RNA–Protein interactions for RNA: ENST00000494742.5

PCCB-219, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 4

Gene PCCB, Length 547 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-219ENST00000494742 RASA1P20936 1047 aa17.51■□□□□ 0.39
PCCB-219ENST00000494742 KLRC3Q07444 240 aa17.51■□□□□ 0.39
PCCB-219ENST00000494742 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.51■□□□□ 0.39
PCCB-219ENST00000494742 ANKRD33Q7Z3H0 272 aa17.51■□□□□ 0.39
PCCB-219ENST00000494742 ZNF467Q7Z7K2 595 aaPredicted RBP17.51■□□□□ 0.39
PCCB-219ENST00000494742 NUP133Q8WUM0 1156 aa17.51■□□□□ 0.39
PCCB-219ENST00000494742 COL25A1Q9BXS0 654 aaPredicted RBP17.51■□□□□ 0.39
PCCB-219ENST00000494742 MKNK2Q9HBH9 465 aa17.51■□□□□ 0.39
PCCB-219ENST00000494742 ZNF287Q9HBT7 754 aa17.51■□□□□ 0.39
PCCB-219ENST00000494742 ECHDC1Q9NTX5 307 aa17.51■□□□□ 0.39
PCCB-219ENST00000494742 FAM184BQ9ULE4 1060 aa17.51■□□□□ 0.39
PCCB-219ENST00000494742 DNAJC25-GNG10A0A024R161 153 aa17.5■□□□□ 0.39
PCCB-219ENST00000494742 MOXD2PA6NHM9 499 aa17.5■□□□□ 0.39
PCCB-219ENST00000494742 GSG1L2A8MUP6 293 aa17.5■□□□□ 0.39
PCCB-219ENST00000494742 RAG1P15918 1043 aa17.5■□□□□ 0.39
PCCB-219ENST00000494742 SNRNP48Q6IEG0 339 aaKnown RBP17.5■□□□□ 0.39
PCCB-219ENST00000494742 KBTBD3Q8NAB2 608 aa17.5■□□□□ 0.39
PCCB-219ENST00000494742 DDX11Q96FC9 970 aa17.5■□□□□ 0.39
PCCB-219ENST00000494742 MYH4Q9Y623 1939 aa17.49■□□□□ 0.39
PCCB-219ENST00000494742 DCDC2CA8MYV0 355 aa17.49■□□□□ 0.39
PCCB-219ENST00000494742 ZFYP08048 801 aaPredicted RBP17.49■□□□□ 0.39
PCCB-219ENST00000494742 GNAT2P19087 354 aa17.49■□□□□ 0.39
PCCB-219ENST00000494742 ITGB8P26012 769 aa17.49■□□□□ 0.39
PCCB-219ENST00000494742 ACLYP53396 1101 aa17.49■□□□□ 0.39
PCCB-219ENST00000494742 FPGSQ05932 587 aa17.49■□□□□ 0.39
PCCB-219ENST00000494742 KLHDC9Q8NEP7 349 aa17.49■□□□□ 0.39
PCCB-219ENST00000494742 MKL1Q969V6 931 aa17.49■□□□□ 0.39
PCCB-219ENST00000494742 RNPC3Q96LT9 517 aaKnown RBP17.49■□□□□ 0.39
PCCB-219ENST00000494742 TMEM39AQ9NV64 488 aa17.49■□□□□ 0.39
PCCB-219ENST00000494742 SYNRGQ9UMZ2 1314 aa17.48■□□□□ 0.39
PCCB-219ENST00000494742 IGKV6D-41A0A0C4DH26 115 aa17.48■□□□□ 0.39
PCCB-219ENST00000494742 PQBP1O60828 265 aaKnown RBP17.48■□□□□ 0.39
PCCB-219ENST00000494742 ZBED4O75132 1171 aa17.48■□□□□ 0.39
PCCB-219ENST00000494742 DUSP11O75319 330 aaKnown RBP17.48■□□□□ 0.39
PCCB-219ENST00000494742 SNAI1O95863 264 aaPredicted RBP17.48■□□□□ 0.39
PCCB-219ENST00000494742 NDUFB10O96000 172 aa17.48■□□□□ 0.39
PCCB-219ENST00000494742 CST5P28325 142 aaPredicted RBP17.48■□□□□ 0.39
PCCB-219ENST00000494742 OAZ1P54368 228 aa17.48■□□□□ 0.39
PCCB-219ENST00000494742 FAAP100Q0VG06 881 aa17.48■□□□□ 0.39
PCCB-219ENST00000494742 CCSAPQ6IQ19 270 aaPredicted RBP17.48■□□□□ 0.39
PCCB-219ENST00000494742 MAFAQ8NHW3 353 aaPredicted RBP17.48■□□□□ 0.39
PCCB-219ENST00000494742 APPBP2Q92624 585 aa17.48■□□□□ 0.39
PCCB-219ENST00000494742 GPATCH3Q96I76 525 aa17.48■□□□□ 0.39
PCCB-219ENST00000494742 NUP88Q99567 741 aaPredicted RBP17.48■□□□□ 0.39
PCCB-219ENST00000494742 TTYH1Q9H313 450 aaPredicted RBP17.48■□□□□ 0.39
PCCB-219ENST00000494742 STARD7Q9NQZ5 370 aa17.48■□□□□ 0.39
PCCB-219ENST00000494742 FBXO40Q9UH90 709 aa17.48■□□□□ 0.39
PCCB-219ENST00000494742 RIPK3Q9Y572 518 aa17.48■□□□□ 0.39
PCCB-219ENST00000494742 ELP1O95163 1332 aa17.47■□□□□ 0.39
PCCB-219ENST00000494742 MROH7Q68CQ1 1323 aa17.47■□□□□ 0.39
PCCB-219ENST00000494742 MINDY4BA8MYZ0 360 aa17.47■□□□□ 0.39
PCCB-219ENST00000494742 FDX1P10109 184 aa17.47■□□□□ 0.39
PCCB-219ENST00000494742 ZNF444Q8N0Y2 327 aaPredicted RBP17.47■□□□□ 0.39
PCCB-219ENST00000494742 SLC38A10Q9HBR0 1119 aa17.47■□□□□ 0.39
PCCB-219ENST00000494742 CLIP2Q9UDT6 1046 aa17.47■□□□□ 0.39
PCCB-219ENST00000494742 FEM1BQ9UK73 627 aa17.47■□□□□ 0.39
PCCB-219ENST00000494742 RCAN3Q9UKA8 241 aa17.47■□□□□ 0.39
PCCB-219ENST00000494742 CTDP1Q9Y5B0 961 aaPredicted RBP17.47■□□□□ 0.39
PCCB-219ENST00000494742 RNF113AO15541 343 aaKnown RBP17.46■□□□□ 0.39
PCCB-219ENST00000494742 KCNA10Q16322 511 aa17.46■□□□□ 0.39
PCCB-219ENST00000494742 LRRFIP1Q32MZ4 808 aaKnown RBP17.46■□□□□ 0.39
PCCB-219ENST00000494742 DIEXFQ68CQ4 756 aaKnown RBP17.46■□□□□ 0.39
PCCB-219ENST00000494742 PCSK9Q8NBP7 692 aaKnown RBP17.46■□□□□ 0.39
PCCB-219ENST00000494742 GMCL1P1Q8NEA9 526 aa17.46■□□□□ 0.39
PCCB-219ENST00000494742 CHST13Q8NET6 341 aa17.46■□□□□ 0.39
PCCB-219ENST00000494742 OSBP2Q969R2 916 aa17.46■□□□□ 0.39
PCCB-219ENST00000494742 LENG1Q96BZ8 264 aaPredicted RBP17.46■□□□□ 0.39
PCCB-219ENST00000494742 GLT1D1Q96MS3 346 aa17.46■□□□□ 0.39
PCCB-219ENST00000494742 ABHD16BQ9H3Z7 469 aa17.46■□□□□ 0.39
PCCB-219ENST00000494742 SPC25Q9HBM1 224 aa17.46■□□□□ 0.39
PCCB-219ENST00000494742 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.45■□□□□ 0.38
PCCB-219ENST00000494742 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.45■□□□□ 0.38
PCCB-219ENST00000494742 SMARCA5O60264 1052 aaPredicted RBP17.45■□□□□ 0.38
PCCB-219ENST00000494742 TIMP1P01033 207 aa17.45■□□□□ 0.38
PCCB-219ENST00000494742 EPHB4P54760 987 aa17.45■□□□□ 0.38
PCCB-219ENST00000494742 ACVR2BQ13705 512 aa17.45■□□□□ 0.38
PCCB-219ENST00000494742 CPXCR1Q8N123 301 aa17.45■□□□□ 0.38
PCCB-219ENST00000494742 ANKRD35Q8N283 1001 aa17.45■□□□□ 0.38
PCCB-219ENST00000494742 MYLIPQ8WY64 445 aa17.45■□□□□ 0.38
PCCB-219ENST00000494742 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.45■□□□□ 0.38
PCCB-219ENST00000494742 MTMR4Q9NYA4 1195 aa17.45■□□□□ 0.38
PCCB-219ENST00000494742 ZHX1Q9UKY1 873 aaPredicted RBP17.45■□□□□ 0.38
PCCB-219ENST00000494742 PLIN4Q96Q06 1357 aa17.44■□□□□ 0.38
PCCB-219ENST00000494742 GPAA1O43292 621 aa17.44■□□□□ 0.38
PCCB-219ENST00000494742 TTLL1O95922 423 aa17.44■□□□□ 0.38
PCCB-219ENST00000494742 FOSL2P15408 326 aa17.44■□□□□ 0.38
PCCB-219ENST00000494742 TDO2P48775 406 aa17.44■□□□□ 0.38
PCCB-219ENST00000494742 CDK7P50613 346 aa17.44■□□□□ 0.38
PCCB-219ENST00000494742 GJA9P57773 515 aa17.44■□□□□ 0.38
PCCB-219ENST00000494742 NKX3-2P78367 333 aa17.44■□□□□ 0.38
PCCB-219ENST00000494742 CCDC174Q6PII3 467 aa17.44■□□□□ 0.38
PCCB-219ENST00000494742 KIFC2Q96AC6 838 aa17.44■□□□□ 0.38
PCCB-219ENST00000494742 CEP95Q96GE4 821 aa17.44■□□□□ 0.38
PCCB-219ENST00000494742 UPF3AQ9H1J1 476 aaKnown RBP17.44■□□□□ 0.38
PCCB-219ENST00000494742 DCTPP1Q9H773 170 aa17.44■□□□□ 0.38
PCCB-219ENST00000494742 TBX21Q9UL17 535 aa17.44■□□□□ 0.38
PCCB-219ENST00000494742 PATL2C9JE40 543 aaKnown RBP17.43■□□□□ 0.38
PCCB-219ENST00000494742 C6orf222P0C671 652 aaPredicted RBP17.43■□□□□ 0.38
PCCB-219ENST00000494742 MFSD5Q6N075 450 aa17.43■□□□□ 0.38
PCCB-219ENST00000494742 STK11IPQ8N1F8 1099 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms