■■□□□ 1.19
CTDSP1-213ENST00000496785 ICAM1P05362 532 aa22.47■■□□□ 1.19
CTDSP1-213ENST00000496785 CAPN2P17655 700 aa22.47■■□□□ 1.19
CTDSP1-213ENST00000496785 HSPA4P34932 840 aa22.47■■□□□ 1.19
CTDSP1-213ENST00000496785 SOX10P56693 466 aa22.47■■□□□ 1.19
CTDSP1-213ENST00000496785 MFSD14CQ5VZR4 134 aa22.47■■□□□ 1.19
CTDSP1-213ENST00000496785 CHST3Q7LGC8 479 aa22.47■■□□□ 1.19
CTDSP1-213ENST00000496785 IGDCC4Q8TDY8 1250 aa22.47■■□□□ 1.19
CTDSP1-213ENST00000496785 TRIB2Q92519 343 aa22.47■■□□□ 1.19
CTDSP1-213ENST00000496785 DDX11Q96FC9 970 aa22.47■■□□□ 1.19
CTDSP1-213ENST00000496785 ACAD9Q9H845 621 aa22.47■■□□□ 1.19
CTDSP1-213ENST00000496785 GOLGA8HP0CJ92 632 aa22.46■■□□□ 1.19
CTDSP1-213ENST00000496785 LIFRP42702 1097 aa22.46■■□□□ 1.19
CTDSP1-213ENST00000496785 CCDC174Q6PII3 467 aa22.46■■□□□ 1.19
CTDSP1-213ENST00000496785 NFXL1Q6ZNB6 911 aa22.46■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms