RNA–Protein interactions for RNA: ENST00000494090.6

COL27A1-207, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 5,329 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-207ENST00000494090 XPO5Q9HAV4 1204 aaKnown RBP eCLIP21.12■□□□□ 0.972e-8■■■■□ 23.3
COL27A1-207ENST00000494090 DBNLQ9UJU6 430 aaKnown RBP21.12■□□□□ 0.97
COL27A1-207ENST00000494090 ZNF215Q9UL58 517 aaPredicted RBP21.12■□□□□ 0.97
COL27A1-207ENST00000494090 ATP11AP98196 1134 aa21.12■□□□□ 0.97
COL27A1-207ENST00000494090 MYO5CQ9NQX4 1742 aa21.12■□□□□ 0.97
COL27A1-207ENST00000494090 IGSF1Q8N6C5 1336 aa21.12■□□□□ 0.97
COL27A1-207ENST00000494090 MIER3Q7Z3K6 550 aa21.12■□□□□ 0.97
COL27A1-207ENST00000494090 STMN2Q93045 179 aa21.12■□□□□ 0.97
COL27A1-207ENST00000494090 PPP6R2O75170 966 aa21.11■□□□□ 0.97
COL27A1-207ENST00000494090 SMCR8Q8TEV9 937 aaPredicted RBP21.11■□□□□ 0.97
COL27A1-207ENST00000494090 CLIC6Q96NY7 704 aa21.11■□□□□ 0.97
COL27A1-207ENST00000494090 KDM6BO15054 1643 aa21.11■□□□□ 0.97
COL27A1-207ENST00000494090 CD2BP2O95400 341 aaKnown RBP21.11■□□□□ 0.97
COL27A1-207ENST00000494090 SLC39A14Q15043 492 aa21.11■□□□□ 0.97
COL27A1-207ENST00000494090 DEPTORQ8TB45 409 aa21.11■□□□□ 0.97
COL27A1-207ENST00000494090 RAB17Q9H0T7 212 aa21.11■□□□□ 0.97
COL27A1-207ENST00000494090 HYOU1Q9Y4L1 999 aa21.11■□□□□ 0.97
COL27A1-207ENST00000494090 APBA3O96018 575 aa21.11■□□□□ 0.97
COL27A1-207ENST00000494090 ANTXR1Q9H6X2 564 aa21.11■□□□□ 0.97
COL27A1-207ENST00000494090 TRPC6Q9Y210 931 aa21.11■□□□□ 0.97
COL27A1-207ENST00000494090 N4BP1O75113 896 aaKnown RBP21.11■□□□□ 0.97
COL27A1-207ENST00000494090 SLFN12Q8IYM2 578 aa21.11■□□□□ 0.97
COL27A1-207ENST00000494090 OR52Z1P0C646 297 aa21.1■□□□□ 0.97
COL27A1-207ENST00000494090 MAEAQ7L5Y9 396 aa21.1■□□□□ 0.97
COL27A1-207ENST00000494090 CCDC105Q8IYK2 499 aa21.1■□□□□ 0.97
COL27A1-207ENST00000494090 CHAMP1Q96JM3 812 aa21.1■□□□□ 0.97
COL27A1-207ENST00000494090 AMFRQ9UKV5 643 aa21.1■□□□□ 0.97
COL27A1-207ENST00000494090 LONP1P36776 959 aaKnown RBP21.1■□□□□ 0.97
COL27A1-207ENST00000494090 GTF2IP78347 998 aa21.1■□□□□ 0.97
COL27A1-207ENST00000494090 MCF2L2Q86YR7 1114 aa21.1■□□□□ 0.97
COL27A1-207ENST00000494090 PNMA1Q8ND90 353 aa21.1■□□□□ 0.97
COL27A1-207ENST00000494090 CABS1Q96KC9 395 aa21.1■□□□□ 0.97
COL27A1-207ENST00000494090 PARP2Q9UGN5 583 aa21.1■□□□□ 0.97
COL27A1-207ENST00000494090 LTKP29376 864 aa21.1■□□□□ 0.97
COL27A1-207ENST00000494090 ZNF827Q17R98 1081 aa21.1■□□□□ 0.97
COL27A1-207ENST00000494090 SDR42E1Q8WUS8 393 aa21.1■□□□□ 0.97
COL27A1-207ENST00000494090 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.1■□□□□ 0.976e-13■■□□□ 11.5
COL27A1-207ENST00000494090 ZFYVE16Q7Z3T8 1539 aa21.1■□□□□ 0.97
COL27A1-207ENST00000494090 BCAMP50895 628 aa21.1■□□□□ 0.97
COL27A1-207ENST00000494090 GPIHBP1Q8IV16 184 aa21.1■□□□□ 0.97
COL27A1-207ENST00000494090 ZBTB8OSQ8IWT0 167 aa21.1■□□□□ 0.97
COL27A1-207ENST00000494090 POLR3EQ9NVU0 708 aa21.1■□□□□ 0.97
COL27A1-207ENST00000494090 DDX41Q9UJV9 622 aaKnown RBP21.1■□□□□ 0.97
COL27A1-207ENST00000494090 CCDC160A6NGH7 325 aa21.09■□□□□ 0.97
COL27A1-207ENST00000494090 ZWINTO95229 277 aa21.09■□□□□ 0.97
COL27A1-207ENST00000494090 RPN1P04843 607 aaKnown RBP21.09■□□□□ 0.97
COL27A1-207ENST00000494090 XRCC5P13010 732 aaKnown RBP21.09■□□□□ 0.97
COL27A1-207ENST00000494090 NEK8Q86SG6 692 aa21.09■□□□□ 0.97
COL27A1-207ENST00000494090 GPBP1Q86WP2 473 aa21.09■□□□□ 0.97
COL27A1-207ENST00000494090 ZNF710Q8N1W2 664 aa21.09■□□□□ 0.97
COL27A1-207ENST00000494090 KRT19P08727 400 aa21.09■□□□□ 0.97
COL27A1-207ENST00000494090 TECP42680 631 aa21.09■□□□□ 0.97
COL27A1-207ENST00000494090 TSC1Q92574 1164 aa21.09■□□□□ 0.97
COL27A1-207ENST00000494090 GLG1Q92896 1179 aa21.09■□□□□ 0.97
COL27A1-207ENST00000494090 RIOK1Q9BRS2 568 aaKnown RBP21.09■□□□□ 0.97
COL27A1-207ENST00000494090 CYP21A2P08686 494 aa21.09■□□□□ 0.97
COL27A1-207ENST00000494090 HSPA1LP34931 641 aa21.09■□□□□ 0.97
COL27A1-207ENST00000494090 MIS12Q9H081 205 aa21.09■□□□□ 0.97
COL27A1-207ENST00000494090 PPFIA4O75335 1185 aa21.08■□□□□ 0.97
COL27A1-207ENST00000494090 STAT1P42224 750 aa21.08■□□□□ 0.97
COL27A1-207ENST00000494090 GYG1P46976 350 aa21.08■□□□□ 0.97
COL27A1-207ENST00000494090 PYCARDQ9ULZ3 195 aa21.08■□□□□ 0.97
COL27A1-207ENST00000494090 PPP2R5EQ16537 467 aa21.08■□□□□ 0.97
COL27A1-207ENST00000494090 NSUN7Q8NE18 718 aaKnown RBP21.08■□□□□ 0.97
COL27A1-207ENST00000494090 FOXP1Q9H334 677 aaPredicted RBP21.08■□□□□ 0.97
COL27A1-207ENST00000494090 TLR7Q9NYK1 1049 aaKnown RBP21.08■□□□□ 0.97
COL27A1-207ENST00000494090 CARMIL3Q8ND23 1372 aa21.08■□□□□ 0.97
COL27A1-207ENST00000494090 CFAP74Q9C0B2 1584 aa21.08■□□□□ 0.97
COL27A1-207ENST00000494090 SYMPKQ92797 1274 aaKnown RBP21.08■□□□□ 0.97
COL27A1-207ENST00000494090 CNKSR1Q969H4 720 aa21.08■□□□□ 0.97
COL27A1-207ENST00000494090 PDE8BO95263 885 aa21.08■□□□□ 0.96
COL27A1-207ENST00000494090 TNNI1P19237 187 aa21.08■□□□□ 0.96
COL27A1-207ENST00000494090 KRT26Q7Z3Y9 468 aa21.08■□□□□ 0.96
COL27A1-207ENST00000494090 TPH2Q8IWU9 490 aa21.08■□□□□ 0.96
COL27A1-207ENST00000494090 PFDN4Q9NQP4 134 aa21.08■□□□□ 0.96
COL27A1-207ENST00000494090 MAP3K15Q6ZN16 1313 aa21.08■□□□□ 0.96
COL27A1-207ENST00000494090 LONRF2Q1L5Z9 754 aa21.08■□□□□ 0.96
COL27A1-207ENST00000494090 CFAP65Q6ZU64 1925 aaKnown RBP21.07■□□□□ 0.96
COL27A1-207ENST00000494090 PROSER3Q2NL68 480 aa21.07■□□□□ 0.96
COL27A1-207ENST00000494090 MAGEF1Q9HAY2 307 aa21.07■□□□□ 0.96
COL27A1-207ENST00000494090 TCP1P17987 556 aaKnown RBP21.07■□□□□ 0.96
COL27A1-207ENST00000494090 U2AF1L4Q8WU68 220 aaKnown RBP21.07■□□□□ 0.96
COL27A1-207ENST00000494090 GSDMAQ96QA5 445 aa21.07■□□□□ 0.96
COL27A1-207ENST00000494090 IKBKBO14920 756 aa21.07■□□□□ 0.96
COL27A1-207ENST00000494090 POLR2MP0CAP2 368 aa21.07■□□□□ 0.96
COL27A1-207ENST00000494090 KRT71Q3SY84 523 aa21.07■□□□□ 0.96
COL27A1-207ENST00000494090 PROCA1Q8NCQ7 364 aaPredicted RBP21.07■□□□□ 0.96
COL27A1-207ENST00000494090 PSTPIP2Q9H939 334 aa21.07■□□□□ 0.96
COL27A1-207ENST00000494090 KLRF2D3W0D1 207 aa21.07■□□□□ 0.96
COL27A1-207ENST00000494090 PTGDRQ13258 359 aa21.07■□□□□ 0.96
COL27A1-207ENST00000494090 DENND2CQ68D51 928 aa21.07■□□□□ 0.96
COL27A1-207ENST00000494090 CCDC24Q8N4L8 307 aa21.07■□□□□ 0.96
COL27A1-207ENST00000494090 DDX17Q92841 729 aaKnown RBP21.07■□□□□ 0.96
COL27A1-207ENST00000494090 KIF11P52732 1056 aa21.06■□□□□ 0.96
COL27A1-207ENST00000494090 ARHGAP44Q17R89 818 aa21.06■□□□□ 0.96
COL27A1-207ENST00000494090 UIMC1Q96RL1 719 aa21.06■□□□□ 0.96
COL27A1-207ENST00000494090 PCDHA12Q9UN75 941 aa21.06■□□□□ 0.96
COL27A1-207ENST00000494090 USTQ9Y2C2 406 aa21.06■□□□□ 0.96
COL27A1-207ENST00000494090 MAP7Q14244 749 aa21.06■□□□□ 0.96
COL27A1-207ENST00000494090 MLXIPQ9HAP2 919 aa21.06■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms