RNA–Protein interactions for RNA: ENST00000495835.1

HLA-C-209, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,073 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-209ENST00000495835 PLA2G6O60733 806 aa28.68■■■□□ 2.18
HLA-C-209ENST00000495835 CYP2C19P33261 490 aa28.68■■■□□ 2.18
HLA-C-209ENST00000495835 OAZ1P54368 228 aa28.68■■■□□ 2.18
HLA-C-209ENST00000495835 LRRC47Q8N1G4 583 aaKnown RBP28.68■■■□□ 2.18
HLA-C-209ENST00000495835 DIS3LQ8TF46 1054 aaKnown RBP28.68■■■□□ 2.18
HLA-C-209ENST00000495835 CHURC1Q8WUH1 139 aa28.68■■■□□ 2.18
HLA-C-209ENST00000495835 MAML3Q96JK9 1138 aa28.68■■■□□ 2.18
HLA-C-209ENST00000495835 C11orf49Q9H6J7 331 aa28.68■■■□□ 2.18
HLA-C-209ENST00000495835 SLC38A10Q9HBR0 1119 aa28.68■■■□□ 2.18
HLA-C-209ENST00000495835 IL17RBQ9NRM6 502 aa28.68■■■□□ 2.18
HLA-C-209ENST00000495835 DDX20Q9UHI6 824 aaKnown RBP28.68■■■□□ 2.18
HLA-C-209ENST00000495835 NRBP1Q9UHY1 535 aa28.68■■■□□ 2.18
HLA-C-209ENST00000495835 CTDP1Q9Y5B0 961 aaPredicted RBP28.68■■■□□ 2.18
HLA-C-209ENST00000495835 RANBP6O60518 1105 aaKnown RBP28.67■■■□□ 2.18
HLA-C-209ENST00000495835 CYBAP13498 195 aa28.67■■■□□ 2.18
HLA-C-209ENST00000495835 DHX30Q7L2E3 1194 aaKnown RBP eCLIP28.67■■■□□ 2.18
HLA-C-209ENST00000495835 TCP11L1Q9NUJ3 509 aa28.67■■■□□ 2.18
HLA-C-209ENST00000495835 STX8Q9UNK0 236 aa28.67■■■□□ 2.18
HLA-C-209ENST00000495835 HABP4Q5JVS0 413 aaKnown RBP28.66■■■□□ 2.18
HLA-C-209ENST00000495835 FAM160B2Q86V87 743 aa28.66■■■□□ 2.18
HLA-C-209ENST00000495835 DIAPH3Q9NSV4 1193 aa28.66■■■□□ 2.18
HLA-C-209ENST00000495835 FRMPD3Q5JV73 1810 aa28.66■■■□□ 2.18
HLA-C-209ENST00000495835 STAT2P52630 851 aa28.65■■■□□ 2.18
HLA-C-209ENST00000495835 SNRNP48Q6IEG0 339 aaKnown RBP28.65■■■□□ 2.18
HLA-C-209ENST00000495835 KIFC2Q96AC6 838 aa28.65■■■□□ 2.18
HLA-C-209ENST00000495835 INCENPQ9NQS7 918 aa28.65■■■□□ 2.18
HLA-C-209ENST00000495835 TACC3Q9Y6A5 838 aa28.65■■■□□ 2.18
HLA-C-209ENST00000495835 PLXNA1Q9UIW2 1896 aa28.64■■■□□ 2.18
HLA-C-209ENST00000495835 COL6A1P12109 1028 aa28.64■■■□□ 2.18
HLA-C-209ENST00000495835 CNGA1P29973 690 aa28.64■■■□□ 2.18
HLA-C-209ENST00000495835 SLC1A4P43007 532 aa28.64■■■□□ 2.18
HLA-C-209ENST00000495835 ZNF792Q3KQV3 632 aa28.64■■■□□ 2.18
HLA-C-209ENST00000495835 RCSD1Q6JBY9 416 aa28.64■■■□□ 2.18
HLA-C-209ENST00000495835 STAG1Q8WVM7 1258 aa28.64■■■□□ 2.18
HLA-C-209ENST00000495835 RNF41Q9H4P4 317 aaPredicted RBP28.64■■■□□ 2.18
HLA-C-209ENST00000495835 FBXO40Q9UH90 709 aa28.64■■■□□ 2.18
HLA-C-209ENST00000495835 TMEM232C9JQI7 657 aa28.63■■■□□ 2.17
HLA-C-209ENST00000495835 SEPT4O43236 478 aa28.63■■■□□ 2.17
HLA-C-209ENST00000495835 MSL3Q8N5Y2 521 aaKnown RBP28.63■■■□□ 2.17
HLA-C-209ENST00000495835 TRPV1Q8NER1 839 aa28.63■■■□□ 2.17
HLA-C-209ENST00000495835 AKNAD1Q5T1N1 836 aa28.62■■■□□ 2.17
HLA-C-209ENST00000495835 CWC27Q6UX04 472 aaKnown RBP28.62■■■□□ 2.17
HLA-C-209ENST00000495835 MFSD6Q6ZSS7 791 aa28.62■■■□□ 2.17
HLA-C-209ENST00000495835 CHST13Q8NET6 341 aa28.62■■■□□ 2.17
HLA-C-209ENST00000495835 TTC14Q96N46 770 aa28.62■■■□□ 2.17
HLA-C-209ENST00000495835 TINF2Q9BSI4 451 aa28.62■■■□□ 2.17
HLA-C-209ENST00000495835 TOMM22Q9NS69 142 aa28.62■■■□□ 2.17
HLA-C-209ENST00000495835 COLQQ9Y215 455 aaPredicted RBP28.62■■■□□ 2.17
HLA-C-209ENST00000495835 ALPK3Q96L96 1907 aa28.62■■■□□ 2.17
HLA-C-209ENST00000495835 MCCP23508 829 aa28.61■■■□□ 2.17
HLA-C-209ENST00000495835 CPXCR1Q8N123 301 aa28.61■■■□□ 2.17
HLA-C-209ENST00000495835 RIPK3Q9Y572 518 aa28.61■■■□□ 2.17
HLA-C-209ENST00000495835 ZNF213O14771 459 aa28.6■■■□□ 2.17
HLA-C-209ENST00000495835 NMT2O60551 498 aa28.6■■■□□ 2.17
HLA-C-209ENST00000495835 ARRDC4Q8NCT1 418 aa28.6■■■□□ 2.17
HLA-C-209ENST00000495835 DCAF4Q8WV16 495 aa28.6■■■□□ 2.17
HLA-C-209ENST00000495835 DDX11Q96FC9 970 aa28.6■■■□□ 2.17
HLA-C-209ENST00000495835 DSCC1Q9BVC3 393 aa28.6■■■□□ 2.17
HLA-C-209ENST00000495835 DNAJC25-GNG10A0A024R161 153 aa28.59■■■□□ 2.17
HLA-C-209ENST00000495835 PGK2P07205 417 aa28.59■■■□□ 2.17
HLA-C-209ENST00000495835 TOP1P11387 765 aaKnown RBP28.59■■■□□ 2.17
HLA-C-209ENST00000495835 RRP12Q5JTH9 1297 aaKnown RBP28.59■■■□□ 2.17
HLA-C-209ENST00000495835 RAVER2Q9HCJ3 691 aaKnown RBP28.59■■■□□ 2.17
HLA-C-209ENST00000495835 PFASO15067 1338 aa28.59■■■□□ 2.17
HLA-C-209ENST00000495835 DNM1LO00429 736 aa28.58■■■□□ 2.17
HLA-C-209ENST00000495835 TKFCQ3LXA3 575 aa28.58■■■□□ 2.17
HLA-C-209ENST00000495835 ZNF467Q7Z7K2 595 aaPredicted RBP28.58■■■□□ 2.17
HLA-C-209ENST00000495835 PDE4AP27815 886 aa28.57■■■□□ 2.16
HLA-C-209ENST00000495835 HAND2P61296 217 aa28.57■■■□□ 2.16
HLA-C-209ENST00000495835 IKQ13123 557 aaPredicted RBP28.57■■■□□ 2.16
HLA-C-209ENST00000495835 CCDC178Q5BJE1 867 aa28.57■■■□□ 2.16
HLA-C-209ENST00000495835 TTC22Q5TAA0 569 aa28.57■■■□□ 2.16
HLA-C-209ENST00000495835 MAMDC4Q6UXC1 1216 aa28.57■■■□□ 2.16
HLA-C-209ENST00000495835 ESR2Q92731 530 aa28.57■■■□□ 2.16
HLA-C-209ENST00000495835 CTNNA3Q9UI47 895 aa28.57■■■□□ 2.16
HLA-C-209ENST00000495835 LAMA4Q16363 1823 aa28.56■■■□□ 2.16
HLA-C-209ENST00000495835 CHRDL2Q6WN34 429 aa28.56■■■□□ 2.16
HLA-C-209ENST00000495835 DNAH12Q6ZR08 3092 aa28.56■■■□□ 2.16
HLA-C-209ENST00000495835 SYNGAP1Q96PV0 1343 aa28.56■■■□□ 2.16
HLA-C-209ENST00000495835 ISY1Q9ULR0 285 aaKnown RBP28.56■■■□□ 2.16
HLA-C-209ENST00000495835 BTNL9Q6UXG8 535 aa28.55■■■□□ 2.16
HLA-C-209ENST00000495835 KCTD1Q719H9 257 aa28.55■■■□□ 2.16
HLA-C-209ENST00000495835 ANKRD35Q8N283 1001 aa28.55■■■□□ 2.16
HLA-C-209ENST00000495835 TMEM47Q9BQJ4 181 aa28.55■■■□□ 2.16
HLA-C-209ENST00000495835 PRO3102Q9H379 93 aa28.55■■■□□ 2.16
HLA-C-209ENST00000495835 IRX6P78412 446 aaPredicted RBP28.54■■■□□ 2.16
HLA-C-209ENST00000495835 PRAMEF19Q5SWL8 479 aa28.54■■■□□ 2.16
HLA-C-209ENST00000495835 TBC1D10CQ8IV04 446 aa28.54■■■□□ 2.16
HLA-C-209ENST00000495835 ACAD9Q9H845 621 aa28.54■■■□□ 2.16
HLA-C-209ENST00000495835 PRR12Q9ULL5 1215 aa28.54■■■□□ 2.16
HLA-C-209ENST00000495835 CNPY2Q9Y2B0 182 aa28.54■■■□□ 2.16
HLA-C-209ENST00000495835 RANBP2P49792 3224 aaKnown RBP28.53■■■□□ 2.16
HLA-C-209ENST00000495835 ZNF536O15090 1300 aa28.53■■■□□ 2.16
HLA-C-209ENST00000495835 RAD50Q92878 1312 aa28.53■■■□□ 2.16
HLA-C-209ENST00000495835 A0A1W2PPC1 479 aa28.53■■■□□ 2.16
HLA-C-209ENST00000495835 SLC4A3P48751 1232 aa28.53■■■□□ 2.16
HLA-C-209ENST00000495835 IMMTQ16891 758 aaKnown RBP28.53■■■□□ 2.16
HLA-C-209ENST00000495835 DGKHQ86XP1 1220 aa28.53■■■□□ 2.16
HLA-C-209ENST00000495835 SMCHD1A6NHR9 2005 aa28.53■■■□□ 2.16
HLA-C-209ENST00000495835 GSPT1P15170 499 aaKnown RBP28.52■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms