RNA–Protein interactions for RNA: ENST00000496262.1

RNF220-217, Transcript of ring finger protein 220, humanhuman

TSL 2

Gene RNF220, Length 840 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-217ENST00000496262 LRIT3Q3SXY7 679 aa12.98□□□□□ -0.33
RNF220-217ENST00000496262 TRIM60Q495X7 471 aa12.98□□□□□ -0.33
RNF220-217ENST00000496262 LRRC47Q8N1G4 583 aaKnown RBP12.98□□□□□ -0.33
RNF220-217ENST00000496262 REPS2Q8NFH8 660 aa12.98□□□□□ -0.33
RNF220-217ENST00000496262 KIFC2Q96AC6 838 aa12.98□□□□□ -0.33
RNF220-217ENST00000496262 TINF2Q9BSI4 451 aa12.98□□□□□ -0.33
RNF220-217ENST00000496262 XPNPEP3Q9NQH7 507 aa12.98□□□□□ -0.33
RNF220-217ENST00000496262 NYAP2Q9P242 653 aa12.98□□□□□ -0.33
RNF220-217ENST00000496262 RIPK3Q9Y572 518 aa12.98□□□□□ -0.33
RNF220-217ENST00000496262 TTC41PQ6P2S7 1318 aa12.97□□□□□ -0.33
RNF220-217ENST00000496262 PATL2C9JE40 543 aaKnown RBP12.97□□□□□ -0.33
RNF220-217ENST00000496262 ERC2O15083 957 aa12.97□□□□□ -0.33
RNF220-217ENST00000496262 PGK1P00558 417 aa12.97□□□□□ -0.33
RNF220-217ENST00000496262 TSPY3P0CV98 308 aa12.97□□□□□ -0.33
RNF220-217ENST00000496262 TSPY8P0CW00 308 aa12.97□□□□□ -0.33
RNF220-217ENST00000496262 RARBP10826 455 aa12.97□□□□□ -0.33
RNF220-217ENST00000496262 HOXD11P31277 338 aaPredicted RBP12.97□□□□□ -0.33
RNF220-217ENST00000496262 LRRFIP1Q32MZ4 808 aaKnown RBP12.97□□□□□ -0.33
RNF220-217ENST00000496262 ZNF792Q3KQV3 632 aa12.97□□□□□ -0.33
RNF220-217ENST00000496262 SLC39A5Q6ZMH5 540 aa12.97□□□□□ -0.33
RNF220-217ENST00000496262 IFNL3Q8IZI9 196 aa12.97□□□□□ -0.33
RNF220-217ENST00000496262 SLC17A8Q8NDX2 589 aa12.97□□□□□ -0.33
RNF220-217ENST00000496262 PI4K2BQ8TCG2 481 aa12.97□□□□□ -0.33
RNF220-217ENST00000496262 CEP95Q96GE4 821 aa12.97□□□□□ -0.33
RNF220-217ENST00000496262 TEX13BQ9BXU2 312 aa12.97□□□□□ -0.33
RNF220-217ENST00000496262 NACAP1Q9BZK3 213 aa12.97□□□□□ -0.33
RNF220-217ENST00000496262 NAPBQ9H115 298 aa12.97□□□□□ -0.33
RNF220-217ENST00000496262 ZNF287Q9HBT7 754 aa12.97□□□□□ -0.33
RNF220-217ENST00000496262 RAVER2Q9HCJ3 691 aaKnown RBP12.97□□□□□ -0.33
RNF220-217ENST00000496262 CNPY2Q9Y2B0 182 aa12.97□□□□□ -0.33
RNF220-217ENST00000496262 COL6A3P12111 3177 aa12.96□□□□□ -0.33
RNF220-217ENST00000496262 GREB1LQ9C091 1923 aaPredicted RBP12.96□□□□□ -0.33
RNF220-217ENST00000496262 IGKV6D-41A0A0C4DH26 115 aa12.96□□□□□ -0.33
RNF220-217ENST00000496262 ZBED4O75132 1171 aa12.96□□□□□ -0.33
RNF220-217ENST00000496262 MX1P20591 662 aa12.96□□□□□ -0.33
RNF220-217ENST00000496262 COPB2P35606 906 aa12.96□□□□□ -0.33
RNF220-217ENST00000496262 CCDC129Q6ZRS4 1044 aa12.96□□□□□ -0.33
RNF220-217ENST00000496262 PRPF38AQ8NAV1 312 aaKnown RBP12.96□□□□□ -0.33
RNF220-217ENST00000496262 DDX11Q96FC9 970 aa12.96□□□□□ -0.33
RNF220-217ENST00000496262 HOMER2Q9NSB8 354 aa12.96□□□□□ -0.33
RNF220-217ENST00000496262 ZHX1Q9UKY1 873 aaPredicted RBP12.96□□□□□ -0.33
RNF220-217ENST00000496262 TTLL1O95922 423 aa12.95□□□□□ -0.34
RNF220-217ENST00000496262 ZNF865P0CJ78 1059 aaPredicted RBP12.95□□□□□ -0.34
RNF220-217ENST00000496262 PDE4BQ07343 736 aa12.95□□□□□ -0.34
RNF220-217ENST00000496262 PPARAQ07869 468 aa12.95□□□□□ -0.34
RNF220-217ENST00000496262 IKQ13123 557 aaPredicted RBP12.95□□□□□ -0.34
RNF220-217ENST00000496262 CENPQQ7L2Z9 268 aaPredicted RBP12.95□□□□□ -0.34
RNF220-217ENST00000496262 SH3RF1Q7Z6J0 888 aa12.95□□□□□ -0.34
RNF220-217ENST00000496262 MTMR4Q9NYA4 1195 aa12.95□□□□□ -0.34
RNF220-217ENST00000496262 NRBP1Q9UHY1 535 aa12.95□□□□□ -0.34
RNF220-217ENST00000496262 LAMA2P24043 3122 aaKnown RBP12.94□□□□□ -0.34
RNF220-217ENST00000496262 SLC3A2P08195 630 aaKnown RBP12.94□□□□□ -0.34
RNF220-217ENST00000496262 AKR1A1P14550 325 aa12.94□□□□□ -0.34
RNF220-217ENST00000496262 TFAP4Q01664 338 aa12.94□□□□□ -0.34
RNF220-217ENST00000496262 CTDSPL2Q05D32 466 aa12.94□□□□□ -0.34
RNF220-217ENST00000496262 ZMYM1Q5SVZ6 1142 aa12.94□□□□□ -0.34
RNF220-217ENST00000496262 SLFN13Q68D06 897 aa12.94□□□□□ -0.34
RNF220-217ENST00000496262 GPR153Q6NV75 609 aa12.94□□□□□ -0.34
RNF220-217ENST00000496262 RNF180Q86T96 592 aa12.94□□□□□ -0.34
RNF220-217ENST00000496262 ANKRD35Q8N283 1001 aa12.94□□□□□ -0.34
RNF220-217ENST00000496262 BADQ92934 168 aa12.94□□□□□ -0.34
RNF220-217ENST00000496262 FAM161BQ96MY7 647 aa12.94□□□□□ -0.34
RNF220-217ENST00000496262 PDLIM7Q9NR12 457 aa12.94□□□□□ -0.34
RNF220-217ENST00000496262 MTMR7Q9Y216 660 aa12.94□□□□□ -0.34
RNF220-217ENST00000496262 DIS3Q9Y2L1 958 aaKnown RBP12.94□□□□□ -0.34
RNF220-217ENST00000496262 A0A1W2PQ45 241 aaPredicted RBP12.93□□□□□ -0.34
RNF220-217ENST00000496262 A0A1W2PQY0 241 aa12.93□□□□□ -0.34
RNF220-217ENST00000496262 TRIM43BA6NCK2 446 aa12.93□□□□□ -0.34
RNF220-217ENST00000496262 TMEM232C9JQI7 657 aa12.93□□□□□ -0.34
RNF220-217ENST00000496262 PQBP1O60828 265 aaKnown RBP12.93□□□□□ -0.34
RNF220-217ENST00000496262 BMP3P12645 472 aa12.93□□□□□ -0.34
RNF220-217ENST00000496262 TLE2Q04725 743 aa12.93□□□□□ -0.34
RNF220-217ENST00000496262 SNX17Q15036 470 aa12.93□□□□□ -0.34
RNF220-217ENST00000496262 ANKRD45Q5TZF3 282 aa12.93□□□□□ -0.34
RNF220-217ENST00000496262 GMCL1P1Q8NEA9 526 aa12.93□□□□□ -0.34
RNF220-217ENST00000496262 NEDD1Q8NHV4 660 aa12.93□□□□□ -0.34
RNF220-217ENST00000496262 TRIM43Q96BQ3 446 aaPredicted RBP12.93□□□□□ -0.34
RNF220-217ENST00000496262 SLC38A10Q9HBR0 1119 aa12.93□□□□□ -0.34
RNF220-217ENST00000496262 INCENPQ9NQS7 918 aa12.93□□□□□ -0.34
RNF220-217ENST00000496262 FEM1BQ9UK73 627 aa12.93□□□□□ -0.34
RNF220-217ENST00000496262 STX8Q9UNK0 236 aa12.93□□□□□ -0.34
RNF220-217ENST00000496262 PHF24Q9UPV7 400 aa12.93□□□□□ -0.34
RNF220-217ENST00000496262 SYNRGQ9UMZ2 1314 aa12.92□□□□□ -0.34
RNF220-217ENST00000496262 NMT2O60551 498 aa12.92□□□□□ -0.34
RNF220-217ENST00000496262 SNAI1O95863 264 aaPredicted RBP12.92□□□□□ -0.34
RNF220-217ENST00000496262 SNAP25P60880 206 aa12.92□□□□□ -0.34
RNF220-217ENST00000496262 SHHQ15465 462 aa12.92□□□□□ -0.34
RNF220-217ENST00000496262 C9orf50Q5SZB4 431 aa12.92□□□□□ -0.34
RNF220-217ENST00000496262 RASGRP2Q7LDG7 609 aa12.92□□□□□ -0.34
RNF220-217ENST00000496262 MKL1Q969V6 931 aa12.92□□□□□ -0.34
RNF220-217ENST00000496262 MTMR10Q9NXD2 777 aa12.92□□□□□ -0.34
RNF220-217ENST00000496262 PLXNA1Q9UIW2 1896 aa12.92□□□□□ -0.34
RNF220-217ENST00000496262 LTBP2Q14767 1821 aa12.92□□□□□ -0.34
RNF220-217ENST00000496262 PLIN4Q96Q06 1357 aa12.92□□□□□ -0.34
RNF220-217ENST00000496262 SYNGAP1Q96PV0 1343 aa12.91□□□□□ -0.34
RNF220-217ENST00000496262 DNAJC25-GNG10A0A024R161 153 aa12.91□□□□□ -0.34
RNF220-217ENST00000496262 MYADML2A6NDP7 307 aa12.91□□□□□ -0.34
RNF220-217ENST00000496262 TSPY2A6NKD2 308 aa12.91□□□□□ -0.34
RNF220-217ENST00000496262 ATP2A1O14983 1001 aa12.91□□□□□ -0.34
RNF220-217ENST00000496262 FOXP2O15409 715 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms