RNA–Protein interactions for RNA: ENST00000494780.1

COL27A1-208, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 4

Gene COL27A1, Length 514 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-208ENST00000494780 ZNF865P0CJ78 1059 aaPredicted RBP27.69■■■□□ 2.02
COL27A1-208ENST00000494780 AKR1A1P14550 325 aa27.69■■■□□ 2.02
COL27A1-208ENST00000494780 TAL1P17542 331 aaPredicted RBP27.69■■■□□ 2.02
COL27A1-208ENST00000494780 RNF180Q86T96 592 aa27.69■■■□□ 2.02
COL27A1-208ENST00000494780 FERMT2Q96AC1 680 aa27.69■■■□□ 2.02
COL27A1-208ENST00000494780 MTMR10Q9NXD2 777 aa27.69■■■□□ 2.02
COL27A1-208ENST00000494780 CTDP1Q9Y5B0 961 aaPredicted RBP27.69■■■□□ 2.02
COL27A1-208ENST00000494780 LTBP2Q14767 1821 aa27.69■■■□□ 2.02
COL27A1-208ENST00000494780 PDE4BQ07343 736 aa27.68■■■□□ 2.02
COL27A1-208ENST00000494780 GMCL1P1Q8NEA9 526 aa27.68■■■□□ 2.02
COL27A1-208ENST00000494780 DDX11Q96FC9 970 aa27.68■■■□□ 2.02
COL27A1-208ENST00000494780 FSD1Q9BTV5 496 aa27.68■■■□□ 2.02
COL27A1-208ENST00000494780 PRDM5Q9NQX1 630 aaPredicted RBP27.68■■■□□ 2.02
COL27A1-208ENST00000494780 FEM1BQ9UK73 627 aa27.68■■■□□ 2.02
COL27A1-208ENST00000494780 RIPK3Q9Y572 518 aa27.68■■■□□ 2.02
COL27A1-208ENST00000494780 PLIN4Q96Q06 1357 aa27.68■■■□□ 2.02
COL27A1-208ENST00000494780 SMCHD1A6NHR9 2005 aa27.68■■■□□ 2.02
COL27A1-208ENST00000494780 SYNGAP1Q96PV0 1343 aa27.67■■■□□ 2.02
COL27A1-208ENST00000494780 MYH4Q9Y623 1939 aa27.67■■■□□ 2.02
COL27A1-208ENST00000494780 SLC3A2P08195 630 aaKnown RBP27.67■■■□□ 2.02
COL27A1-208ENST00000494780 ZMYM1Q5SVZ6 1142 aa27.67■■■□□ 2.02
COL27A1-208ENST00000494780 CPXCR1Q8N123 301 aa27.67■■■□□ 2.02
COL27A1-208ENST00000494780 NEDD1Q8NHV4 660 aa27.67■■■□□ 2.02
COL27A1-208ENST00000494780 KIFC2Q96AC6 838 aa27.67■■■□□ 2.02
COL27A1-208ENST00000494780 SEC62Q99442 399 aaKnown RBP27.67■■■□□ 2.02
COL27A1-208ENST00000494780 STXBP5LQ9Y2K9 1186 aa27.67■■■□□ 2.02
COL27A1-208ENST00000494780 DNAJC25-GNG10A0A024R161 153 aa27.66■■■□□ 2.02
COL27A1-208ENST00000494780 PGK1P00558 417 aa27.66■■■□□ 2.02
COL27A1-208ENST00000494780 TSPY3P0CV98 308 aa27.66■■■□□ 2.02
COL27A1-208ENST00000494780 TSPY8P0CW00 308 aa27.66■■■□□ 2.02
COL27A1-208ENST00000494780 MAMDC4Q6UXC1 1216 aa27.66■■■□□ 2.02
COL27A1-208ENST00000494780 DHX30Q7L2E3 1194 aaKnown RBP eCLIP27.66■■■□□ 2.02
COL27A1-208ENST00000494780 OTUD7AQ8TE49 926 aaPredicted RBP27.66■■■□□ 2.02
COL27A1-208ENST00000494780 NAPBQ9H115 298 aa27.66■■■□□ 2.02
COL27A1-208ENST00000494780 SLC38A10Q9HBR0 1119 aa27.66■■■□□ 2.02
COL27A1-208ENST00000494780 PDLIM7Q9NR12 457 aa27.66■■■□□ 2.02
COL27A1-208ENST00000494780 OAZ1P54368 228 aa27.65■■■□□ 2.02
COL27A1-208ENST00000494780 FAM109BQ6ICB4 259 aaPredicted RBP27.65■■■□□ 2.02
COL27A1-208ENST00000494780 LRRC47Q8N1G4 583 aaKnown RBP27.65■■■□□ 2.02
COL27A1-208ENST00000494780 FBXO40Q9UH90 709 aa27.65■■■□□ 2.02
COL27A1-208ENST00000494780 MX1P20591 662 aa27.64■■■□□ 2.02
COL27A1-208ENST00000494780 SLC4A3P48751 1232 aa27.64■■■□□ 2.02
COL27A1-208ENST00000494780 PPARAQ07869 468 aa27.64■■■□□ 2.02
COL27A1-208ENST00000494780 SLFN13Q68D06 897 aa27.64■■■□□ 2.02
COL27A1-208ENST00000494780 ZNF467Q7Z7K2 595 aaPredicted RBP27.64■■■□□ 2.02
COL27A1-208ENST00000494780 RAVER2Q9HCJ3 691 aaKnown RBP27.64■■■□□ 2.02
COL27A1-208ENST00000494780 FAM184BQ9ULE4 1060 aa27.64■■■□□ 2.02
COL27A1-208ENST00000494780 POTEB2H3BUK9 544 aa27.63■■■□□ 2.01
COL27A1-208ENST00000494780 ADAMTS4O75173 837 aa27.63■■■□□ 2.01
COL27A1-208ENST00000494780 SNAI1O95863 264 aaPredicted RBP27.63■■■□□ 2.01
COL27A1-208ENST00000494780 FDX1P10109 184 aa27.63■■■□□ 2.01
COL27A1-208ENST00000494780 BMP3P12645 472 aa27.63■■■□□ 2.01
COL27A1-208ENST00000494780 TFAP4Q01664 338 aa27.63■■■□□ 2.01
COL27A1-208ENST00000494780 TLE2Q04725 743 aa27.63■■■□□ 2.01
COL27A1-208ENST00000494780 CHST13Q8NET6 341 aa27.63■■■□□ 2.01
COL27A1-208ENST00000494780 BADQ92934 168 aa27.63■■■□□ 2.01
COL27A1-208ENST00000494780 TSEN34Q9BSV6 310 aaKnown RBP27.63■■■□□ 2.01
COL27A1-208ENST00000494780 DNAH12Q6ZR08 3092 aa27.63■■■□□ 2.01
COL27A1-208ENST00000494780 A0A1W2PQ45 241 aaPredicted RBP27.62■■■□□ 2.01
COL27A1-208ENST00000494780 A0A1W2PQY0 241 aa27.62■■■□□ 2.01
COL27A1-208ENST00000494780 TRIM43BA6NCK2 446 aa27.62■■■□□ 2.01
COL27A1-208ENST00000494780 PPP4R3BQ5MIZ7 849 aa27.62■■■□□ 2.01
COL27A1-208ENST00000494780 SH3RF1Q7Z6J0 888 aa27.62■■■□□ 2.01
COL27A1-208ENST00000494780 TRIM43Q96BQ3 446 aaPredicted RBP27.62■■■□□ 2.01
COL27A1-208ENST00000494780 TACC3Q9Y6A5 838 aa27.62■■■□□ 2.01
COL27A1-208ENST00000494780 ANKRD35Q8N283 1001 aa27.61■■■□□ 2.01
COL27A1-208ENST00000494780 LENG1Q96BZ8 264 aaPredicted RBP27.61■■■□□ 2.01
COL27A1-208ENST00000494780 ZHX1Q9UKY1 873 aaPredicted RBP27.61■■■□□ 2.01
COL27A1-208ENST00000494780 CLTBP09497 229 aa27.6■■■□□ 2.01
COL27A1-208ENST00000494780 SHHQ15465 462 aa27.6■■■□□ 2.01
COL27A1-208ENST00000494780 GMCL1Q96IK5 515 aa27.6■■■□□ 2.01
COL27A1-208ENST00000494780 SALL3Q9BXA9 1300 aa27.6■■■□□ 2.01
COL27A1-208ENST00000494780 SYNRGQ9UMZ2 1314 aa27.6■■■□□ 2.01
COL27A1-208ENST00000494780 TMEM232C9JQI7 657 aa27.59■■■□□ 2.01
COL27A1-208ENST00000494780 STAT2P52630 851 aa27.59■■■□□ 2.01
COL27A1-208ENST00000494780 KLHDC9Q8NEP7 349 aa27.59■■■□□ 2.01
COL27A1-208ENST00000494780 CDKN2AIPQ9NXV6 580 aaPredicted RBP27.59■■■□□ 2.01
COL27A1-208ENST00000494780 ZBTB47Q9UFB7 747 aaPredicted RBP27.59■■■□□ 2.01
COL27A1-208ENST00000494780 DDX52Q9Y2R4 599 aaKnown RBP eCLIP27.59■■■□□ 2.01
COL27A1-208ENST00000494780 MOXD2PA6NHM9 499 aa27.58■■■□□ 2.01
COL27A1-208ENST00000494780 DUSP11O75319 330 aaKnown RBP27.58■■■□□ 2.01
COL27A1-208ENST00000494780 ACLYP53396 1101 aa27.58■■■□□ 2.01
COL27A1-208ENST00000494780 ACVR2BQ13705 512 aa27.58■■■□□ 2.01
COL27A1-208ENST00000494780 C9orf50Q5SZB4 431 aa27.58■■■□□ 2.01
COL27A1-208ENST00000494780 FAM160B2Q86V87 743 aa27.58■■■□□ 2.01
COL27A1-208ENST00000494780 CHURC1Q8WUH1 139 aa27.58■■■□□ 2.01
COL27A1-208ENST00000494780 NUP133Q8WUM0 1156 aa27.58■■■□□ 2.01
COL27A1-208ENST00000494780 ABHD16BQ9H3Z7 469 aa27.58■■■□□ 2.01
COL27A1-208ENST00000494780 KIAA0355O15063 1070 aa27.57■■■□□ 2
COL27A1-208ENST00000494780 FOXP2O15409 715 aa27.57■■■□□ 2
COL27A1-208ENST00000494780 SLC1A4P43007 532 aa27.57■■■□□ 2
COL27A1-208ENST00000494780 RRP1P56182 461 aaKnown RBP27.57■■■□□ 2
COL27A1-208ENST00000494780 STAG1Q8WVM7 1258 aa27.57■■■□□ 2
COL27A1-208ENST00000494780 FGD4Q96M96 766 aa27.57■■■□□ 2
COL27A1-208ENST00000494780 STARD7Q9NQZ5 370 aa27.57■■■□□ 2
COL27A1-208ENST00000494780 ISY1Q9ULR0 285 aaKnown RBP27.57■■■□□ 2
COL27A1-208ENST00000494780 PLA2G6O60733 806 aa27.56■■■□□ 2
COL27A1-208ENST00000494780 PQBP1O60828 265 aaKnown RBP27.56■■■□□ 2
COL27A1-208ENST00000494780 ANKRD45Q5TZF3 282 aa27.56■■■□□ 2
COL27A1-208ENST00000494780 CCSAPQ6IQ19 270 aaPredicted RBP27.56■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms