RNA–Protein interactions for RNA: ENST00000494047.5

RFC4-214, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 1,393 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-214ENST00000494047 RETREG2Q8NC44 543 aa12.97□□□□□ -0.33
RFC4-214ENST00000494047 DAGLBQ8NCG7 672 aa12.97□□□□□ -0.33
RFC4-214ENST00000494047 ANKS1AQ92625 1134 aa12.97□□□□□ -0.33
RFC4-214ENST00000494047 PAGE5Q96GU1 130 aa12.97□□□□□ -0.33
RFC4-214ENST00000494047 MYL10Q9BUA6 226 aa12.97□□□□□ -0.33
RFC4-214ENST00000494047 CALCOCO1Q9P1Z2 691 aa12.97□□□□□ -0.33
RFC4-214ENST00000494047 ADD3Q9UEY8 706 aaKnown RBP12.97□□□□□ -0.33
RFC4-214ENST00000494047 KCNJ14Q9UNX9 436 aa12.97□□□□□ -0.33
RFC4-214ENST00000494047 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.97□□□□□ -0.33
RFC4-214ENST00000494047 SBF1O95248 1867 aa12.96□□□□□ -0.33
RFC4-214ENST00000494047 A0A1W2PQC6 194 aa12.96□□□□□ -0.33
RFC4-214ENST00000494047 FAM177BA6PVY3 158 aa12.96□□□□□ -0.33
RFC4-214ENST00000494047 MINDY4BA8MYZ0 360 aa12.96□□□□□ -0.33
RFC4-214ENST00000494047 ZRANB2O95218 330 aaKnown RBP eCLIP12.96□□□□□ -0.33
RFC4-214ENST00000494047 BMP6P22004 513 aa12.96□□□□□ -0.33
RFC4-214ENST00000494047 PBX1P40424 430 aa12.96□□□□□ -0.33
RFC4-214ENST00000494047 BCAMP50895 628 aa12.96□□□□□ -0.33
RFC4-214ENST00000494047 CLCN6P51797 869 aa12.96□□□□□ -0.33
RFC4-214ENST00000494047 ERCC6LQ2NKX8 1250 aa12.96□□□□□ -0.33
RFC4-214ENST00000494047 CRY2Q49AN0 593 aa12.96□□□□□ -0.33
RFC4-214ENST00000494047 IQCEQ6IPM2 695 aa12.96□□□□□ -0.33
RFC4-214ENST00000494047 CCDC24Q8N4L8 307 aa12.96□□□□□ -0.33
RFC4-214ENST00000494047 DPF2Q92785 391 aa12.96□□□□□ -0.33
RFC4-214ENST00000494047 SYMPKQ92797 1274 aaKnown RBP12.96□□□□□ -0.33
RFC4-214ENST00000494047 TNFRSF25Q93038 417 aa12.96□□□□□ -0.33
RFC4-214ENST00000494047 DHX58Q96C10 678 aa12.96□□□□□ -0.33
RFC4-214ENST00000494047 NUP58Q9BVL2 599 aa12.96□□□□□ -0.33
RFC4-214ENST00000494047 SENP2Q9HC62 589 aa12.96□□□□□ -0.33
RFC4-214ENST00000494047 ABCF2Q9UG63 623 aa12.96□□□□□ -0.33
RFC4-214ENST00000494047 COL11A2P13942 1736 aaPredicted RBP12.96□□□□□ -0.33
RFC4-214ENST00000494047 TNRC6CQ9HCJ0 1690 aaKnown RBP12.96□□□□□ -0.33
RFC4-214ENST00000494047 A0A087WWV3 80 aa12.95□□□□□ -0.34
RFC4-214ENST00000494047 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.95□□□□□ -0.34
RFC4-214ENST00000494047 BICDL2A1A5D9 508 aa12.95□□□□□ -0.34
RFC4-214ENST00000494047 CTAGE9A4FU28 777 aa12.95□□□□□ -0.34
RFC4-214ENST00000494047 SMARCA1P28370 1054 aa12.95□□□□□ -0.34
RFC4-214ENST00000494047 GUCY1A2P33402 732 aa12.95□□□□□ -0.34
RFC4-214ENST00000494047 NR5A1Q13285 461 aa12.95□□□□□ -0.34
RFC4-214ENST00000494047 PKN1Q16512 942 aa12.95□□□□□ -0.34
RFC4-214ENST00000494047 GRIPAP1Q4V328 841 aa12.95□□□□□ -0.34
RFC4-214ENST00000494047 RSRC2Q7L4I2 434 aaKnown RBP12.95□□□□□ -0.34
RFC4-214ENST00000494047 SRGAP1Q7Z6B7 1085 aa12.95□□□□□ -0.34
RFC4-214ENST00000494047 SYNE4Q8N205 404 aa12.95□□□□□ -0.34
RFC4-214ENST00000494047 RUBCNQ92622 972 aa12.95□□□□□ -0.34
RFC4-214ENST00000494047 NLRP3Q96P20 1036 aa12.95□□□□□ -0.34
RFC4-214ENST00000494047 ARID3AQ99856 593 aa12.95□□□□□ -0.34
RFC4-214ENST00000494047 GPBP1L1Q9HC44 474 aaPredicted RBP12.95□□□□□ -0.34
RFC4-214ENST00000494047 TCP11L1Q9NUJ3 509 aa12.95□□□□□ -0.34
RFC4-214ENST00000494047 INTS13Q9NVM9 706 aa12.95□□□□□ -0.34
RFC4-214ENST00000494047 LTBP3Q9NS15 1303 aa12.95□□□□□ -0.34
RFC4-214ENST00000494047 IPO7O95373 1038 aaKnown RBP12.94□□□□□ -0.34
RFC4-214ENST00000494047 PNMA6AP0CW24 399 aaPredicted RBP12.94□□□□□ -0.34
RFC4-214ENST00000494047 LMNB1P20700 586 aa12.94□□□□□ -0.34
RFC4-214ENST00000494047 HOXA10P31260 410 aaPredicted RBP12.94□□□□□ -0.34
RFC4-214ENST00000494047 NLRP5P59047 1200 aa12.94□□□□□ -0.34
RFC4-214ENST00000494047 AMPD3Q01432 767 aa12.94□□□□□ -0.34
RFC4-214ENST00000494047 FMR1Q06787 632 aaKnown RBP eCLIP12.94□□□□□ -0.34
RFC4-214ENST00000494047 ERFEQ4G0M1 354 aa12.94□□□□□ -0.34
RFC4-214ENST00000494047 C9orf131Q5VYM1 1079 aa12.94□□□□□ -0.34
RFC4-214ENST00000494047 WWC2Q6AWC2 1192 aa12.94□□□□□ -0.34
RFC4-214ENST00000494047 CC2D2BQ6DHV5 1058 aa12.94□□□□□ -0.34
RFC4-214ENST00000494047 FOXR2Q6PJQ5 311 aa12.94□□□□□ -0.34
RFC4-214ENST00000494047 FBXO33Q7Z6M2 555 aa12.94□□□□□ -0.34
RFC4-214ENST00000494047 HELBQ8NG08 1087 aaPredicted RBP12.94□□□□□ -0.34
RFC4-214ENST00000494047 TSPYL1Q9H0U9 437 aa12.94□□□□□ -0.34
RFC4-214ENST00000494047 THAP9Q9H5L6 903 aa12.94□□□□□ -0.34
RFC4-214ENST00000494047 KAT14Q9H8E8 782 aa12.94□□□□□ -0.34
RFC4-214ENST00000494047 CDC23Q9UJX2 597 aa12.94□□□□□ -0.34
RFC4-214ENST00000494047 FER1L6Q2WGJ9 1857 aa12.94□□□□□ -0.34
RFC4-214ENST00000494047 ABCB11O95342 1321 aa12.94□□□□□ -0.34
RFC4-214ENST00000494047 SLX4Q8IY92 1834 aa12.94□□□□□ -0.34
RFC4-214ENST00000494047 PSMA7O14818 248 aa12.94□□□□□ -0.34
RFC4-214ENST00000494047 PRKAB2O43741 272 aa12.94□□□□□ -0.34
RFC4-214ENST00000494047 BAG3O95817 575 aa12.94□□□□□ -0.34
RFC4-214ENST00000494047 LDHCP07864 332 aa12.94□□□□□ -0.34
RFC4-214ENST00000494047 KRT83P78385 493 aa12.94□□□□□ -0.34
RFC4-214ENST00000494047 E2F4Q16254 413 aa12.94□□□□□ -0.34
RFC4-214ENST00000494047 MAP9Q49MG5 647 aa12.94□□□□□ -0.34
RFC4-214ENST00000494047 COBLL1Q53SF7 1204 aa12.94□□□□□ -0.34
RFC4-214ENST00000494047 ISM2Q6H9L7 571 aa12.94□□□□□ -0.34
RFC4-214ENST00000494047 MIGA1Q8NAN2 632 aa12.94□□□□□ -0.34
RFC4-214ENST00000494047 WDR66Q8TBY9 1149 aa12.94□□□□□ -0.34
RFC4-214ENST00000494047 RPGRQ92834 1020 aaKnown RBP12.94□□□□□ -0.34
RFC4-214ENST00000494047 KIFC2Q96AC6 838 aa12.94□□□□□ -0.34
RFC4-214ENST00000494047 RBM17Q96I25 401 aaKnown RBP12.94□□□□□ -0.34
RFC4-214ENST00000494047 CARD6Q9BX69 1037 aa12.94□□□□□ -0.34
RFC4-214ENST00000494047 LRRC27Q9C0I9 530 aa12.94□□□□□ -0.34
RFC4-214ENST00000494047 HAUS4Q9H6D7 363 aa12.94□□□□□ -0.34
RFC4-214ENST00000494047 VPS54Q9P1Q0 977 aa12.94□□□□□ -0.34
RFC4-214ENST00000494047 MAGEC2Q9UBF1 373 aaPredicted RBP12.94□□□□□ -0.34
RFC4-214ENST00000494047 PCDHA4Q9UN74 947 aa12.94□□□□□ -0.34
RFC4-214ENST00000494047 ADGRG1Q9Y653 693 aa12.94□□□□□ -0.34
RFC4-214ENST00000494047 BAZ2AQ9UIF9 1905 aaKnown RBP12.93□□□□□ -0.34
RFC4-214ENST00000494047 TSPY2A6NKD2 308 aa12.93□□□□□ -0.34
RFC4-214ENST00000494047 TMEM232C9JQI7 657 aa12.93□□□□□ -0.34
RFC4-214ENST00000494047 N4BP3O15049 544 aa12.93□□□□□ -0.34
RFC4-214ENST00000494047 C21orf2O43822 256 aa12.93□□□□□ -0.34
RFC4-214ENST00000494047 FGFR1OPO95684 399 aaKnown RBP12.93□□□□□ -0.34
RFC4-214ENST00000494047 PRR29P0C7W0 189 aa12.93□□□□□ -0.34
RFC4-214ENST00000494047 PLCG2P16885 1265 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms