RNA–Protein interactions for RNA: ENST00000496462.1

U2AF1-212, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 3,973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-212ENST00000496462 FKTNO75072 461 aa9.92□□□□□ -0.82
U2AF1-212ENST00000496462 FOSP01100 380 aaPredicted RBP9.92□□□□□ -0.82
U2AF1-212ENST00000496462 SMARCA1P28370 1054 aa9.92□□□□□ -0.82
U2AF1-212ENST00000496462 GALNT17Q6IS24 598 aa9.92□□□□□ -0.82
U2AF1-212ENST00000496462 TEX2Q8IWB9 1127 aa9.92□□□□□ -0.82
U2AF1-212ENST00000496462 FAM177A1Q8N128 213 aaPredicted RBP9.92□□□□□ -0.82
U2AF1-212ENST00000496462 MKL1Q969V6 931 aa9.92□□□□□ -0.82
U2AF1-212ENST00000496462 SNCAIPQ9Y6H5 919 aa9.92□□□□□ -0.82
U2AF1-212ENST00000496462 FRMPD2Q68DX3 1309 aaPredicted RBP9.92□□□□□ -0.82
U2AF1-212ENST00000496462 BAG4O95429 457 aaKnown RBP9.92□□□□□ -0.82
U2AF1-212ENST00000496462 FCER1AP12319 257 aa9.92□□□□□ -0.82
U2AF1-212ENST00000496462 PRMT2P55345 433 aa9.92□□□□□ -0.82
U2AF1-212ENST00000496462 UBXN2AP68543 259 aa9.92□□□□□ -0.82
U2AF1-212ENST00000496462 ENAHQ8N8S7 591 aaPredicted RBP9.92□□□□□ -0.82
U2AF1-212ENST00000496462 CHST13Q8NET6 341 aa9.92□□□□□ -0.82
U2AF1-212ENST00000496462 TCEANC2Q96MN5 208 aa9.92□□□□□ -0.82
U2AF1-212ENST00000496462 MROH8Q9H579 483 aa9.92□□□□□ -0.82
U2AF1-212ENST00000496462 VPS37CA5D8V6 355 aaPredicted RBP9.92□□□□□ -0.82
U2AF1-212ENST00000496462 GCOM1H8Y6P7 765 aaPredicted RBP9.92□□□□□ -0.82
U2AF1-212ENST00000496462 POLR2MP0CAP2 368 aa9.92□□□□□ -0.82
U2AF1-212ENST00000496462 GRM4Q14833 912 aa9.92□□□□□ -0.82
U2AF1-212ENST00000496462 MFSD14CQ5VZR4 134 aa9.92□□□□□ -0.82
U2AF1-212ENST00000496462 KCTD1Q719H9 257 aa9.92□□□□□ -0.82
U2AF1-212ENST00000496462 RASAL3Q86YV0 1011 aa9.92□□□□□ -0.82
U2AF1-212ENST00000496462 CCDC83Q8IWF9 413 aa9.92□□□□□ -0.82
U2AF1-212ENST00000496462 SAMD3Q8N6K7 520 aa9.92□□□□□ -0.82
U2AF1-212ENST00000496462 RAET1EQ8TD07 263 aa9.92□□□□□ -0.82
U2AF1-212ENST00000496462 ZNF384Q8TF68 577 aa9.92□□□□□ -0.82
U2AF1-212ENST00000496462 CNPY2Q9Y2B0 182 aa9.92□□□□□ -0.82
U2AF1-212ENST00000496462 APOA5Q6Q788 366 aa9.91□□□□□ -0.82
U2AF1-212ENST00000496462 NBPF11Q86T75 865 aa9.91□□□□□ -0.82
U2AF1-212ENST00000496462 SGMS1Q86VZ5 419 aa9.91□□□□□ -0.82
U2AF1-212ENST00000496462 TNPO1Q92973 898 aaKnown RBP9.91□□□□□ -0.82
U2AF1-212ENST00000496462 CLMNQ96JQ2 1002 aa9.91□□□□□ -0.82
U2AF1-212ENST00000496462 ACAD9Q9H845 621 aa9.91□□□□□ -0.82
U2AF1-212ENST00000496462 ADCY7P51828 1080 aa9.91□□□□□ -0.82
U2AF1-212ENST00000496462 OAZ1P54368 228 aa9.91□□□□□ -0.82
U2AF1-212ENST00000496462 AK2P54819 239 aa9.91□□□□□ -0.82
U2AF1-212ENST00000496462 NUCB2P80303 420 aa9.91□□□□□ -0.82
U2AF1-212ENST00000496462 LARP1BQ659C4 914 aaKnown RBP9.91□□□□□ -0.82
U2AF1-212ENST00000496462 SH3BP5LQ7L8J4 393 aa9.91□□□□□ -0.82
U2AF1-212ENST00000496462 METTL16Q86W50 562 aaKnown RBP9.91□□□□□ -0.82
U2AF1-212ENST00000496462 ZNF396Q96N95 335 aaPredicted RBP9.91□□□□□ -0.82
U2AF1-212ENST00000496462 WBP1LQ9NX94 342 aa9.91□□□□□ -0.82
U2AF1-212ENST00000496462 KCNH4Q9UQ05 1017 aa9.91□□□□□ -0.82
U2AF1-212ENST00000496462 POLR2AP24928 1970 aaKnown RBP9.91□□□□□ -0.82
U2AF1-212ENST00000496462 PNMA6FA0A0J9YX94 578 aa9.91□□□□□ -0.82
U2AF1-212ENST00000496462 VCAM1P19320 739 aa9.91□□□□□ -0.82
U2AF1-212ENST00000496462 ZNF543Q08ER8 600 aa9.91□□□□□ -0.82
U2AF1-212ENST00000496462 GNPTABQ3T906 1256 aa9.91□□□□□ -0.82
U2AF1-212ENST00000496462 ANKS1AQ92625 1134 aa9.91□□□□□ -0.82
U2AF1-212ENST00000496462 NUDT12Q9BQG2 462 aa9.91□□□□□ -0.82
U2AF1-212ENST00000496462 RAB34Q9BZG1 259 aa9.91□□□□□ -0.82
U2AF1-212ENST00000496462 CEP131Q9UPN4 1083 aa9.91□□□□□ -0.82
U2AF1-212ENST00000496462 PCDHA1Q9Y5I3 950 aa9.91□□□□□ -0.82
U2AF1-212ENST00000496462 GNRH1P01148 92 aa9.9□□□□□ -0.82
U2AF1-212ENST00000496462 MAP3K10Q02779 954 aa9.9□□□□□ -0.82
U2AF1-212ENST00000496462 SNRNP48Q6IEG0 339 aaKnown RBP9.9□□□□□ -0.82
U2AF1-212ENST00000496462 NLRX1Q86UT6 975 aa9.9□□□□□ -0.82
U2AF1-212ENST00000496462 ACER1Q8TDN7 264 aa9.9□□□□□ -0.82
U2AF1-212ENST00000496462 C12orf42Q96LP6 360 aa9.9□□□□□ -0.82
U2AF1-212ENST00000496462 ALG1Q9BT22 464 aa9.9□□□□□ -0.82
U2AF1-212ENST00000496462 AFG3L2Q9Y4W6 797 aa9.9□□□□□ -0.82
U2AF1-212ENST00000496462 ECM2O94769 699 aaPredicted RBP9.9□□□□□ -0.82
U2AF1-212ENST00000496462 CHGBP05060 677 aa9.9□□□□□ -0.82
U2AF1-212ENST00000496462 HERVK_113P62684 666 aa9.9□□□□□ -0.82
U2AF1-212ENST00000496462 SP3Q02447 781 aa9.9□□□□□ -0.82
U2AF1-212ENST00000496462 ZRSR1Q15695 479 aaKnown RBP9.9□□□□□ -0.82
U2AF1-212ENST00000496462 CDC37Q16543 378 aaPredicted RBP9.9□□□□□ -0.82
U2AF1-212ENST00000496462 RNF26Q9BY78 433 aaPredicted RBP9.9□□□□□ -0.82
U2AF1-212ENST00000496462 EFCC1Q9HA90 598 aa9.9□□□□□ -0.82
U2AF1-212ENST00000496462 HOMER2Q9NSB8 354 aa9.9□□□□□ -0.82
U2AF1-212ENST00000496462 PPP1R9AQ9ULJ8 1098 aa9.9□□□□□ -0.82
U2AF1-212ENST00000496462 V9GY48 417 aaPredicted RBP9.9□□□□□ -0.82
U2AF1-212ENST00000496462 A0A0G2JLL6 359 aaPredicted RBP9.9□□□□□ -0.82
U2AF1-212ENST00000496462 STRNO43815 780 aa9.9□□□□□ -0.82
U2AF1-212ENST00000496462 SH3D19Q5HYK7 790 aa9.9□□□□□ -0.82
U2AF1-212ENST00000496462 PPP1R18Q6NYC8 613 aa9.9□□□□□ -0.82
U2AF1-212ENST00000496462 PRRT2Q7Z6L0 340 aaPredicted RBP9.9□□□□□ -0.82
U2AF1-212ENST00000496462 CDAN1Q8IWY9 1227 aa9.9□□□□□ -0.82
U2AF1-212ENST00000496462 SOCS4Q8WXH5 440 aa9.9□□□□□ -0.82
U2AF1-212ENST00000496462 MMP19Q99542 508 aa9.9□□□□□ -0.82
U2AF1-212ENST00000496462 ASB14A6NK59 587 aa9.9□□□□□ -0.83
U2AF1-212ENST00000496462 ZBTB5O15062 677 aa9.9□□□□□ -0.83
U2AF1-212ENST00000496462 FGRP09769 529 aa9.9□□□□□ -0.83
U2AF1-212ENST00000496462 DSG3P32926 999 aa9.9□□□□□ -0.83
U2AF1-212ENST00000496462 RGS2P41220 211 aa9.9□□□□□ -0.83
U2AF1-212ENST00000496462 USH1GQ495M9 461 aa9.9□□□□□ -0.83
U2AF1-212ENST00000496462 RAB11FIP4Q86YS3 637 aa9.9□□□□□ -0.83
U2AF1-212ENST00000496462 UBA5Q9GZZ9 404 aa9.9□□□□□ -0.83
U2AF1-212ENST00000496462 MAF1Q9H063 256 aa9.9□□□□□ -0.83
U2AF1-212ENST00000496462 ALDH8A1Q9H2A2 487 aaPredicted RBP9.9□□□□□ -0.83
U2AF1-212ENST00000496462 PFASO15067 1338 aa9.89□□□□□ -0.83
U2AF1-212ENST00000496462 BMP15O95972 392 aa9.89□□□□□ -0.83
U2AF1-212ENST00000496462 CFBP00751 764 aa9.89□□□□□ -0.83
U2AF1-212ENST00000496462 PDE4DQ08499 809 aa9.89□□□□□ -0.83
U2AF1-212ENST00000496462 PLEKHH3Q7Z736 793 aa9.89□□□□□ -0.83
U2AF1-212ENST00000496462 RASEFQ8IZ41 740 aa9.89□□□□□ -0.83
U2AF1-212ENST00000496462 ASCC2Q9H1I8 757 aaPredicted RBP9.89□□□□□ -0.83
U2AF1-212ENST00000496462 RNF146Q9NTX7 359 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms