RNA–Protein interactions for RNA: ENST00000494339.5

KPNA1-210, Transcript of karyopherin subunit alpha 1, humanhuman

TSL 2

Gene KPNA1, Length 1,923 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA1-210ENST00000494339 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.74■■□□□ 1.39
KPNA1-210ENST00000494339 U2AF2P26368 475 aaKnown RBP eCLIP23.74■■□□□ 1.391e-6■■■□□ 15.3
KPNA1-210ENST00000494339 NLRP5P59047 1200 aa23.74■■□□□ 1.39
KPNA1-210ENST00000494339 NR5A1Q13285 461 aa23.74■■□□□ 1.39
KPNA1-210ENST00000494339 BARHL2Q9NY43 387 aa23.74■■□□□ 1.39
KPNA1-210ENST00000494339 STXBP3O00186 592 aa23.73■■□□□ 1.39
KPNA1-210ENST00000494339 NF2P35240 595 aa23.73■■□□□ 1.39
KPNA1-210ENST00000494339 MAP1SQ66K74 1059 aaPredicted RBP23.73■■□□□ 1.39
KPNA1-210ENST00000494339 SH3GLB2Q9NR46 395 aa23.73■■□□□ 1.39
KPNA1-210ENST00000494339 SPP2Q13103 211 aa23.72■■□□□ 1.39
KPNA1-210ENST00000494339 DGKZQ13574 1117 aa23.72■■□□□ 1.39
KPNA1-210ENST00000494339 MTMR2Q13614 643 aa23.72■■□□□ 1.39
KPNA1-210ENST00000494339 ZNF526Q8TF50 670 aaPredicted RBP23.72■■□□□ 1.39
KPNA1-210ENST00000494339 FTOQ9C0B1 505 aaKnown RBP eCLIP23.72■■□□□ 1.39
KPNA1-210ENST00000494339 FOXP1Q9H334 677 aaPredicted RBP23.72■■□□□ 1.39
KPNA1-210ENST00000494339 ZHX2Q9Y6X8 837 aa23.72■■□□□ 1.39
KPNA1-210ENST00000494339 OTOFQ9HC10 1997 aa23.72■■□□□ 1.39
KPNA1-210ENST00000494339 KRT2P35908 639 aa23.72■■□□□ 1.39
KPNA1-210ENST00000494339 CEBPZQ03701 1054 aaKnown RBP23.72■■□□□ 1.39
KPNA1-210ENST00000494339 VGLL4Q14135 290 aa23.72■■□□□ 1.39
KPNA1-210ENST00000494339 NPY5RQ15761 445 aa23.72■■□□□ 1.39
KPNA1-210ENST00000494339 NOL9Q5SY16 702 aaKnown RBP23.72■■□□□ 1.39
KPNA1-210ENST00000494339 MYSM1Q5VVJ2 828 aa23.72■■□□□ 1.39
KPNA1-210ENST00000494339 PPP1R3FQ6ZSY5 799 aaPredicted RBP23.72■■□□□ 1.39
KPNA1-210ENST00000494339 NOSTRINQ8IVI9 506 aa23.72■■□□□ 1.39
KPNA1-210ENST00000494339 KIAA1683Q9H0B3 1180 aa23.72■■□□□ 1.39
KPNA1-210ENST00000494339 AS3MTQ9HBK9 375 aa23.72■■□□□ 1.39
KPNA1-210ENST00000494339 PHIPQ8WWQ0 1821 aa23.71■■□□□ 1.39
KPNA1-210ENST00000494339 PNMA6FA0A0J9YX94 578 aa23.71■■□□□ 1.39
KPNA1-210ENST00000494339 MAP3K9P80192 1104 aa23.71■■□□□ 1.39
KPNA1-210ENST00000494339 TTLL12Q14166 644 aaPredicted RBP23.71■■□□□ 1.39
KPNA1-210ENST00000494339 BRMS1Q9HCU9 246 aa23.71■■□□□ 1.39
KPNA1-210ENST00000494339 TRIM75PA6NK02 468 aa23.71■■□□□ 1.39
KPNA1-210ENST00000494339 ZBTB5O15062 677 aa23.71■■□□□ 1.39
KPNA1-210ENST00000494339 IREB2P48200 963 aaKnown RBP23.71■■□□□ 1.39
KPNA1-210ENST00000494339 STAT2P52630 851 aa23.71■■□□□ 1.39
KPNA1-210ENST00000494339 NAPAP54920 295 aa23.71■■□□□ 1.39
KPNA1-210ENST00000494339 GSE1Q14687 1217 aa23.71■■□□□ 1.39
KPNA1-210ENST00000494339 KLHL40Q2TBA0 621 aa23.71■■□□□ 1.39
KPNA1-210ENST00000494339 SYDE2Q5VT97 1194 aa23.71■■□□□ 1.39
KPNA1-210ENST00000494339 MOB2Q70IA6 237 aa23.71■■□□□ 1.39
KPNA1-210ENST00000494339 ZNF280CQ8ND82 737 aa23.71■■□□□ 1.39
KPNA1-210ENST00000494339 CCDC148Q8NFR7 591 aa23.71■■□□□ 1.39
KPNA1-210ENST00000494339 MTMR8Q96EF0 704 aa23.71■■□□□ 1.39
KPNA1-210ENST00000494339 ZNF396Q96N95 335 aaPredicted RBP23.71■■□□□ 1.39
KPNA1-210ENST00000494339 USP28Q96RU2 1077 aa23.71■■□□□ 1.39
KPNA1-210ENST00000494339 WDR18Q9BV38 432 aa23.71■■□□□ 1.39
KPNA1-210ENST00000494339 SNAP25P60880 206 aa23.7■■□□□ 1.38
KPNA1-210ENST00000494339 CDC37Q16543 378 aaPredicted RBP23.7■■□□□ 1.38
KPNA1-210ENST00000494339 BTNL9Q6UXG8 535 aa23.7■■□□□ 1.38
KPNA1-210ENST00000494339 TMEM87AQ8NBN3 555 aa23.7■■□□□ 1.38
KPNA1-210ENST00000494339 COA7Q96BR5 231 aa23.7■■□□□ 1.38
KPNA1-210ENST00000494339 NMRK2Q9NPI5 230 aa23.7■■□□□ 1.38
KPNA1-210ENST00000494339 CFAP45Q9UL16 551 aa23.7■■□□□ 1.38
KPNA1-210ENST00000494339 SNCAIPQ9Y6H5 919 aa23.7■■□□□ 1.38
KPNA1-210ENST00000494339 DDX49Q9Y6V7 483 aaKnown RBP23.7■■□□□ 1.38
KPNA1-210ENST00000494339 PAPPA2Q9BXP8 1791 aa23.7■■□□□ 1.38
KPNA1-210ENST00000494339 ADAMTS3O15072 1205 aa23.69■■□□□ 1.38
KPNA1-210ENST00000494339 PPP1R11O60927 126 aaPredicted RBP23.69■■□□□ 1.38
KPNA1-210ENST00000494339 CALML3P27482 149 aa23.69■■□□□ 1.38
KPNA1-210ENST00000494339 CSPP1Q1MSJ5 1256 aa23.69■■□□□ 1.38
KPNA1-210ENST00000494339 QRICH1Q2TAL8 776 aa23.69■■□□□ 1.38
KPNA1-210ENST00000494339 CSADQ9Y600 493 aa23.69■■□□□ 1.38
KPNA1-210ENST00000494339 TRAF5O00463 557 aa23.69■■□□□ 1.38
KPNA1-210ENST00000494339 BACE1P56817 501 aa23.69■■□□□ 1.38
KPNA1-210ENST00000494339 SAMD1Q6SPF0 538 aaPredicted RBP23.69■■□□□ 1.38
KPNA1-210ENST00000494339 CCDC12Q8WUD4 166 aaPredicted RBP23.69■■□□□ 1.38
KPNA1-210ENST00000494339 LPAR1Q92633 364 aa23.69■■□□□ 1.38
KPNA1-210ENST00000494339 SPATA32Q96LK8 384 aa23.69■■□□□ 1.38
KPNA1-210ENST00000494339 SCAND2PQ9GZW5 306 aaPredicted RBP23.69■■□□□ 1.38
KPNA1-210ENST00000494339 PRR12Q9ULL5 1215 aa23.69■■□□□ 1.38
KPNA1-210ENST00000494339 TPRNQ4KMQ1 711 aa23.68■■□□□ 1.38
KPNA1-210ENST00000494339 EMILIN3Q9NT22 766 aa23.68■■□□□ 1.38
KPNA1-210ENST00000494339 PCDHA4Q9UN74 947 aa23.68■■□□□ 1.38
KPNA1-210ENST00000494339 hCG_1984214I3L0E3 225 aa23.67■■□□□ 1.38
KPNA1-210ENST00000494339 USP14P54578 494 aa23.67■■□□□ 1.38
KPNA1-210ENST00000494339 FMR1Q06787 632 aaKnown RBP eCLIP23.67■■□□□ 1.389e-6■□□□□ 9.4
KPNA1-210ENST00000494339 ATL3Q6DD88 541 aa23.67■■□□□ 1.38
KPNA1-210ENST00000494339 BLIDQ8IZY5 108 aa23.67■■□□□ 1.38
KPNA1-210ENST00000494339 ZNF713Q8N859 430 aaPredicted RBP23.67■■□□□ 1.38
KPNA1-210ENST00000494339 LEO1Q8WVC0 666 aaPredicted RBP23.67■■□□□ 1.38
KPNA1-210ENST00000494339 KIFC2Q96AC6 838 aa23.67■■□□□ 1.38
KPNA1-210ENST00000494339 FBXO28Q9NVF7 368 aa23.67■■□□□ 1.38
KPNA1-210ENST00000494339 FAM205CA6NFA0 338 aa23.67■■□□□ 1.38
KPNA1-210ENST00000494339 SMCO2A6NFE2 343 aa23.67■■□□□ 1.38
KPNA1-210ENST00000494339 WDR46O15213 610 aaKnown RBP23.67■■□□□ 1.38
KPNA1-210ENST00000494339 EARS2Q5JPH6 523 aaKnown RBP23.67■■□□□ 1.38
KPNA1-210ENST00000494339 CHURC1Q8WUH1 139 aa23.67■■□□□ 1.38
KPNA1-210ENST00000494339 ZMYND12Q9H0C1 365 aa23.67■■□□□ 1.38
KPNA1-210ENST00000494339 ZNF408Q9H9D4 720 aa23.67■■□□□ 1.38
KPNA1-210ENST00000494339 GADD45BO75293 160 aaPredicted RBP23.66■■□□□ 1.38
KPNA1-210ENST00000494339 VCAM1P19320 739 aa23.66■■□□□ 1.38
KPNA1-210ENST00000494339 NOM1Q5C9Z4 860 aaKnown RBP23.66■■□□□ 1.38
KPNA1-210ENST00000494339 CNKSR2Q8WXI2 1034 aa23.66■■□□□ 1.38
KPNA1-210ENST00000494339 TNFRSF25Q93038 417 aa23.66■■□□□ 1.38
KPNA1-210ENST00000494339 CLMNQ96JQ2 1002 aa23.66■■□□□ 1.38
KPNA1-210ENST00000494339 FEM1BQ9UK73 627 aa23.66■■□□□ 1.38
KPNA1-210ENST00000494339 CLIC4Q9Y696 253 aa23.66■■□□□ 1.38
KPNA1-210ENST00000494339 MBD3O95983 291 aa23.65■■□□□ 1.38
KPNA1-210ENST00000494339 HMGCS2P54868 508 aa23.65■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms