RNA–Protein interactions for RNA: ENST00000496468.1

TSSC4-210, Transcript of tumor suppressing subtransferable candidate 4, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TSSC4, Length 912 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4-210ENST00000496468 LIMCH1Q9UPQ0 1083 aa21.35■■□□□ 1.01
TSSC4-210ENST00000496468 CCDC196A0A1B0GTZ2 297 aa21.34■■□□□ 1.01
TSSC4-210ENST00000496468 KLRF2D3W0D1 207 aa21.34■■□□□ 1.01
TSSC4-210ENST00000496468 DHX16O60231 1041 aaKnown RBP21.34■■□□□ 1.01
TSSC4-210ENST00000496468 CD2BP2O95400 341 aaKnown RBP21.34■■□□□ 1.01
TSSC4-210ENST00000496468 LARGE1O95461 756 aa21.34■■□□□ 1.01
TSSC4-210ENST00000496468 CYP2C8P10632 490 aa21.34■■□□□ 1.01
TSSC4-210ENST00000496468 SLC16A2P36021 539 aa21.34■■□□□ 1.01
TSSC4-210ENST00000496468 COG2Q14746 738 aa21.34■■□□□ 1.01
TSSC4-210ENST00000496468 PPP2R5BQ15173 497 aa21.34■■□□□ 1.01
TSSC4-210ENST00000496468 BTNL9Q6UXG8 535 aa21.34■■□□□ 1.01
TSSC4-210ENST00000496468 TMTC3Q6ZXV5 915 aa21.34■■□□□ 1.01
TSSC4-210ENST00000496468 SLKQ9H2G2 1235 aaPredicted RBP21.34■■□□□ 1.01
TSSC4-210ENST00000496468 COL11A1P12107 1806 aaPredicted RBP21.34■■□□□ 1.01
TSSC4-210ENST00000496468 PLEKHA8P1O95397 391 aa21.33■■□□□ 1.01
TSSC4-210ENST00000496468 DSG3P32926 999 aa21.33■■□□□ 1.01
TSSC4-210ENST00000496468 CCT2P78371 535 aaKnown RBP21.33■■□□□ 1.01
TSSC4-210ENST00000496468 DNAJC5GQ8N7S2 189 aa21.33■■□□□ 1.01
TSSC4-210ENST00000496468 PRPF38AQ8NAV1 312 aaKnown RBP21.33■■□□□ 1.01
TSSC4-210ENST00000496468 ATG4CQ96DT6 458 aa21.33■■□□□ 1.01
TSSC4-210ENST00000496468 LZTS2Q9BRK4 669 aa21.33■■□□□ 1.01
TSSC4-210ENST00000496468 CPVLQ9H3G5 476 aa21.33■■□□□ 1.01
TSSC4-210ENST00000496468 PRR12Q9ULL5 1215 aa21.33■■□□□ 1.01
TSSC4-210ENST00000496468 PFKFB2O60825 505 aa21.32■■□□□ 1
TSSC4-210ENST00000496468 MAP2K1Q02750 393 aaPredicted RBP21.32■■□□□ 1
TSSC4-210ENST00000496468 ME3Q16798 604 aa21.32■■□□□ 1
TSSC4-210ENST00000496468 GTF3C6Q969F1 213 aa21.32■■□□□ 1
TSSC4-210ENST00000496468 ZSCAN31Q96LW9 406 aaPredicted RBP21.32■■□□□ 1
TSSC4-210ENST00000496468 P2RX7Q99572 595 aaKnown RBP21.32■■□□□ 1
TSSC4-210ENST00000496468 UBA5Q9GZZ9 404 aa21.32■■□□□ 1
TSSC4-210ENST00000496468 ZFYVE28Q9HCC9 887 aa21.32■■□□□ 1
TSSC4-210ENST00000496468 NCOA5Q9HCD5 579 aaKnown RBP21.32■■□□□ 1
TSSC4-210ENST00000496468 SH2B1Q9NRF2 756 aaPredicted RBP21.32■■□□□ 1
TSSC4-210ENST00000496468 HOXC10Q9NYD6 342 aa21.32■■□□□ 1
TSSC4-210ENST00000496468 CEP350Q5VT06 3117 aa21.32■■□□□ 1
TSSC4-210ENST00000496468 ADGRA2Q96PE1 1338 aa21.31■■□□□ 1
TSSC4-210ENST00000496468 CDC27P30260 824 aa21.31■■□□□ 1
TSSC4-210ENST00000496468 SCRN1Q12765 414 aa21.31■■□□□ 1
TSSC4-210ENST00000496468 CRHR2Q13324 411 aa21.31■■□□□ 1
TSSC4-210ENST00000496468 LBX2Q6XYB7 198 aa21.31■■□□□ 1
TSSC4-210ENST00000496468 MB21D1Q8N884 522 aa21.31■■□□□ 1
TSSC4-210ENST00000496468 SPZ1Q9BXG8 430 aa21.31■■□□□ 1
TSSC4-210ENST00000496468 CTDP1Q9Y5B0 961 aaPredicted RBP21.31■■□□□ 1
TSSC4-210ENST00000496468 CNTNAP5Q8WYK1 1306 aa21.3■■□□□ 1
TSSC4-210ENST00000496468 VWA5AO00534 786 aa21.3■■□□□ 1
TSSC4-210ENST00000496468 CPLX1O14810 134 aa21.3■■□□□ 1
TSSC4-210ENST00000496468 CA12O43570 354 aa21.3■■□□□ 1
TSSC4-210ENST00000496468 GCLCP48506 637 aaPredicted RBP21.3■■□□□ 1
TSSC4-210ENST00000496468 CPLX2Q6PUV4 134 aaKnown RBP21.3■■□□□ 1
TSSC4-210ENST00000496468 ADGRF4Q8IZF3 695 aa21.3■■□□□ 1
TSSC4-210ENST00000496468 PAGR1Q9BTK6 254 aa21.3■■□□□ 1
TSSC4-210ENST00000496468 BEGAINQ9BUH8 593 aa21.3■■□□□ 1
TSSC4-210ENST00000496468 FAM217BQ9NTX9 383 aaPredicted RBP21.3■■□□□ 1
TSSC4-210ENST00000496468 SAGE1Q9NXZ1 904 aa21.3■■□□□ 1
TSSC4-210ENST00000496468 ZBED4O75132 1171 aa21.29■■□□□ 1
TSSC4-210ENST00000496468 FDX1P10109 184 aa21.29■■□□□ 1
TSSC4-210ENST00000496468 ADD1P35611 737 aaKnown RBP21.29■■□□□ 1
TSSC4-210ENST00000496468 CDC37Q16543 378 aaPredicted RBP21.29■■□□□ 1
TSSC4-210ENST00000496468 NBPF11Q86T75 865 aa21.29■■□□□ 1
TSSC4-210ENST00000496468 HSCBQ8IWL3 235 aa21.29■■□□□ 1
TSSC4-210ENST00000496468 CMTR1Q8N1G2 835 aaKnown RBP21.29■■□□□ 1
TSSC4-210ENST00000496468 SRBD1Q8N5C6 995 aaKnown RBP21.29■■□□□ 1
TSSC4-210ENST00000496468 NECAB1Q8N987 351 aa21.29■■□□□ 1
TSSC4-210ENST00000496468 RANBP17Q9H2T7 1088 aaKnown RBP21.29■■□□□ 1
TSSC4-210ENST00000496468 SLC38A10Q9HBR0 1119 aa21.29■■□□□ 1
TSSC4-210ENST00000496468 RNF186Q9NXI6 227 aa21.29■■□□□ 1
TSSC4-210ENST00000496468 MYH6P13533 1939 aa21.28■■□□□ 1
TSSC4-210ENST00000496468 CYTH3O43739 400 aa21.28■■□□□ 1
TSSC4-210ENST00000496468 TLR2O60603 784 aa21.28■■□□□ 1
TSSC4-210ENST00000496468 TRPA1O75762 1119 aa21.28■■□□□ 1
TSSC4-210ENST00000496468 CDKL5O76039 1030 aa21.28■■□□□ 1
TSSC4-210ENST00000496468 SMARCA1P28370 1054 aa21.28■■□□□ 1
TSSC4-210ENST00000496468 SLC35G1Q2M3R5 365 aa21.28■■□□□ 1
TSSC4-210ENST00000496468 HOMER1Q86YM7 354 aa21.28■■□□□ 1
TSSC4-210ENST00000496468 CCDC82Q8N4S0 544 aa21.28■■□□□ 1
TSSC4-210ENST00000496468 RIOX1Q9H6W3 641 aa21.28■■□□□ 1
TSSC4-210ENST00000496468 JMJD4Q9H9V9 463 aa21.28■■□□□ 1
TSSC4-210ENST00000496468 ADAMTS5Q9UNA0 930 aa21.28■■□□□ 1
TSSC4-210ENST00000496468 SNAP25P60880 206 aa21.27■■□□□ 1
TSSC4-210ENST00000496468 CCDC174Q6PII3 467 aa21.27■■□□□ 1
TSSC4-210ENST00000496468 CCDC83Q8IWF9 413 aa21.27■■□□□ 1
TSSC4-210ENST00000496468 ANKRD13CQ8N6S4 541 aa21.27■■□□□ 1
TSSC4-210ENST00000496468 REPS2Q8NFH8 660 aa21.27■■□□□ 1
TSSC4-210ENST00000496468 SNX21Q969T3 373 aa21.27■■□□□ 1
TSSC4-210ENST00000496468 RRP36Q96EU6 259 aaKnown RBP21.27■■□□□ 1
TSSC4-210ENST00000496468 TMX3Q96JJ7 454 aa21.27■■□□□ 1
TSSC4-210ENST00000496468 CFHR5Q9BXR6 569 aa21.27■■□□□ 1
TSSC4-210ENST00000496468 VAT1LQ9HCJ6 419 aa21.27■■□□□ 1
TSSC4-210ENST00000496468 SEC63Q9UGP8 760 aaKnown RBP21.27■■□□□ 1
TSSC4-210ENST00000496468 CPA4Q9UI42 421 aa21.27■■□□□ 1
TSSC4-210ENST00000496468 RABGAP1Q9Y3P9 1069 aa21.27■■□□□ 1
TSSC4-210ENST00000496468 CNMDO75829 334 aa21.26■□□□□ 0.99
TSSC4-210ENST00000496468 IFNAR1P17181 557 aa21.26■□□□□ 0.99
TSSC4-210ENST00000496468 FUT2Q10981 343 aa21.26■□□□□ 0.99
TSSC4-210ENST00000496468 ST3GAL1Q11201 340 aa21.26■□□□□ 0.99
TSSC4-210ENST00000496468 TMEM132BQ14DG7 1078 aa21.26■□□□□ 0.99
TSSC4-210ENST00000496468 FAM110CQ1W6H9 321 aa21.26■□□□□ 0.99
TSSC4-210ENST00000496468 PIBF1Q8WXW3 757 aa21.26■□□□□ 0.99
TSSC4-210ENST00000496468 TXNRD2Q9NNW7 524 aa21.26■□□□□ 0.99
TSSC4-210ENST00000496468 BTBD7Q9P203 1132 aa21.26■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms