RNA–Protein interactions for RNA: ENST00000494327.1

HPS3-207, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 3

Gene HPS3, Length 556 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-207ENST00000494327 XRN2Q9H0D6 950 aaKnown RBP eCLIP25.82■■□□□ 1.72
HPS3-207ENST00000494327 B4E1Z4 1266 aa25.81■■□□□ 1.72
HPS3-207ENST00000494327 SGSM2O43147 1006 aa25.81■■□□□ 1.72
HPS3-207ENST00000494327 SGPL1O95470 568 aa25.81■■□□□ 1.72
HPS3-207ENST00000494327 TFRCP02786 760 aaKnown RBP25.81■■□□□ 1.72
HPS3-207ENST00000494327 TOP1P11387 765 aaKnown RBP25.81■■□□□ 1.72
HPS3-207ENST00000494327 FCER1AP12319 257 aa25.81■■□□□ 1.72
HPS3-207ENST00000494327 PRKAR2AP13861 404 aaKnown RBP25.81■■□□□ 1.72
HPS3-207ENST00000494327 STAT2P52630 851 aa25.81■■□□□ 1.72
HPS3-207ENST00000494327 CCDC96Q2M329 555 aa25.81■■□□□ 1.72
HPS3-207ENST00000494327 SNRNP48Q6IEG0 339 aaKnown RBP25.81■■□□□ 1.72
HPS3-207ENST00000494327 CHURC1Q8WUH1 139 aa25.81■■□□□ 1.72
HPS3-207ENST00000494327 RAVER2Q9HCJ3 691 aaKnown RBP25.81■■□□□ 1.72
HPS3-207ENST00000494327 FLRT1Q9NZU1 646 aa25.81■■□□□ 1.72
HPS3-207ENST00000494327 RPTORQ8N122 1335 aa25.81■■□□□ 1.72
HPS3-207ENST00000494327 RBBP6Q7Z6E9 1792 aaKnown RBP25.8■■□□□ 1.72
HPS3-207ENST00000494327 CACNB2Q08289 660 aaPredicted RBP25.8■■□□□ 1.72
HPS3-207ENST00000494327 FAM160B2Q86V87 743 aa25.8■■□□□ 1.72
HPS3-207ENST00000494327 MMP19Q99542 508 aa25.8■■□□□ 1.72
HPS3-207ENST00000494327 TEX13BQ9BXU2 312 aa25.8■■□□□ 1.72
HPS3-207ENST00000494327 PAK6Q9NQU5 681 aaPredicted RBP25.8■■□□□ 1.72
HPS3-207ENST00000494327 PARP14Q460N5 1801 aa25.79■■□□□ 1.72
HPS3-207ENST00000494327 COBLO75128 1261 aa25.79■■□□□ 1.72
HPS3-207ENST00000494327 HOXC6P09630 235 aa25.79■■□□□ 1.72
HPS3-207ENST00000494327 MFSD14CQ5VZR4 134 aa25.79■■□□□ 1.72
HPS3-207ENST00000494327 TTC14Q96N46 770 aa25.79■■□□□ 1.72
HPS3-207ENST00000494327 SLC38A10Q9HBR0 1119 aa25.79■■□□□ 1.72
HPS3-207ENST00000494327 SLC5A4Q9NY91 659 aa25.79■■□□□ 1.72
HPS3-207ENST00000494327 KIAA0100Q14667 2235 aaKnown RBP25.79■■□□□ 1.72
HPS3-207ENST00000494327 COPB2P35606 906 aa25.78■■□□□ 1.72
HPS3-207ENST00000494327 KCTD2Q14681 263 aa25.78■■□□□ 1.72
HPS3-207ENST00000494327 IQCA1Q86XH1 822 aa25.78■■□□□ 1.72
HPS3-207ENST00000494327 ABRAQ8N0Z2 381 aa25.78■■□□□ 1.72
HPS3-207ENST00000494327 DCAF4Q8WV16 495 aa25.78■■□□□ 1.72
HPS3-207ENST00000494327 KRT23Q9C075 422 aa25.78■■□□□ 1.72
HPS3-207ENST00000494327 ZSWIM5Q9P217 1185 aa25.78■■□□□ 1.72
HPS3-207ENST00000494327 RIPK3Q9Y572 518 aa25.78■■□□□ 1.72
HPS3-207ENST00000494327 MAP3K21Q5TCX8 1036 aa25.77■■□□□ 1.72
HPS3-207ENST00000494327 CNNM2Q9H8M5 875 aa25.77■■□□□ 1.72
HPS3-207ENST00000494327 GPCPD1Q9NPB8 672 aa25.77■■□□□ 1.72
HPS3-207ENST00000494327 U3KPZ7 1027 aaPredicted RBP25.77■■□□□ 1.72
HPS3-207ENST00000494327 FRMPD2Q68DX3 1309 aaPredicted RBP25.77■■□□□ 1.72
HPS3-207ENST00000494327 COL11A1P12107 1806 aaPredicted RBP25.77■■□□□ 1.72
HPS3-207ENST00000494327 PGK2P07205 417 aa25.76■■□□□ 1.71
HPS3-207ENST00000494327 CCND3P30281 292 aaPredicted RBP25.76■■□□□ 1.71
HPS3-207ENST00000494327 CYP2C19P33261 490 aa25.76■■□□□ 1.71
HPS3-207ENST00000494327 SNAP25P60880 206 aa25.76■■□□□ 1.71
HPS3-207ENST00000494327 TTBK2Q6IQ55 1244 aa25.76■■□□□ 1.71
HPS3-207ENST00000494327 KIAA1211Q6ZU35 1233 aa25.76■■□□□ 1.71
HPS3-207ENST00000494327 ATP2A1O14983 1001 aa25.75■■□□□ 1.71
HPS3-207ENST00000494327 CYP21A2P08686 494 aa25.75■■□□□ 1.71
HPS3-207ENST00000494327 FDX1P10109 184 aa25.75■■□□□ 1.71
HPS3-207ENST00000494327 SLC16A2P36021 539 aa25.75■■□□□ 1.71
HPS3-207ENST00000494327 NT5C2P49902 561 aa25.75■■□□□ 1.71
HPS3-207ENST00000494327 CCDC178Q5BJE1 867 aa25.75■■□□□ 1.71
HPS3-207ENST00000494327 BMP2KLQ5H9B9 411 aa25.75■■□□□ 1.71
HPS3-207ENST00000494327 DGKHQ86XP1 1220 aa25.75■■□□□ 1.71
HPS3-207ENST00000494327 ZSCAN10Q96SZ4 725 aaPredicted RBP25.75■■□□□ 1.71
HPS3-207ENST00000494327 PRR12Q9ULL5 1215 aa25.75■■□□□ 1.71
HPS3-207ENST00000494327 PLA2G6O60733 806 aa25.74■■□□□ 1.71
HPS3-207ENST00000494327 CCDC174Q6PII3 467 aa25.74■■□□□ 1.71
HPS3-207ENST00000494327 HOMER2Q9NSB8 354 aa25.74■■□□□ 1.71
HPS3-207ENST00000494327 FARP2O94887 1054 aaPredicted RBP25.73■■□□□ 1.71
HPS3-207ENST00000494327 PDHBP11177 359 aa25.73■■□□□ 1.71
HPS3-207ENST00000494327 CNGA1P29973 690 aa25.73■■□□□ 1.71
HPS3-207ENST00000494327 OAZ1P54368 228 aa25.73■■□□□ 1.71
HPS3-207ENST00000494327 TRDNQ13061 729 aa25.73■■□□□ 1.71
HPS3-207ENST00000494327 MAP4K1Q92918 833 aa25.73■■□□□ 1.71
HPS3-207ENST00000494327 DDX11Q96FC9 970 aa25.73■■□□□ 1.71
HPS3-207ENST00000494327 AGBL1Q96MI9 1066 aa25.73■■□□□ 1.71
HPS3-207ENST00000494327 ESYT1Q9BSJ8 1104 aa25.73■■□□□ 1.71
HPS3-207ENST00000494327 UBAC1Q9BSL1 405 aa25.73■■□□□ 1.71
HPS3-207ENST00000494327 CRISPLD2Q9H0B8 497 aa25.73■■□□□ 1.71
HPS3-207ENST00000494327 KAT14Q9H8E8 782 aa25.73■■□□□ 1.71
HPS3-207ENST00000494327 LAMA4Q16363 1823 aa25.72■■□□□ 1.71
HPS3-207ENST00000494327 OLFML2BQ68BL8 750 aa25.72■■□□□ 1.71
HPS3-207ENST00000494327 MAML3Q96JK9 1138 aa25.72■■□□□ 1.71
HPS3-207ENST00000494327 RBM8AQ9Y5S9 174 aaKnown RBP25.72■■□□□ 1.71
HPS3-207ENST00000494327 TNKSO95271 1327 aa25.71■■□□□ 1.71
HPS3-207ENST00000494327 ENAHQ8N8S7 591 aaPredicted RBP25.71■■□□□ 1.71
HPS3-207ENST00000494327 PNMA1Q8ND90 353 aa25.71■■□□□ 1.71
HPS3-207ENST00000494327 TAF6LQ9Y6J9 622 aa25.71■■□□□ 1.71
HPS3-207ENST00000494327 ZNF536O15090 1300 aa25.7■■□□□ 1.71
HPS3-207ENST00000494327 BRCA2P51587 3418 aa25.7■■□□□ 1.7
HPS3-207ENST00000494327 ZNF792Q3KQV3 632 aa25.7■■□□□ 1.7
HPS3-207ENST00000494327 SYDE2Q5VT97 1194 aa25.7■■□□□ 1.7
HPS3-207ENST00000494327 CYB5R4Q7L1T6 521 aa25.7■■□□□ 1.7
HPS3-207ENST00000494327 ANKRD35Q8N283 1001 aa25.7■■□□□ 1.7
HPS3-207ENST00000494327 CHST13Q8NET6 341 aa25.7■■□□□ 1.7
HPS3-207ENST00000494327 FBXO40Q9UH90 709 aa25.7■■□□□ 1.7
HPS3-207ENST00000494327 TNRC18O15417 2968 aaPredicted RBP25.69■■□□□ 1.7
HPS3-207ENST00000494327 E7EWF7 191 aa25.69■■□□□ 1.7
HPS3-207ENST00000494327 GOLGA8HP0CJ92 632 aa25.69■■□□□ 1.7
HPS3-207ENST00000494327 ALAS1P13196 640 aa25.69■■□□□ 1.7
HPS3-207ENST00000494327 ZNF543Q08ER8 600 aa25.69■■□□□ 1.7
HPS3-207ENST00000494327 PRAMEF19Q5SWL8 479 aa25.69■■□□□ 1.7
HPS3-207ENST00000494327 BTNL9Q6UXG8 535 aa25.69■■□□□ 1.7
HPS3-207ENST00000494327 RALYLQ86SE5 291 aaKnown RBP25.69■■□□□ 1.7
HPS3-207ENST00000494327 ANKS1AQ92625 1134 aa25.69■■□□□ 1.7
HPS3-207ENST00000494327 LSG1Q9H089 658 aaKnown RBP25.69■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms