RNA–Protein interactions for RNA: ENST00000496116.1

CMSS1-208, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 1 (best)

Gene CMSS1, Length 2,145 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-208ENST00000496116 STAT6P42226 847 aa12.53□□□□□ -0.4
CMSS1-208ENST00000496116 RHBDL3P58872 404 aa12.53□□□□□ -0.4
CMSS1-208ENST00000496116 NCBP1Q09161 790 aaKnown RBP12.53□□□□□ -0.4
CMSS1-208ENST00000496116 SP8Q8IXZ3 490 aa12.53□□□□□ -0.4
CMSS1-208ENST00000496116 RASGRP4Q8TDF6 673 aa12.53□□□□□ -0.4
CMSS1-208ENST00000496116 RRP36Q96EU6 259 aaKnown RBP12.53□□□□□ -0.4
CMSS1-208ENST00000496116 CCDC94Q9BW85 323 aaPredicted RBP12.53□□□□□ -0.4
CMSS1-208ENST00000496116 ZMYND12Q9H0C1 365 aa12.53□□□□□ -0.4
CMSS1-208ENST00000496116 SUGT1Q9Y2Z0 365 aa12.53□□□□□ -0.4
CMSS1-208ENST00000496116 LRRC37AA6NMS7 1700 aa12.53□□□□□ -0.4
CMSS1-208ENST00000496116 GOLGA6L9A6NEM1 432 aa12.53□□□□□ -0.4
CMSS1-208ENST00000496116 PPEF1O14829 653 aaPredicted RBP12.53□□□□□ -0.4
CMSS1-208ENST00000496116 ADAMTS3O15072 1205 aa12.53□□□□□ -0.4
CMSS1-208ENST00000496116 MYL1P05976 194 aa12.53□□□□□ -0.4
CMSS1-208ENST00000496116 NAPAP54920 295 aa12.53□□□□□ -0.4
CMSS1-208ENST00000496116 STX17P56962 302 aa12.53□□□□□ -0.4
CMSS1-208ENST00000496116 INF2Q27J81 1249 aa12.53□□□□□ -0.4
CMSS1-208ENST00000496116 CDKAL1Q5VV42 579 aa12.53□□□□□ -0.4
CMSS1-208ENST00000496116 RASSF8Q8NHQ8 419 aa12.53□□□□□ -0.4
CMSS1-208ENST00000496116 ERO1AQ96HE7 468 aa12.53□□□□□ -0.4
CMSS1-208ENST00000496116 COA1Q9GZY4 146 aa12.53□□□□□ -0.4
CMSS1-208ENST00000496116 BLZF1Q9H2G9 400 aa12.53□□□□□ -0.4
CMSS1-208ENST00000496116 C6orf50Q9HD87 102 aa12.53□□□□□ -0.4
CMSS1-208ENST00000496116 DISC1Q9NRI5 854 aa12.53□□□□□ -0.4
CMSS1-208ENST00000496116 FOCADQ5VW36 1801 aa12.53□□□□□ -0.4
CMSS1-208ENST00000496116 SLU7O95391 586 aaKnown RBP12.52□□□□□ -0.4
CMSS1-208ENST00000496116 GOLGA8HP0CJ92 632 aa12.52□□□□□ -0.4
CMSS1-208ENST00000496116 PRPHP41219 470 aa12.52□□□□□ -0.4
CMSS1-208ENST00000496116 DDR1Q08345 913 aa12.52□□□□□ -0.4
CMSS1-208ENST00000496116 SOGA3Q5TF21 947 aa12.52□□□□□ -0.4
CMSS1-208ENST00000496116 ZNF658Q5TYW1 1059 aaPredicted RBP12.52□□□□□ -0.4
CMSS1-208ENST00000496116 RRAGBQ5VZM2 374 aa12.52□□□□□ -0.4
CMSS1-208ENST00000496116 SYT10Q6XYQ8 523 aa12.52□□□□□ -0.4
CMSS1-208ENST00000496116 KRT25Q7Z3Z0 450 aa12.52□□□□□ -0.4
CMSS1-208ENST00000496116 TMEM139Q8IV31 216 aa12.52□□□□□ -0.4
CMSS1-208ENST00000496116 SMYD4Q8IYR2 804 aaPredicted RBP12.52□□□□□ -0.4
CMSS1-208ENST00000496116 ANKRD20A12PQ8NF67 263 aa12.52□□□□□ -0.4
CMSS1-208ENST00000496116 STAMQ92783 540 aa12.52□□□□□ -0.4
CMSS1-208ENST00000496116 RWDD2AQ9UIY3 292 aa12.52□□□□□ -0.4
CMSS1-208ENST00000496116 PHLPP2Q6ZVD8 1323 aa12.52□□□□□ -0.41
CMSS1-208ENST00000496116 hCG_1984214I3L0E3 225 aa12.52□□□□□ -0.41
CMSS1-208ENST00000496116 RPN1P04843 607 aaKnown RBP12.52□□□□□ -0.41
CMSS1-208ENST00000496116 UBA7P41226 1012 aa12.52□□□□□ -0.41
CMSS1-208ENST00000496116 ETF1P62495 437 aaKnown RBP12.52□□□□□ -0.41
CMSS1-208ENST00000496116 GTF2IP78347 998 aa12.52□□□□□ -0.41
CMSS1-208ENST00000496116 SPAG1Q07617 926 aa12.52□□□□□ -0.41
CMSS1-208ENST00000496116 PTPN21Q16825 1174 aa12.52□□□□□ -0.41
CMSS1-208ENST00000496116 SLC35G1Q2M3R5 365 aa12.52□□□□□ -0.41
CMSS1-208ENST00000496116 ZNF713Q8N859 430 aaPredicted RBP12.52□□□□□ -0.41
CMSS1-208ENST00000496116 TC2NQ8N9U0 490 aa12.52□□□□□ -0.41
CMSS1-208ENST00000496116 CEP95Q96GE4 821 aa12.52□□□□□ -0.41
CMSS1-208ENST00000496116 CTNND2Q9UQB3 1225 aa12.52□□□□□ -0.41
CMSS1-208ENST00000496116 LTBP1Q14766 1721 aa12.51□□□□□ -0.41
CMSS1-208ENST00000496116 AKR1B15C9JRZ8 316 aaPredicted RBP12.51□□□□□ -0.41
CMSS1-208ENST00000496116 ADKP55263 362 aaKnown RBP12.51□□□□□ -0.41
CMSS1-208ENST00000496116 GOLGA8FQ08AF8 430 aa12.51□□□□□ -0.41
CMSS1-208ENST00000496116 GOLGA8DPQ0D2H9 430 aa12.51□□□□□ -0.41
CMSS1-208ENST00000496116 PAK1Q13153 545 aa12.51□□□□□ -0.41
CMSS1-208ENST00000496116 SEMA3FQ13275 785 aa12.51□□□□□ -0.41
CMSS1-208ENST00000496116 KARSQ15046 597 aaKnown RBP12.51□□□□□ -0.41
CMSS1-208ENST00000496116 NONOQ15233 471 aaKnown RBP eCLIP12.51□□□□□ -0.417e-9■■□□□ 12.4
CMSS1-208ENST00000496116 PPFIBP1Q86W92 1011 aa12.51□□□□□ -0.41
CMSS1-208ENST00000496116 AK8Q96MA6 479 aa12.51□□□□□ -0.41
CMSS1-208ENST00000496116 CCSER1Q9C0I3 900 aa12.51□□□□□ -0.41
CMSS1-208ENST00000496116 QTRT2Q9H974 415 aaKnown RBP12.51□□□□□ -0.41
CMSS1-208ENST00000496116 CGNQ9P2M7 1197 aaKnown RBP12.51□□□□□ -0.41
CMSS1-208ENST00000496116 ADD3Q9UEY8 706 aaKnown RBP12.51□□□□□ -0.41
CMSS1-208ENST00000496116 DAGLAQ9Y4D2 1042 aa12.51□□□□□ -0.41
CMSS1-208ENST00000496116 SMCO2A6NFE2 343 aa12.5□□□□□ -0.41
CMSS1-208ENST00000496116 NOVP48745 357 aa12.5□□□□□ -0.41
CMSS1-208ENST00000496116 USP17L2Q6R6M4 530 aa12.5□□□□□ -0.41
CMSS1-208ENST00000496116 APTXQ7Z2E3 356 aaKnown RBP12.5□□□□□ -0.41
CMSS1-208ENST00000496116 PANX2Q96RD6 677 aa12.5□□□□□ -0.41
CMSS1-208ENST00000496116 MTRQ99707 1265 aa12.5□□□□□ -0.41
CMSS1-208ENST00000496116 NAA15Q9BXJ9 866 aaKnown RBP12.5□□□□□ -0.41
CMSS1-208ENST00000496116 ZC3H12CQ9C0D7 883 aaKnown RBP12.5□□□□□ -0.41
CMSS1-208ENST00000496116 CUEDC2Q9H467 287 aa12.5□□□□□ -0.41
CMSS1-208ENST00000496116 L2HGDHQ9H9P8 463 aa12.5□□□□□ -0.41
CMSS1-208ENST00000496116 MAGEF1Q9HAY2 307 aa12.5□□□□□ -0.41
CMSS1-208ENST00000496116 ZNF215Q9UL58 517 aaPredicted RBP12.5□□□□□ -0.41
CMSS1-208ENST00000496116 PPP2R2CQ9Y2T4 447 aa12.5□□□□□ -0.41
CMSS1-208ENST00000496116 ATP6V0A2Q9Y487 856 aa12.5□□□□□ -0.41
CMSS1-208ENST00000496116 PLIN4Q96Q06 1357 aa12.5□□□□□ -0.41
CMSS1-208ENST00000496116 TRIM37O94972 964 aa12.5□□□□□ -0.41
CMSS1-208ENST00000496116 TPM1P09493 284 aa12.5□□□□□ -0.41
CMSS1-208ENST00000496116 CDC25AP30304 524 aa12.5□□□□□ -0.41
CMSS1-208ENST00000496116 ORC2Q13416 577 aaPredicted RBP12.5□□□□□ -0.41
CMSS1-208ENST00000496116 PPP4R3BQ5MIZ7 849 aa12.5□□□□□ -0.41
CMSS1-208ENST00000496116 KRT27Q7Z3Y8 459 aa12.5□□□□□ -0.41
CMSS1-208ENST00000496116 IGSF22Q8N9C0 903 aa12.5□□□□□ -0.41
CMSS1-208ENST00000496116 TMX4Q9H1E5 349 aaPredicted RBP12.5□□□□□ -0.41
CMSS1-208ENST00000496116 TMEM60Q9H2L4 133 aa12.5□□□□□ -0.41
CMSS1-208ENST00000496116 RIMBP2O15034 1052 aa12.49□□□□□ -0.41
CMSS1-208ENST00000496116 CCNT1O60563 726 aaKnown RBP12.49□□□□□ -0.41
CMSS1-208ENST00000496116 OR52Z1P0C646 297 aa12.49□□□□□ -0.41
CMSS1-208ENST00000496116 PICALMQ13492 652 aa12.49□□□□□ -0.41
CMSS1-208ENST00000496116 KCNB1Q14721 858 aa12.49□□□□□ -0.41
CMSS1-208ENST00000496116 NEK8Q86SG6 692 aa12.49□□□□□ -0.41
CMSS1-208ENST00000496116 REXO1L1PQ8IX06 675 aa12.49□□□□□ -0.41
CMSS1-208ENST00000496116 NELFBQ8WX92 580 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms