RNA–Protein interactions for RNA: ENST00000494920.1

KDM1A-205, Transcript of lysine demethylase 1A, humanhuman

TSL 3

Gene KDM1A, Length 905 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1A-205ENST00000494920 GTF3C2Q8WUA4 911 aaPredicted RBP12.89□□□□□ -0.35
KDM1A-205ENST00000494920 MTMR8Q96EF0 704 aa12.89□□□□□ -0.35
KDM1A-205ENST00000494920 SLC38A10Q9HBR0 1119 aa12.89□□□□□ -0.35
KDM1A-205ENST00000494920 BTBD7Q9P203 1132 aa12.89□□□□□ -0.35
KDM1A-205ENST00000494920 ZNF214Q9UL59 606 aaPredicted RBP12.89□□□□□ -0.35
KDM1A-205ENST00000494920 RABGAP1Q9Y3P9 1069 aa12.89□□□□□ -0.35
KDM1A-205ENST00000494920 ZNF536O15090 1300 aa12.88□□□□□ -0.35
KDM1A-205ENST00000494920 FRMPD2Q68DX3 1309 aaPredicted RBP12.88□□□□□ -0.35
KDM1A-205ENST00000494920 ZNF236Q9UL36 1845 aa12.88□□□□□ -0.35
KDM1A-205ENST00000494920 KLF18A0A0U1RQI7 1052 aa12.88□□□□□ -0.35
KDM1A-205ENST00000494920 GPR25O00155 361 aa12.88□□□□□ -0.35
KDM1A-205ENST00000494920 VWA5AO00534 786 aa12.88□□□□□ -0.35
KDM1A-205ENST00000494920 RAD21O60216 631 aa12.88□□□□□ -0.35
KDM1A-205ENST00000494920 PARP1P09874 1014 aaKnown RBP12.88□□□□□ -0.35
KDM1A-205ENST00000494920 GOLGA8HP0CJ92 632 aa12.88□□□□□ -0.35
KDM1A-205ENST00000494920 FUT2Q10981 343 aa12.88□□□□□ -0.35
KDM1A-205ENST00000494920 CCDC96Q2M329 555 aa12.88□□□□□ -0.35
KDM1A-205ENST00000494920 SYDE2Q5VT97 1194 aa12.88□□□□□ -0.35
KDM1A-205ENST00000494920 CATIPQ7Z7H3 387 aa12.88□□□□□ -0.35
KDM1A-205ENST00000494920 NBPF11Q86T75 865 aa12.88□□□□□ -0.35
KDM1A-205ENST00000494920 MB21D1Q8N884 522 aa12.88□□□□□ -0.35
KDM1A-205ENST00000494920 CHURC1Q8WUH1 139 aa12.88□□□□□ -0.35
KDM1A-205ENST00000494920 CHMP4CQ96CF2 233 aa12.88□□□□□ -0.35
KDM1A-205ENST00000494920 RANBP17Q9H2T7 1088 aaKnown RBP12.88□□□□□ -0.35
KDM1A-205ENST00000494920 CPVLQ9H3G5 476 aa12.88□□□□□ -0.35
KDM1A-205ENST00000494920 PDRG1Q9NUG6 133 aa12.88□□□□□ -0.35
KDM1A-205ENST00000494920 HOXC10Q9NYD6 342 aa12.88□□□□□ -0.35
KDM1A-205ENST00000494920 CPA4Q9UI42 421 aa12.88□□□□□ -0.35
KDM1A-205ENST00000494920 TSKSQ9UJT2 592 aa12.88□□□□□ -0.35
KDM1A-205ENST00000494920 PRR12Q9ULL5 1215 aa12.88□□□□□ -0.35
KDM1A-205ENST00000494920 MTMR7Q9Y216 660 aa12.88□□□□□ -0.35
KDM1A-205ENST00000494920 SLC12A7Q9Y666 1083 aa12.88□□□□□ -0.35
KDM1A-205ENST00000494920 CCDC69A6NI79 296 aa12.87□□□□□ -0.35
KDM1A-205ENST00000494920 ATP2A1O14983 1001 aa12.87□□□□□ -0.35
KDM1A-205ENST00000494920 CYTH3O43739 400 aa12.87□□□□□ -0.35
KDM1A-205ENST00000494920 RXRAP19793 462 aa12.87□□□□□ -0.35
KDM1A-205ENST00000494920 CTGFP29279 349 aa12.87□□□□□ -0.35
KDM1A-205ENST00000494920 SLC16A2P36021 539 aa12.87□□□□□ -0.35
KDM1A-205ENST00000494920 AK2P54819 239 aa12.87□□□□□ -0.35
KDM1A-205ENST00000494920 ERVK-9P63128 1117 aa12.87□□□□□ -0.35
KDM1A-205ENST00000494920 ERVK-24P63145 666 aa12.87□□□□□ -0.35
KDM1A-205ENST00000494920 TMEM132BQ14DG7 1078 aa12.87□□□□□ -0.35
KDM1A-205ENST00000494920 RABEP1Q15276 862 aa12.87□□□□□ -0.35
KDM1A-205ENST00000494920 Q3C1V9 767 aa12.87□□□□□ -0.35
KDM1A-205ENST00000494920 TMTC3Q6ZXV5 915 aa12.87□□□□□ -0.35
KDM1A-205ENST00000494920 MICU3Q86XE3 530 aa12.87□□□□□ -0.35
KDM1A-205ENST00000494920 RAB11FIP4Q86YS3 637 aa12.87□□□□□ -0.35
KDM1A-205ENST00000494920 ANKRD13CQ8N6S4 541 aa12.87□□□□□ -0.35
KDM1A-205ENST00000494920 SMCR8Q8TEV9 937 aaPredicted RBP12.87□□□□□ -0.35
KDM1A-205ENST00000494920 RIOX1Q9H6W3 641 aa12.87□□□□□ -0.35
KDM1A-205ENST00000494920 UPF2Q9HAU5 1272 aaKnown RBP12.87□□□□□ -0.35
KDM1A-205ENST00000494920 GPCPD1Q9NPB8 672 aa12.87□□□□□ -0.35
KDM1A-205ENST00000494920 LCTP09848 1927 aa12.87□□□□□ -0.35
KDM1A-205ENST00000494920 ZNFX1Q9P2E3 1918 aaKnown RBP12.87□□□□□ -0.35
KDM1A-205ENST00000494920 ZBTB43O43298 467 aa12.86□□□□□ -0.35
KDM1A-205ENST00000494920 PLEKHA8P1O95397 391 aa12.86□□□□□ -0.35
KDM1A-205ENST00000494920 CALM1P0DP23 149 aa12.86□□□□□ -0.35
KDM1A-205ENST00000494920 CALM2P0DP24 149 aa12.86□□□□□ -0.35
KDM1A-205ENST00000494920 CALM3P0DP25 149 aa12.86□□□□□ -0.35
KDM1A-205ENST00000494920 FDX1P10109 184 aa12.86□□□□□ -0.35
KDM1A-205ENST00000494920 SMARCA1P28370 1054 aa12.86□□□□□ -0.35
KDM1A-205ENST00000494920 PDIA3P30101 505 aaKnown RBP12.86□□□□□ -0.35
KDM1A-205ENST00000494920 CDC27P30260 824 aa12.86□□□□□ -0.35
KDM1A-205ENST00000494920 NEK4P51957 841 aa12.86□□□□□ -0.35
KDM1A-205ENST00000494920 NFXL1Q6ZNB6 911 aa12.86□□□□□ -0.35
KDM1A-205ENST00000494920 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.86□□□□□ -0.35
KDM1A-205ENST00000494920 FANCBQ8NB91 859 aa12.86□□□□□ -0.35
KDM1A-205ENST00000494920 NUP133Q8WUM0 1156 aa12.86□□□□□ -0.35
KDM1A-205ENST00000494920 KIFC2Q96AC6 838 aa12.86□□□□□ -0.35
KDM1A-205ENST00000494920 ZNF274Q96GC6 653 aaPredicted RBP12.86□□□□□ -0.35
KDM1A-205ENST00000494920 BEGAINQ9BUH8 593 aa12.86□□□□□ -0.35
KDM1A-205ENST00000494920 SPZ1Q9BXG8 430 aa12.86□□□□□ -0.35
KDM1A-205ENST00000494920 TPCN1Q9ULQ1 816 aa12.86□□□□□ -0.35
KDM1A-205ENST00000494920 CNTNAP5Q8WYK1 1306 aa12.86□□□□□ -0.35
KDM1A-205ENST00000494920 RBBP6Q7Z6E9 1792 aaKnown RBP12.85□□□□□ -0.35
KDM1A-205ENST00000494920 GOLGA8BA8MQT2 603 aa12.85□□□□□ -0.35
KDM1A-205ENST00000494920 KLRF2D3W0D1 207 aa12.85□□□□□ -0.35
KDM1A-205ENST00000494920 CD2BP2O95400 341 aaKnown RBP12.85□□□□□ -0.35
KDM1A-205ENST00000494920 LARGE1O95461 756 aa12.85□□□□□ -0.35
KDM1A-205ENST00000494920 OAZ1P54368 228 aa12.85□□□□□ -0.35
KDM1A-205ENST00000494920 ST3GAL1Q11201 340 aa12.85□□□□□ -0.35
KDM1A-205ENST00000494920 NTRK3Q16288 839 aa12.85□□□□□ -0.35
KDM1A-205ENST00000494920 ADGRF4Q8IZF3 695 aa12.85□□□□□ -0.35
KDM1A-205ENST00000494920 SRBD1Q8N5C6 995 aaKnown RBP12.85□□□□□ -0.35
KDM1A-205ENST00000494920 ZNF296Q8WUU4 475 aaPredicted RBP12.85□□□□□ -0.35
KDM1A-205ENST00000494920 MOV10L1Q9BXT6 1211 aaKnown RBP12.85□□□□□ -0.35
KDM1A-205ENST00000494920 UBA5Q9GZZ9 404 aa12.85□□□□□ -0.35
KDM1A-205ENST00000494920 SPATC1LQ9H0A9 340 aa12.85□□□□□ -0.35
KDM1A-205ENST00000494920 PORCNQ9H237 461 aa12.85□□□□□ -0.35
KDM1A-205ENST00000494920 JMJD4Q9H9V9 463 aa12.85□□□□□ -0.35
KDM1A-205ENST00000494920 GOLGA8AA7E2F4 631 aa12.84□□□□□ -0.35
KDM1A-205ENST00000494920 KIF5BP33176 963 aa12.84□□□□□ -0.35
KDM1A-205ENST00000494920 CTCFP49711 727 aaPredicted RBP12.84□□□□□ -0.35
KDM1A-205ENST00000494920 LACTBP83111 547 aaPredicted RBP12.84□□□□□ -0.35
KDM1A-205ENST00000494920 SP3Q02447 781 aa12.84□□□□□ -0.35
KDM1A-205ENST00000494920 RTN1Q16799 776 aa12.84□□□□□ -0.35
KDM1A-205ENST00000494920 RIOX2Q8IUF8 465 aa12.84□□□□□ -0.35
KDM1A-205ENST00000494920 CCDC144CPQ8IYA2 1237 aa12.84□□□□□ -0.35
KDM1A-205ENST00000494920 SHCBP1Q8NEM2 672 aa12.84□□□□□ -0.35
KDM1A-205ENST00000494920 IL27Q8NEV9 243 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 330.3 ms