RNA–Protein interactions for RNA: ENST00000496723.1

CD46-218, Transcript of CD46 molecule, humanhuman

TSL 5

Gene CD46, Length 661 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-218ENST00000496723 NRDCO43847 1150 aa6.32□□□□□ -1.4
CD46-218ENST00000496723 FOXD2O60548 495 aaPredicted RBP6.32□□□□□ -1.4
CD46-218ENST00000496723 RPL10P27635 214 aaKnown RBP6.32□□□□□ -1.4
CD46-218ENST00000496723 GBP1P32455 592 aa6.32□□□□□ -1.4
CD46-218ENST00000496723 SLC14A2Q15849 920 aa6.32□□□□□ -1.4
CD46-218ENST00000496723 ADGRF1Q5T601 910 aa6.32□□□□□ -1.4
CD46-218ENST00000496723 OLFML2BQ68BL8 750 aa6.32□□□□□ -1.4
CD46-218ENST00000496723 ZNF654Q8IZM8 581 aa6.32□□□□□ -1.4
CD46-218ENST00000496723 USHBP1Q8N6Y0 703 aa6.32□□□□□ -1.4
CD46-218ENST00000496723 MAP6Q96JE9 813 aa6.32□□□□□ -1.4
CD46-218ENST00000496723 KIF2CQ99661 725 aa6.32□□□□□ -1.4
CD46-218ENST00000496723 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.32□□□□□ -1.4
CD46-218ENST00000496723 SIRT5Q9NXA8 310 aa6.32□□□□□ -1.4
CD46-218ENST00000496723 ZMYM5Q9UJ78 669 aa6.32□□□□□ -1.4
CD46-218ENST00000496723 IRAK3Q9Y616 596 aa6.32□□□□□ -1.4
CD46-218ENST00000496723 A0A0G2JLL6 359 aaPredicted RBP6.31□□□□□ -1.4
CD46-218ENST00000496723 ABLIM1O14639 778 aa6.31□□□□□ -1.4
CD46-218ENST00000496723 PCBP3P57721 371 aaKnown RBP6.31□□□□□ -1.4
CD46-218ENST00000496723 SRSF3P84103 164 aaKnown RBP6.31□□□□□ -1.4
CD46-218ENST00000496723 GK5Q6ZS86 529 aa6.31□□□□□ -1.4
CD46-218ENST00000496723 WAPLQ7Z5K2 1190 aa6.31□□□□□ -1.4
CD46-218ENST00000496723 SLITRK4Q8IW52 837 aa6.31□□□□□ -1.4
CD46-218ENST00000496723 LINC00116Q8NCU8 138 aa6.31□□□□□ -1.4
CD46-218ENST00000496723 HDAC8Q9BY41 377 aa6.31□□□□□ -1.4
CD46-218ENST00000496723 MBD1Q9UIS9 605 aaPredicted RBP6.31□□□□□ -1.4
CD46-218ENST00000496723 N4BP3O15049 544 aa6.3□□□□□ -1.4
CD46-218ENST00000496723 TRIM13O60858 407 aa6.3□□□□□ -1.4
CD46-218ENST00000496723 DNAJA2O60884 412 aa6.3□□□□□ -1.4
CD46-218ENST00000496723 SASH1O94885 1247 aa6.3□□□□□ -1.4
CD46-218ENST00000496723 ATE1O95260 518 aa6.3□□□□□ -1.4
CD46-218ENST00000496723 PNLIPP16233 465 aa6.3□□□□□ -1.4
CD46-218ENST00000496723 ZNF165P49910 485 aa6.3□□□□□ -1.4
CD46-218ENST00000496723 YBX1P67809 324 aaKnown RBP6.3□□□□□ -1.4
CD46-218ENST00000496723 CLCQ05315 142 aa6.3□□□□□ -1.4
CD46-218ENST00000496723 RAD51AP2Q09MP3 1159 aa6.3□□□□□ -1.4
CD46-218ENST00000496723 SSPNQ14714 243 aa6.3□□□□□ -1.4
CD46-218ENST00000496723 NFIXQ14938 502 aa6.3□□□□□ -1.4
CD46-218ENST00000496723 CEP128Q6ZU80 1094 aa6.3□□□□□ -1.4
CD46-218ENST00000496723 REXO1Q8N1G1 1221 aaKnown RBP6.3□□□□□ -1.4
CD46-218ENST00000496723 TCTN2Q96GX1 697 aa6.3□□□□□ -1.4
CD46-218ENST00000496723 EHMT1Q9H9B1 1298 aa6.3□□□□□ -1.4
CD46-218ENST00000496723 RTEL1Q9NZ71 1219 aa6.3□□□□□ -1.4
CD46-218ENST00000496723 TCFL5Q9UL49 500 aa6.3□□□□□ -1.4
CD46-218ENST00000496723 SSU72P8A0A1W2PR75 194 aa6.29□□□□□ -1.4
CD46-218ENST00000496723 USP2O75604 605 aaPredicted RBP6.29□□□□□ -1.4
CD46-218ENST00000496723 SYN1P17600 705 aa6.29□□□□□ -1.4
CD46-218ENST00000496723 GALK1P51570 392 aa6.29□□□□□ -1.4
CD46-218ENST00000496723 SIRT2Q8IXJ6 389 aa6.29□□□□□ -1.4
CD46-218ENST00000496723 DACT3Q96B18 629 aaPredicted RBP6.29□□□□□ -1.4
CD46-218ENST00000496723 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.29□□□□□ -1.4
CD46-218ENST00000496723 TMEM82A0PJX8 343 aa6.28□□□□□ -1.4
CD46-218ENST00000496723 SLC22A31A6NKX4 558 aa6.28□□□□□ -1.4
CD46-218ENST00000496723 EFEMP2O95967 443 aa6.28□□□□□ -1.4
CD46-218ENST00000496723 PI3P19957 117 aa6.28□□□□□ -1.4
CD46-218ENST00000496723 ENDOUP21128 410 aaKnown RBP6.28□□□□□ -1.4
CD46-218ENST00000496723 PAK2Q13177 524 aa6.28□□□□□ -1.4
CD46-218ENST00000496723 NBPF9Q3BBW0 867 aa6.28□□□□□ -1.4
CD46-218ENST00000496723 CXorf38Q8TB03 319 aa6.28□□□□□ -1.4
CD46-218ENST00000496723 HHIPL1Q96JK4 782 aa6.28□□□□□ -1.4
CD46-218ENST00000496723 FOXP3Q9BZS1 431 aa6.28□□□□□ -1.4
CD46-218ENST00000496723 GMIPQ9P107 970 aa6.28□□□□□ -1.4
CD46-218ENST00000496723 TNFRSF10DQ9UBN6 386 aa6.28□□□□□ -1.4
CD46-218ENST00000496723 UBOX5O94941 541 aa6.27□□□□□ -1.41
CD46-218ENST00000496723 RAG1P15918 1043 aa6.27□□□□□ -1.41
CD46-218ENST00000496723 VIPR1P32241 457 aa6.27□□□□□ -1.41
CD46-218ENST00000496723 AFF3P51826 1226 aaKnown RBP6.27□□□□□ -1.41
CD46-218ENST00000496723 RTP1P59025 263 aa6.27□□□□□ -1.41
CD46-218ENST00000496723 ERVFRD-1P60508 538 aa6.27□□□□□ -1.41
CD46-218ENST00000496723 ARSHQ5FYA8 562 aa6.27□□□□□ -1.41
CD46-218ENST00000496723 NBPF12Q5TAG4 269 aaPredicted RBP6.27□□□□□ -1.41
CD46-218ENST00000496723 ERICH6BQ5W0A0 696 aa6.27□□□□□ -1.41
CD46-218ENST00000496723 OVOS1Q6IE37 1185 aa6.27□□□□□ -1.41
CD46-218ENST00000496723 TGIF2Q9GZN2 237 aa6.27□□□□□ -1.41
CD46-218ENST00000496723 XYLT2Q9H1B5 865 aa6.27□□□□□ -1.41
CD46-218ENST00000496723 CNTD2Q9H8S5 307 aa6.27□□□□□ -1.41
CD46-218ENST00000496723 IRS4O14654 1257 aaPredicted RBP6.26□□□□□ -1.41
CD46-218ENST00000496723 MPOP05164 745 aa6.26□□□□□ -1.41
CD46-218ENST00000496723 TCF3P15923 654 aa6.26□□□□□ -1.41
CD46-218ENST00000496723 ARL4AP40617 200 aa6.26□□□□□ -1.41
CD46-218ENST00000496723 CCNFP41002 786 aa6.26□□□□□ -1.41
CD46-218ENST00000496723 TMEM62Q0P6H9 643 aa6.26□□□□□ -1.41
CD46-218ENST00000496723 GALNT18Q6P9A2 607 aa6.26□□□□□ -1.41
CD46-218ENST00000496723 DBX2Q6ZNG2 339 aa6.26□□□□□ -1.41
CD46-218ENST00000496723 PANK1Q8TE04 598 aa6.26□□□□□ -1.41
CD46-218ENST00000496723 FCRL2Q96LA5 508 aaPredicted RBP6.26□□□□□ -1.41
CD46-218ENST00000496723 ACBD3Q9H3P7 528 aa6.26□□□□□ -1.41
CD46-218ENST00000496723 ANTXR1Q9H6X2 564 aa6.26□□□□□ -1.41
CD46-218ENST00000496723 WTIPA6NIX2 430 aaPredicted RBP6.25□□□□□ -1.41
CD46-218ENST00000496723 SIGLEC6O43699 453 aa6.25□□□□□ -1.41
CD46-218ENST00000496723 SYPP08247 313 aa6.25□□□□□ -1.41
CD46-218ENST00000496723 ERCC5P28715 1186 aaPredicted RBP6.25□□□□□ -1.41
CD46-218ENST00000496723 EPHB3P54753 998 aa6.25□□□□□ -1.41
CD46-218ENST00000496723 LAPTM5Q13571 262 aa6.25□□□□□ -1.41
CD46-218ENST00000496723 LRRFIP1Q32MZ4 808 aaKnown RBP6.25□□□□□ -1.41
CD46-218ENST00000496723 BBS9Q3SYG4 887 aa6.25□□□□□ -1.41
CD46-218ENST00000496723 CDCP2Q5VXM1 449 aa6.25□□□□□ -1.41
CD46-218ENST00000496723 FBXW10Q5XX13 1052 aa6.25□□□□□ -1.41
CD46-218ENST00000496723 TMC3Q7Z5M5 1100 aa6.25□□□□□ -1.41
CD46-218ENST00000496723 MZB1Q8WU39 189 aa6.25□□□□□ -1.41
CD46-218ENST00000496723 GPRASP2Q96D09 838 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms