RNA–Protein interactions for RNA: ENST00000494028.1

CLCN6-208, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 5

Gene CLCN6, Length 773 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-208ENST00000494028 SYMPKQ92797 1274 aaKnown RBP12.16□□□□□ -0.46
CLCN6-208ENST00000494028 PIGSQ96S52 555 aa12.16□□□□□ -0.46
CLCN6-208ENST00000494028 GMLQ99445 158 aa12.16□□□□□ -0.46
CLCN6-208ENST00000494028 ZMYND12Q9H0C1 365 aa12.16□□□□□ -0.46
CLCN6-208ENST00000494028 TDRD3Q9H7E2 651 aaKnown RBP12.16□□□□□ -0.46
CLCN6-208ENST00000494028 ZNF277Q9NRM2 450 aaPredicted RBP12.16□□□□□ -0.46
CLCN6-208ENST00000494028 SEC63Q9UGP8 760 aaKnown RBP12.16□□□□□ -0.46
CLCN6-208ENST00000494028 SERTAD1Q9UHV2 236 aa12.16□□□□□ -0.46
CLCN6-208ENST00000494028 ATF5Q9Y2D1 282 aaPredicted RBP12.16□□□□□ -0.46
CLCN6-208ENST00000494028 CCDC194A0A1B0GVG4 234 aa12.15□□□□□ -0.46
CLCN6-208ENST00000494028 PSMD14O00487 310 aa12.15□□□□□ -0.46
CLCN6-208ENST00000494028 MPHOSPH10O00566 681 aaKnown RBP12.15□□□□□ -0.46
CLCN6-208ENST00000494028 MSNP26038 577 aaKnown RBP12.15□□□□□ -0.46
CLCN6-208ENST00000494028 MCM7P33993 719 aa12.15□□□□□ -0.46
CLCN6-208ENST00000494028 PTGDRQ13258 359 aa12.15□□□□□ -0.46
CLCN6-208ENST00000494028 PPP4R3BQ5MIZ7 849 aa12.15□□□□□ -0.46
CLCN6-208ENST00000494028 KRT25Q7Z3Z0 450 aa12.15□□□□□ -0.46
CLCN6-208ENST00000494028 LARGE2Q8N3Y3 721 aa12.15□□□□□ -0.46
CLCN6-208ENST00000494028 CCDC12Q8WUD4 166 aaPredicted RBP12.15□□□□□ -0.46
CLCN6-208ENST00000494028 UBA5Q9GZZ9 404 aa12.15□□□□□ -0.46
CLCN6-208ENST00000494028 CLIP2Q9UDT6 1046 aa12.15□□□□□ -0.46
CLCN6-208ENST00000494028 CNTNAP1P78357 1384 aa12.15□□□□□ -0.46
CLCN6-208ENST00000494028 DOCK1Q14185 1865 aa12.14□□□□□ -0.47
CLCN6-208ENST00000494028 VWA3AA6NCI4 1184 aa12.14□□□□□ -0.47
CLCN6-208ENST00000494028 SPDYE2BA6NHP3 402 aa12.14□□□□□ -0.47
CLCN6-208ENST00000494028 POLR2DO15514 142 aaKnown RBP12.14□□□□□ -0.47
CLCN6-208ENST00000494028 VIL1P09327 827 aaKnown RBP12.14□□□□□ -0.47
CLCN6-208ENST00000494028 SPDYE6P0CI01 402 aa12.14□□□□□ -0.47
CLCN6-208ENST00000494028 MDM2Q00987 491 aaPredicted RBP12.14□□□□□ -0.47
CLCN6-208ENST00000494028 NCAPHQ15003 741 aa12.14□□□□□ -0.47
CLCN6-208ENST00000494028 IL17AQ16552 155 aa12.14□□□□□ -0.47
CLCN6-208ENST00000494028 CCDC96Q2M329 555 aa12.14□□□□□ -0.47
CLCN6-208ENST00000494028 TATDN1Q6P1N9 297 aa12.14□□□□□ -0.47
CLCN6-208ENST00000494028 SH3RF1Q7Z6J0 888 aa12.14□□□□□ -0.47
CLCN6-208ENST00000494028 GRAMD1CQ8IYS0 662 aa12.14□□□□□ -0.47
CLCN6-208ENST00000494028 C4orf32Q8N8J7 132 aa12.14□□□□□ -0.47
CLCN6-208ENST00000494028 DHX58Q96C10 678 aa12.14□□□□□ -0.47
CLCN6-208ENST00000494028 NAT10Q9H0A0 1025 aaKnown RBP12.14□□□□□ -0.47
CLCN6-208ENST00000494028 GPCPD1Q9NPB8 672 aa12.14□□□□□ -0.47
CLCN6-208ENST00000494028 PI4KBQ9UBF8 816 aa12.14□□□□□ -0.47
CLCN6-208ENST00000494028 MAN1B1Q9UKM7 699 aa12.14□□□□□ -0.47
CLCN6-208ENST00000494028 BECN2A8MW95 431 aa12.13□□□□□ -0.47
CLCN6-208ENST00000494028 ZNF500O60304 480 aaPredicted RBP12.13□□□□□ -0.47
CLCN6-208ENST00000494028 PPP1R11O60927 126 aaPredicted RBP12.13□□□□□ -0.47
CLCN6-208ENST00000494028 RAD17O75943 681 aa12.13□□□□□ -0.47
CLCN6-208ENST00000494028 ICA1Q05084 483 aa12.13□□□□□ -0.47
CLCN6-208ENST00000494028 ZRSR1Q15695 479 aaKnown RBP12.13□□□□□ -0.47
CLCN6-208ENST00000494028 E2F4Q16254 413 aa12.13□□□□□ -0.47
CLCN6-208ENST00000494028 INF2Q27J81 1249 aa12.13□□□□□ -0.47
CLCN6-208ENST00000494028 GPATCH4Q5T3I0 446 aaKnown RBP12.13□□□□□ -0.47
CLCN6-208ENST00000494028 SOGA3Q5TF21 947 aa12.13□□□□□ -0.47
CLCN6-208ENST00000494028 NT5DC1Q5TFE4 455 aa12.13□□□□□ -0.47
CLCN6-208ENST00000494028 ARL6IP4Q66PJ3 421 aaKnown RBP12.13□□□□□ -0.47
CLCN6-208ENST00000494028 TTBK2Q6IQ55 1244 aa12.13□□□□□ -0.47
CLCN6-208ENST00000494028 TMEM179Q6ZVK1 233 aa12.13□□□□□ -0.47
CLCN6-208ENST00000494028 FOXP4Q8IVH2 680 aaPredicted RBP12.13□□□□□ -0.47
CLCN6-208ENST00000494028 ZSCAN29Q8IWY8 852 aaPredicted RBP12.13□□□□□ -0.47
CLCN6-208ENST00000494028 PDILTQ8N807 584 aa12.13□□□□□ -0.47
CLCN6-208ENST00000494028 SPC24Q8NBT2 197 aa12.13□□□□□ -0.47
CLCN6-208ENST00000494028 DCAF4Q8WV16 495 aa12.13□□□□□ -0.47
CLCN6-208ENST00000494028 MTMR8Q96EF0 704 aa12.13□□□□□ -0.47
CLCN6-208ENST00000494028 EPSTI1Q96J88 318 aa12.13□□□□□ -0.47
CLCN6-208ENST00000494028 PRMT6Q96LA8 375 aaPredicted RBP12.13□□□□□ -0.47
CLCN6-208ENST00000494028 TMEM60Q9H2L4 133 aa12.13□□□□□ -0.47
CLCN6-208ENST00000494028 KCNF1Q9H3M0 494 aa12.13□□□□□ -0.47
CLCN6-208ENST00000494028 NYAP2Q9P242 653 aa12.13□□□□□ -0.47
CLCN6-208ENST00000494028 PCDHA5Q9Y5H7 936 aa12.13□□□□□ -0.47
CLCN6-208ENST00000494028 DICER1Q9UPY3 1922 aaKnown RBP12.13□□□□□ -0.47
CLCN6-208ENST00000494028 PARP14Q460N5 1801 aa12.12□□□□□ -0.47
CLCN6-208ENST00000494028 SMCO2A6NFE2 343 aa12.12□□□□□ -0.47
CLCN6-208ENST00000494028 IKBKBO14920 756 aa12.12□□□□□ -0.47
CLCN6-208ENST00000494028 GDF11O95390 407 aa12.12□□□□□ -0.47
CLCN6-208ENST00000494028 BMP6P22004 513 aa12.12□□□□□ -0.47
CLCN6-208ENST00000494028 SARSP49591 514 aaKnown RBP12.12□□□□□ -0.47
CLCN6-208ENST00000494028 ADCY7P51828 1080 aa12.12□□□□□ -0.47
CLCN6-208ENST00000494028 SEPT2Q15019 361 aa12.12□□□□□ -0.47
CLCN6-208ENST00000494028 NONOQ15233 471 aaKnown RBP eCLIP12.12□□□□□ -0.47
CLCN6-208ENST00000494028 SPDYE2Q495Y8 402 aa12.12□□□□□ -0.47
CLCN6-208ENST00000494028 CERKLQ49MI3 558 aaPredicted RBP12.12□□□□□ -0.47
CLCN6-208ENST00000494028 NIM1KQ8IY84 436 aa12.12□□□□□ -0.47
CLCN6-208ENST00000494028 SPATA20Q8TB22 786 aa12.12□□□□□ -0.47
CLCN6-208ENST00000494028 MRFAP1L1Q96HT8 127 aa12.12□□□□□ -0.47
CLCN6-208ENST00000494028 TRIM34Q9BYJ4 488 aa12.12□□□□□ -0.47
CLCN6-208ENST00000494028 TRIM5Q9C035 493 aa12.12□□□□□ -0.47
CLCN6-208ENST00000494028 VPS33BQ9H267 617 aa12.12□□□□□ -0.47
CLCN6-208ENST00000494028 TTC12Q9H892 705 aaPredicted RBP12.12□□□□□ -0.47
CLCN6-208ENST00000494028 JMJD4Q9H9V9 463 aa12.12□□□□□ -0.47
CLCN6-208ENST00000494028 C6orf50Q9HD87 102 aa12.12□□□□□ -0.47
CLCN6-208ENST00000494028 TMOD2Q9NZR1 351 aa12.12□□□□□ -0.47
CLCN6-208ENST00000494028 HOOK1Q9UJC3 728 aaKnown RBP12.12□□□□□ -0.47
CLCN6-208ENST00000494028 CLRN2A0PK11 232 aa12.11□□□□□ -0.47
CLCN6-208ENST00000494028 GOLGA6L6A8MZA4 724 aa12.11□□□□□ -0.47
CLCN6-208ENST00000494028 EEF2P13639 858 aaKnown RBP12.11□□□□□ -0.47
CLCN6-208ENST00000494028 PTGS1P23219 599 aa12.11□□□□□ -0.47
CLCN6-208ENST00000494028 GNA11P29992 359 aa12.11□□□□□ -0.47
CLCN6-208ENST00000494028 LONP1P36776 959 aaKnown RBP12.11□□□□□ -0.47
CLCN6-208ENST00000494028 PRPHP41219 470 aa12.11□□□□□ -0.47
CLCN6-208ENST00000494028 TGFB2P61812 414 aa12.11□□□□□ -0.47
CLCN6-208ENST00000494028 JAG1P78504 1218 aa12.11□□□□□ -0.47
CLCN6-208ENST00000494028 ATP2B2Q01814 1243 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms