RNA–Protein interactions for RNA: ENST00000494862.1

HDLBP-245, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 356 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-245ENST00000494862 RRP1BQ14684 758 aaKnown RBP13.18□□□□□ -0.3
HDLBP-245ENST00000494862 MAP3K11Q16584 847 aa13.18□□□□□ -0.3
HDLBP-245ENST00000494862 SLFN13Q68D06 897 aa13.18□□□□□ -0.3
HDLBP-245ENST00000494862 ARHGAP27Q6ZUM4 889 aa13.18□□□□□ -0.3
HDLBP-245ENST00000494862 HEATR3Q7Z4Q2 680 aa13.18□□□□□ -0.3
HDLBP-245ENST00000494862 SIAH1Q8IUQ4 282 aa13.18□□□□□ -0.3
HDLBP-245ENST00000494862 MICALL2Q8IY33 904 aa13.18□□□□□ -0.3
HDLBP-245ENST00000494862 ENGASEQ8NFI3 743 aa13.18□□□□□ -0.3
HDLBP-245ENST00000494862 GPKOWQ92917 476 aaPredicted RBP eCLIP13.18□□□□□ -0.3
HDLBP-245ENST00000494862 UBA5Q9GZZ9 404 aa13.18□□□□□ -0.3
HDLBP-245ENST00000494862 GPCPD1Q9NPB8 672 aa13.18□□□□□ -0.3
HDLBP-245ENST00000494862 CNOT7Q9UIV1 285 aaKnown RBP13.18□□□□□ -0.3
HDLBP-245ENST00000494862 GJA3Q9Y6H8 435 aa13.18□□□□□ -0.3
HDLBP-245ENST00000494862 MYH8P13535 1937 aa13.17□□□□□ -0.3
HDLBP-245ENST00000494862 LMNB1P20700 586 aa13.17□□□□□ -0.3
HDLBP-245ENST00000494862 MARCKSP29966 332 aaPredicted RBP13.17□□□□□ -0.3
HDLBP-245ENST00000494862 TNFAIP1Q13829 316 aa13.17□□□□□ -0.3
HDLBP-245ENST00000494862 CCDC96Q2M329 555 aa13.17□□□□□ -0.3
HDLBP-245ENST00000494862 SHROOM1Q2M3G4 852 aaPredicted RBP13.17□□□□□ -0.3
HDLBP-245ENST00000494862 EARS2Q5JPH6 523 aaKnown RBP13.17□□□□□ -0.3
HDLBP-245ENST00000494862 TYW1BQ6NUM6 668 aa13.17□□□□□ -0.3
HDLBP-245ENST00000494862 RBM43Q6ZSC3 357 aaKnown RBP13.17□□□□□ -0.3
HDLBP-245ENST00000494862 GMCL1P1Q8NEA9 526 aa13.17□□□□□ -0.3
HDLBP-245ENST00000494862 PIGSQ96S52 555 aa13.17□□□□□ -0.3
HDLBP-245ENST00000494862 FHDC1Q9C0D6 1143 aaPredicted RBP13.17□□□□□ -0.3
HDLBP-245ENST00000494862 TMEM39BQ9GZU3 492 aa13.17□□□□□ -0.3
HDLBP-245ENST00000494862 ZMYND12Q9H0C1 365 aa13.17□□□□□ -0.3
HDLBP-245ENST00000494862 RBSNQ9H1K0 784 aa13.17□□□□□ -0.3
HDLBP-245ENST00000494862 TNMDQ9H2S6 317 aa13.17□□□□□ -0.3
HDLBP-245ENST00000494862 CPVLQ9H3G5 476 aa13.17□□□□□ -0.3
HDLBP-245ENST00000494862 VAT1LQ9HCJ6 419 aa13.17□□□□□ -0.3
HDLBP-245ENST00000494862 PCDHB6Q9Y5E3 794 aa13.17□□□□□ -0.3
HDLBP-245ENST00000494862 ZNF541Q9H0D2 1346 aa13.16□□□□□ -0.3
HDLBP-245ENST00000494862 FAM237AA0A1B0GTK4 181 aa13.16□□□□□ -0.3
HDLBP-245ENST00000494862 ESYT2A0FGR8 921 aa13.16□□□□□ -0.3
HDLBP-245ENST00000494862 FAM205CA6NFA0 338 aa13.16□□□□□ -0.3
HDLBP-245ENST00000494862 M0R2N6 131 aa13.16□□□□□ -0.3
HDLBP-245ENST00000494862 KINO60870 393 aaKnown RBP13.16□□□□□ -0.3
HDLBP-245ENST00000494862 PTPREP23469 700 aa13.16□□□□□ -0.3
HDLBP-245ENST00000494862 NAPAP54920 295 aa13.16□□□□□ -0.3
HDLBP-245ENST00000494862 JAG1P78504 1218 aa13.16□□□□□ -0.3
HDLBP-245ENST00000494862 SNW1Q13573 536 aaKnown RBP13.16□□□□□ -0.3
HDLBP-245ENST00000494862 RASA3Q14644 834 aa13.16□□□□□ -0.3
HDLBP-245ENST00000494862 TTC38Q5R3I4 469 aa13.16□□□□□ -0.3
HDLBP-245ENST00000494862 HOMER1Q86YM7 354 aa13.16□□□□□ -0.3
HDLBP-245ENST00000494862 FMR1NBQ8N0W7 255 aaPredicted RBP13.16□□□□□ -0.3
HDLBP-245ENST00000494862 KRI1Q8N9T8 703 aaKnown RBP13.16□□□□□ -0.3
HDLBP-245ENST00000494862 MTMR8Q96EF0 704 aa13.16□□□□□ -0.3
HDLBP-245ENST00000494862 GMCL1Q96IK5 515 aa13.16□□□□□ -0.3
HDLBP-245ENST00000494862 FUCA2Q9BTY2 467 aa13.16□□□□□ -0.3
HDLBP-245ENST00000494862 JMJD4Q9H9V9 463 aa13.16□□□□□ -0.3
HDLBP-245ENST00000494862 PNMA6FA0A0J9YX94 578 aa13.15□□□□□ -0.3
HDLBP-245ENST00000494862 A0A1B0GVL5 298 aa13.15□□□□□ -0.3
HDLBP-245ENST00000494862 F5H6K3 240 aa13.15□□□□□ -0.3
HDLBP-245ENST00000494862 H7C1D1 291 aa13.15□□□□□ -0.3
HDLBP-245ENST00000494862 ATP2B1P20020 1258 aa13.15□□□□□ -0.3
HDLBP-245ENST00000494862 GNA11P29992 359 aa13.15□□□□□ -0.3
HDLBP-245ENST00000494862 SLC1A4P43007 532 aa13.15□□□□□ -0.3
HDLBP-245ENST00000494862 KLRC3Q07444 240 aa13.15□□□□□ -0.3
HDLBP-245ENST00000494862 CAMK4Q16566 473 aa13.15□□□□□ -0.3
HDLBP-245ENST00000494862 RESP18Q5W5W9 173 aa13.15□□□□□ -0.3
HDLBP-245ENST00000494862 TTBK2Q6IQ55 1244 aa13.15□□□□□ -0.3
HDLBP-245ENST00000494862 PPP1R18Q6NYC8 613 aa13.15□□□□□ -0.3
HDLBP-245ENST00000494862 PIK3AP1Q6ZUJ8 805 aa13.15□□□□□ -0.3
HDLBP-245ENST00000494862 KCTD1Q719H9 257 aa13.15□□□□□ -0.3
HDLBP-245ENST00000494862 ADGRF4Q8IZF3 695 aa13.15□□□□□ -0.3
HDLBP-245ENST00000494862 ZNF579Q8NAF0 562 aaKnown RBP13.15□□□□□ -0.3
HDLBP-245ENST00000494862 ARHGEF10LQ9HCE6 1279 aa13.15□□□□□ -0.3
HDLBP-245ENST00000494862 C6orf50Q9HD87 102 aa13.15□□□□□ -0.3
HDLBP-245ENST00000494862 FBXO2Q9UK22 296 aaPredicted RBP13.15□□□□□ -0.3
HDLBP-245ENST00000494862 ZBTB21Q9ULJ3 1066 aa13.15□□□□□ -0.3
HDLBP-245ENST00000494862 PCDHA6Q9UN73 950 aa13.15□□□□□ -0.3
HDLBP-245ENST00000494862 FARP1Q9Y4F1 1045 aaPredicted RBP13.15□□□□□ -0.3
HDLBP-245ENST00000494862 PCDHA8Q9Y5H6 950 aa13.15□□□□□ -0.3
HDLBP-245ENST00000494862 SRPRBQ9Y5M8 271 aaKnown RBP13.15□□□□□ -0.3
HDLBP-245ENST00000494862 CCDC194A0A1B0GVG4 234 aa13.14□□□□□ -0.31
HDLBP-245ENST00000494862 SMCO2A6NFE2 343 aa13.14□□□□□ -0.31
HDLBP-245ENST00000494862 NDUFB10O96000 172 aa13.14□□□□□ -0.31
HDLBP-245ENST00000494862 EGFRP00533 1210 aa13.14□□□□□ -0.31
HDLBP-245ENST00000494862 CCDC192P0DO97 292 aa13.14□□□□□ -0.31
HDLBP-245ENST00000494862 CAP2P40123 477 aa13.14□□□□□ -0.31
HDLBP-245ENST00000494862 NDUFA8P51970 172 aa13.14□□□□□ -0.31
HDLBP-245ENST00000494862 KIF4BQ2VIQ3 1234 aa13.14□□□□□ -0.31
HDLBP-245ENST00000494862 TBC1D10BQ4KMP7 808 aaPredicted RBP13.14□□□□□ -0.31
HDLBP-245ENST00000494862 NOM1Q5C9Z4 860 aaKnown RBP13.14□□□□□ -0.31
HDLBP-245ENST00000494862 SAMD7Q7Z3H4 446 aa13.14□□□□□ -0.31
HDLBP-245ENST00000494862 KRT25Q7Z3Z0 450 aa13.14□□□□□ -0.31
HDLBP-245ENST00000494862 CDAN1Q8IWY9 1227 aa13.14□□□□□ -0.31
HDLBP-245ENST00000494862 GINM1Q9NU53 330 aa13.14□□□□□ -0.31
HDLBP-245ENST00000494862 HPSEQ9Y251 543 aa13.14□□□□□ -0.31
HDLBP-245ENST00000494862 ADAMTS3O15072 1205 aa13.13□□□□□ -0.31
HDLBP-245ENST00000494862 BMP3P12645 472 aa13.13□□□□□ -0.31
HDLBP-245ENST00000494862 PFKFB1P16118 471 aa13.13□□□□□ -0.31
HDLBP-245ENST00000494862 ZNF174Q15697 407 aa13.13□□□□□ -0.31
HDLBP-245ENST00000494862 SHC4Q6S5L8 630 aa13.13□□□□□ -0.31
HDLBP-245ENST00000494862 MIGA2Q7L4E1 593 aa13.13□□□□□ -0.31
HDLBP-245ENST00000494862 GPC2Q8N158 579 aa13.13□□□□□ -0.31
HDLBP-245ENST00000494862 FERMT2Q96AC1 680 aa13.13□□□□□ -0.31
HDLBP-245ENST00000494862 TIGD1Q96MW7 591 aa13.13□□□□□ -0.31
HDLBP-245ENST00000494862 TEPSINQ96N21 525 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms