RNA–Protein interactions for RNA: ENST00000495445.5

CTNS-207, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 2

Gene CTNS, Length 536 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-207ENST00000495445 COPB2P35606 906 aa20.43■□□□□ 0.86
CTNS-207ENST00000495445 NT5C2P49902 561 aa20.43■□□□□ 0.86
CTNS-207ENST00000495445 MNX1P50219 401 aaPredicted RBP20.43■□□□□ 0.86
CTNS-207ENST00000495445 MFSD14CQ5VZR4 134 aa20.43■□□□□ 0.86
CTNS-207ENST00000495445 RCSD1Q6JBY9 416 aa20.43■□□□□ 0.86
CTNS-207ENST00000495445 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.43■□□□□ 0.86
CTNS-207ENST00000495445 ANKLE1Q8NAG6 615 aa20.43■□□□□ 0.86
CTNS-207ENST00000495445 TMEM232C9JQI7 657 aa20.42■□□□□ 0.86
CTNS-207ENST00000495445 ZBED4O75132 1171 aa20.42■□□□□ 0.86
CTNS-207ENST00000495445 FDX1P10109 184 aa20.42■□□□□ 0.86
CTNS-207ENST00000495445 MCCP23508 829 aa20.42■□□□□ 0.86
CTNS-207ENST00000495445 CHMLP26374 656 aa20.42■□□□□ 0.86
CTNS-207ENST00000495445 CCND3P30281 292 aaPredicted RBP20.42■□□□□ 0.86
CTNS-207ENST00000495445 CHURC1Q8WUH1 139 aa20.42■□□□□ 0.86
CTNS-207ENST00000495445 KIFC2Q96AC6 838 aa20.42■□□□□ 0.86
CTNS-207ENST00000495445 TTC14Q96N46 770 aa20.42■□□□□ 0.86
CTNS-207ENST00000495445 TEX13BQ9BXU2 312 aa20.42■□□□□ 0.86
CTNS-207ENST00000495445 RNF41Q9H4P4 317 aaPredicted RBP20.42■□□□□ 0.86
CTNS-207ENST00000495445 RIPK3Q9Y572 518 aa20.42■□□□□ 0.86
CTNS-207ENST00000495445 FARP2O94887 1054 aaPredicted RBP20.41■□□□□ 0.86
CTNS-207ENST00000495445 SLC1A4P43007 532 aa20.41■□□□□ 0.86
CTNS-207ENST00000495445 OAZ1P54368 228 aa20.41■□□□□ 0.86
CTNS-207ENST00000495445 RRP12Q5JTH9 1297 aaKnown RBP20.41■□□□□ 0.86
CTNS-207ENST00000495445 FAM160B2Q86V87 743 aa20.41■□□□□ 0.86
CTNS-207ENST00000495445 TMEM47Q9BQJ4 181 aa20.41■□□□□ 0.86
CTNS-207ENST00000495445 TOMM22Q9NS69 142 aa20.41■□□□□ 0.86
CTNS-207ENST00000495445 SLC5A4Q9NY91 659 aa20.41■□□□□ 0.86
CTNS-207ENST00000495445 DIS3Q9Y2L1 958 aaKnown RBP20.41■□□□□ 0.86
CTNS-207ENST00000495445 DNAH12Q6ZR08 3092 aa20.4■□□□□ 0.86
CTNS-207ENST00000495445 TOP1P11387 765 aaKnown RBP20.4■□□□□ 0.86
CTNS-207ENST00000495445 CYP2C19P33261 490 aa20.4■□□□□ 0.86
CTNS-207ENST00000495445 STAT2P52630 851 aa20.4■□□□□ 0.86
CTNS-207ENST00000495445 ZNF792Q3KQV3 632 aa20.4■□□□□ 0.86
CTNS-207ENST00000495445 TRPV1Q8NER1 839 aa20.4■□□□□ 0.86
CTNS-207ENST00000495445 MAML3Q96JK9 1138 aa20.4■□□□□ 0.86
CTNS-207ENST00000495445 MMP19Q99542 508 aa20.4■□□□□ 0.86
CTNS-207ENST00000495445 CTNNA3Q9UI47 895 aa20.4■□□□□ 0.86
CTNS-207ENST00000495445 NEDD4P46934 1319 aa20.39■□□□□ 0.85
CTNS-207ENST00000495445 RAD50Q92878 1312 aa20.39■□□□□ 0.85
CTNS-207ENST00000495445 CYBAP13498 195 aa20.39■□□□□ 0.85
CTNS-207ENST00000495445 SNRNP48Q6IEG0 339 aaKnown RBP20.39■□□□□ 0.85
CTNS-207ENST00000495445 BTNL9Q6UXG8 535 aa20.39■□□□□ 0.85
CTNS-207ENST00000495445 KCTD1Q719H9 257 aa20.39■□□□□ 0.85
CTNS-207ENST00000495445 DCAF4Q8WV16 495 aa20.39■□□□□ 0.85
CTNS-207ENST00000495445 ESR2Q92731 530 aa20.39■□□□□ 0.85
CTNS-207ENST00000495445 PAWRQ96IZ0 340 aaKnown RBP20.39■□□□□ 0.85
CTNS-207ENST00000495445 RAVER2Q9HCJ3 691 aaKnown RBP20.39■□□□□ 0.85
CTNS-207ENST00000495445 ZNF536O15090 1300 aa20.38■□□□□ 0.85
CTNS-207ENST00000495445 DNAJC25-GNG10A0A024R161 153 aa20.38■□□□□ 0.85
CTNS-207ENST00000495445 KCTD2Q14681 263 aa20.38■□□□□ 0.85
CTNS-207ENST00000495445 IMMTQ16891 758 aaKnown RBP20.38■□□□□ 0.85
CTNS-207ENST00000495445 ANKS1AQ92625 1134 aa20.38■□□□□ 0.85
CTNS-207ENST00000495445 PGK2P07205 417 aa20.37■□□□□ 0.85
CTNS-207ENST00000495445 RASGRP2Q7LDG7 609 aa20.37■□□□□ 0.85
CTNS-207ENST00000495445 NECAB2Q7Z6G3 386 aa20.37■□□□□ 0.85
CTNS-207ENST00000495445 DGKHQ86XP1 1220 aa20.37■□□□□ 0.85
CTNS-207ENST00000495445 CPXCR1Q8N123 301 aa20.37■□□□□ 0.85
CTNS-207ENST00000495445 CHST13Q8NET6 341 aa20.37■□□□□ 0.85
CTNS-207ENST00000495445 DIS3LQ8TF46 1054 aaKnown RBP20.37■□□□□ 0.85
CTNS-207ENST00000495445 RUFY2Q8WXA3 655 aa20.37■□□□□ 0.85
CTNS-207ENST00000495445 HTATIP2Q9BUP3 242 aa20.37■□□□□ 0.85
CTNS-207ENST00000495445 SGSM2O43147 1006 aa20.36■□□□□ 0.85
CTNS-207ENST00000495445 SNHG28P0DPA3 235 aa20.36■□□□□ 0.85
CTNS-207ENST00000495445 CENPQQ7L2Z9 268 aaPredicted RBP20.36■□□□□ 0.85
CTNS-207ENST00000495445 ZSWIM5Q9P217 1185 aa20.36■□□□□ 0.85
CTNS-207ENST00000495445 DDX20Q9UHI6 824 aaKnown RBP20.36■□□□□ 0.85
CTNS-207ENST00000495445 NRBP1Q9UHY1 535 aa20.36■□□□□ 0.85
CTNS-207ENST00000495445 PRR12Q9ULL5 1215 aa20.36■□□□□ 0.85
CTNS-207ENST00000495445 LAMA4Q16363 1823 aa20.36■□□□□ 0.85
CTNS-207ENST00000495445 MSCO60682 206 aa20.35■□□□□ 0.85
CTNS-207ENST00000495445 PTH1RQ03431 593 aa20.35■□□□□ 0.85
CTNS-207ENST00000495445 CCDC178Q5BJE1 867 aa20.35■□□□□ 0.85
CTNS-207ENST00000495445 TINF2Q9BSI4 451 aa20.35■□□□□ 0.85
CTNS-207ENST00000495445 FBXO40Q9UH90 709 aa20.35■□□□□ 0.85
CTNS-207ENST00000495445 CTDP1Q9Y5B0 961 aaPredicted RBP20.35■□□□□ 0.85
CTNS-207ENST00000495445 KDM4AO75164 1064 aa20.34■□□□□ 0.85
CTNS-207ENST00000495445 PDHBP11177 359 aa20.34■□□□□ 0.85
CTNS-207ENST00000495445 COL6A1P12109 1028 aa20.34■□□□□ 0.85
CTNS-207ENST00000495445 PRAMEF19Q5SWL8 479 aa20.34■□□□□ 0.85
CTNS-207ENST00000495445 TTBK2Q6IQ55 1244 aa20.34■□□□□ 0.85
CTNS-207ENST00000495445 MAMDC4Q6UXC1 1216 aa20.34■□□□□ 0.85
CTNS-207ENST00000495445 MSL3Q8N5Y2 521 aaKnown RBP20.34■□□□□ 0.85
CTNS-207ENST00000495445 DPF3Q92784 378 aa20.34■□□□□ 0.85
CTNS-207ENST00000495445 CHMP4CQ96CF2 233 aa20.34■□□□□ 0.85
CTNS-207ENST00000495445 AGBL1Q96MI9 1066 aa20.34■□□□□ 0.85
CTNS-207ENST00000495445 B4E1Z4 1266 aa20.33■□□□□ 0.85
CTNS-207ENST00000495445 SEPT4O43236 478 aa20.33■□□□□ 0.85
CTNS-207ENST00000495445 TKFCQ3LXA3 575 aa20.33■□□□□ 0.85
CTNS-207ENST00000495445 ZNF467Q7Z7K2 595 aaPredicted RBP20.33■□□□□ 0.85
CTNS-207ENST00000495445 IQCA1Q86XH1 822 aa20.33■□□□□ 0.85
CTNS-207ENST00000495445 MAP4K1Q92918 833 aa20.33■□□□□ 0.85
CTNS-207ENST00000495445 ZSCAN10Q96SZ4 725 aaPredicted RBP20.33■□□□□ 0.85
CTNS-207ENST00000495445 ZKSCAN3Q9BRR0 538 aa20.33■□□□□ 0.85
CTNS-207ENST00000495445 KRT23Q9C075 422 aa20.33■□□□□ 0.85
CTNS-207ENST00000495445 RANBP17Q9H2T7 1088 aaKnown RBP20.33■□□□□ 0.85
CTNS-207ENST00000495445 CNNM2Q9H8M5 875 aa20.33■□□□□ 0.85
CTNS-207ENST00000495445 H0YGN5 161 aa20.32■□□□□ 0.84
CTNS-207ENST00000495445 CNGA1P29973 690 aa20.32■□□□□ 0.84
CTNS-207ENST00000495445 ZNF543Q08ER8 600 aa20.32■□□□□ 0.84
CTNS-207ENST00000495445 IKQ13123 557 aaPredicted RBP20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms