RNA–Protein interactions for RNA: ENST00000495532.1

HLA-DOA-206, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

Gene HLA-DOA, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-206ENST00000495532 MPHOSPH10O00566 681 aaKnown RBP13.75□□□□□ -0.21
HLA-DOA-206ENST00000495532 C6orf222P0C671 652 aaPredicted RBP13.75□□□□□ -0.21
HLA-DOA-206ENST00000495532 TNNI3KQ59H18 835 aa13.75□□□□□ -0.21
HLA-DOA-206ENST00000495532 CLEC10AQ8IUN9 316 aa13.75□□□□□ -0.21
HLA-DOA-206ENST00000495532 MSL3Q8N5Y2 521 aaKnown RBP13.75□□□□□ -0.21
HLA-DOA-206ENST00000495532 UPF3AQ9H1J1 476 aaKnown RBP13.75□□□□□ -0.21
HLA-DOA-206ENST00000495532 GPR108Q9NPR9 543 aa13.75□□□□□ -0.21
HLA-DOA-206ENST00000495532 ZNF214Q9UL59 606 aaPredicted RBP13.75□□□□□ -0.21
HLA-DOA-206ENST00000495532 COG5Q9UP83 839 aa13.75□□□□□ -0.21
HLA-DOA-206ENST00000495532 FPGT-TNNI3KV9GXZ4 949 aa13.75□□□□□ -0.21
HLA-DOA-206ENST00000495532 COL4A4P53420 1690 aaPredicted RBP13.75□□□□□ -0.21
HLA-DOA-206ENST00000495532 PNMA6EA0A0J9YXQ4 647 aa13.74□□□□□ -0.21
HLA-DOA-206ENST00000495532 E9PSI1 815 aa13.74□□□□□ -0.21
HLA-DOA-206ENST00000495532 PI4K2BG5E9Z4 385 aa13.74□□□□□ -0.21
HLA-DOA-206ENST00000495532 WDR46O15213 610 aaKnown RBP13.74□□□□□ -0.21
HLA-DOA-206ENST00000495532 CTAGE5O15320 804 aa13.74□□□□□ -0.21
HLA-DOA-206ENST00000495532 TLR3O15455 904 aaKnown RBP13.74□□□□□ -0.21
HLA-DOA-206ENST00000495532 IDH1O75874 414 aaKnown RBP13.74□□□□□ -0.21
HLA-DOA-206ENST00000495532 GNAI3P08754 354 aa13.74□□□□□ -0.21
HLA-DOA-206ENST00000495532 G3BP1Q13283 466 aaKnown RBP eCLIP13.74□□□□□ -0.21
HLA-DOA-206ENST00000495532 KRT40Q6A162 431 aa13.74□□□□□ -0.21
HLA-DOA-206ENST00000495532 SAMD1Q6SPF0 538 aaPredicted RBP13.74□□□□□ -0.21
HLA-DOA-206ENST00000495532 MAMDC4Q6UXC1 1216 aa13.74□□□□□ -0.21
HLA-DOA-206ENST00000495532 TMEM179Q6ZVK1 233 aa13.74□□□□□ -0.21
HLA-DOA-206ENST00000495532 MAGEB6Q8N7X4 407 aa13.74□□□□□ -0.21
HLA-DOA-206ENST00000495532 REPS2Q8NFH8 660 aa13.74□□□□□ -0.21
HLA-DOA-206ENST00000495532 VWCEQ96DN2 955 aa13.74□□□□□ -0.21
HLA-DOA-206ENST00000495532 RIOK1Q9BRS2 568 aaKnown RBP13.74□□□□□ -0.21
HLA-DOA-206ENST00000495532 API5Q9BZZ5 524 aaKnown RBP13.74□□□□□ -0.21
HLA-DOA-206ENST00000495532 VCPKMTQ9H867 229 aa13.74□□□□□ -0.21
HLA-DOA-206ENST00000495532 CD320Q9NPF0 282 aa13.74□□□□□ -0.21
HLA-DOA-206ENST00000495532 FBXO28Q9NVF7 368 aa13.74□□□□□ -0.21
HLA-DOA-206ENST00000495532 ZHX1Q9UKY1 873 aaPredicted RBP13.74□□□□□ -0.21
HLA-DOA-206ENST00000495532 TMX2Q9Y320 296 aa13.74□□□□□ -0.21
HLA-DOA-206ENST00000495532 EPOPA6NHQ4 379 aa13.73□□□□□ -0.21
HLA-DOA-206ENST00000495532 VWA5AO00534 786 aa13.73□□□□□ -0.21
HLA-DOA-206ENST00000495532 POLR3DP05423 398 aaPredicted RBP13.73□□□□□ -0.21
HLA-DOA-206ENST00000495532 STAT3P40763 770 aa13.73□□□□□ -0.21
HLA-DOA-206ENST00000495532 MRE11P49959 708 aa13.73□□□□□ -0.21
HLA-DOA-206ENST00000495532 GJA9P57773 515 aa13.73□□□□□ -0.21
HLA-DOA-206ENST00000495532 VTI1AQ96AJ9 217 aa13.73□□□□□ -0.21
HLA-DOA-206ENST00000495532 WNT8AQ9H1J5 351 aa13.73□□□□□ -0.21
HLA-DOA-206ENST00000495532 HIPK3Q9H422 1215 aa13.73□□□□□ -0.21
HLA-DOA-206ENST00000495532 SLC4A7Q9Y6M7 1214 aa13.73□□□□□ -0.21
HLA-DOA-206ENST00000495532 SCN5AQ14524 2016 aa13.73□□□□□ -0.21
HLA-DOA-206ENST00000495532 DNAJC25-GNG10A0A024R161 153 aa13.72□□□□□ -0.21
HLA-DOA-206ENST00000495532 SMIM22K7EJ46 135 aa13.72□□□□□ -0.21
HLA-DOA-206ENST00000495532 GTPBP6O43824 516 aaPredicted RBP13.72□□□□□ -0.21
HLA-DOA-206ENST00000495532 SLFN5Q08AF3 891 aa13.72□□□□□ -0.21
HLA-DOA-206ENST00000495532 SLC43A3Q8NBI5 491 aa13.72□□□□□ -0.21
HLA-DOA-206ENST00000495532 HLA-CQ95604 372 aa13.72□□□□□ -0.21
HLA-DOA-206ENST00000495532 BAZ2AQ9UIF9 1905 aaKnown RBP13.71□□□□□ -0.21
HLA-DOA-206ENST00000495532 PRR33A8MZF0 331 aa13.71□□□□□ -0.21
HLA-DOA-206ENST00000495532 CA3P07451 260 aa13.71□□□□□ -0.21
HLA-DOA-206ENST00000495532 ATP2A2P16615 1042 aaKnown RBP13.71□□□□□ -0.21
HLA-DOA-206ENST00000495532 COPB2P35606 906 aa13.71□□□□□ -0.21
HLA-DOA-206ENST00000495532 CCL23P55773 120 aa13.71□□□□□ -0.21
HLA-DOA-206ENST00000495532 NKX3-2P78367 333 aa13.71□□□□□ -0.21
HLA-DOA-206ENST00000495532 ICA1Q05084 483 aa13.71□□□□□ -0.21
HLA-DOA-206ENST00000495532 ACVR2BQ13705 512 aa13.71□□□□□ -0.21
HLA-DOA-206ENST00000495532 CCDC144BQ3MJ40 725 aa13.71□□□□□ -0.21
HLA-DOA-206ENST00000495532 GNASQ5JWF2 1037 aa13.71□□□□□ -0.21
HLA-DOA-206ENST00000495532 FAM9BQ8IZU0 186 aa13.71□□□□□ -0.21
HLA-DOA-206ENST00000495532 NOC4LQ9BVI4 516 aaKnown RBP13.71□□□□□ -0.21
HLA-DOA-206ENST00000495532 SH2D4AQ9H788 454 aa13.71□□□□□ -0.21
HLA-DOA-206ENST00000495532 CERS4Q9HA82 394 aa13.71□□□□□ -0.21
HLA-DOA-206ENST00000495532 ARHGEF10LQ9HCE6 1279 aa13.71□□□□□ -0.21
HLA-DOA-206ENST00000495532 TLR7Q9NYK1 1049 aaKnown RBP13.71□□□□□ -0.21
HLA-DOA-206ENST00000495532 DBNLQ9UJU6 430 aaKnown RBP13.71□□□□□ -0.21
HLA-DOA-206ENST00000495532 PPP1R9AQ9ULJ8 1098 aa13.71□□□□□ -0.21
HLA-DOA-206ENST00000495532 PTPRSQ13332 1948 aa13.7□□□□□ -0.22
HLA-DOA-206ENST00000495532 AKR1B1P15121 316 aa13.7□□□□□ -0.22
HLA-DOA-206ENST00000495532 TMEM67Q5HYA8 995 aa13.7□□□□□ -0.22
HLA-DOA-206ENST00000495532 ZNF467Q7Z7K2 595 aaPredicted RBP13.7□□□□□ -0.22
HLA-DOA-206ENST00000495532 FGD4Q96M96 766 aa13.7□□□□□ -0.22
HLA-DOA-206ENST00000495532 ANTXR1Q9H6X2 564 aa13.7□□□□□ -0.22
HLA-DOA-206ENST00000495532 SPC25Q9HBM1 224 aa13.7□□□□□ -0.22
HLA-DOA-206ENST00000495532 MCM9Q9NXL9 1143 aa13.7□□□□□ -0.22
HLA-DOA-206ENST00000495532 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.7□□□□□ -0.22
HLA-DOA-206ENST00000495532 GRIN2DO15399 1336 aa13.69□□□□□ -0.22
HLA-DOA-206ENST00000495532 ZNF318Q5VUA4 2279 aa13.69□□□□□ -0.22
HLA-DOA-206ENST00000495532 ZBBXA8MT70 800 aa13.69□□□□□ -0.22
HLA-DOA-206ENST00000495532 ARHGEF15O94989 841 aa13.69□□□□□ -0.22
HLA-DOA-206ENST00000495532 CYP2D6P10635 497 aa13.69□□□□□ -0.22
HLA-DOA-206ENST00000495532 BEX3Q00994 111 aa13.69□□□□□ -0.22
HLA-DOA-206ENST00000495532 TTLL4Q14679 1199 aa13.69□□□□□ -0.22
HLA-DOA-206ENST00000495532 CXCL17Q6UXB2 119 aa13.69□□□□□ -0.22
HLA-DOA-206ENST00000495532 RPUSD2Q8IZ73 545 aaKnown RBP13.69□□□□□ -0.22
HLA-DOA-206ENST00000495532 KATNBL1Q9H079 304 aa13.69□□□□□ -0.22
HLA-DOA-206ENST00000495532 ABHD16BQ9H3Z7 469 aa13.69□□□□□ -0.22
HLA-DOA-206ENST00000495532 RIPK3Q9Y572 518 aa13.69□□□□□ -0.22
HLA-DOA-206ENST00000495532 WDFY4Q6ZS81 3184 aa13.69□□□□□ -0.22
HLA-DOA-206ENST00000495532 GREB1LQ9C091 1923 aaPredicted RBP13.68□□□□□ -0.22
HLA-DOA-206ENST00000495532 ASTN1O14525 1302 aa13.68□□□□□ -0.22
HLA-DOA-206ENST00000495532 TANC1Q9C0D5 1861 aa13.68□□□□□ -0.22
HLA-DOA-206ENST00000495532 B4GALT4O60513 344 aa13.68□□□□□ -0.22
HLA-DOA-206ENST00000495532 GNAI2P04899 355 aa13.68□□□□□ -0.22
HLA-DOA-206ENST00000495532 NHLH1Q02575 133 aa13.68□□□□□ -0.22
HLA-DOA-206ENST00000495532 TMED8Q6PL24 325 aaPredicted RBP13.68□□□□□ -0.22
HLA-DOA-206ENST00000495532 DDX11Q96FC9 970 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms