RNA–Protein interactions for RNA: ENST00000494000.1

FNDC3B-212, Transcript of fibronectin type III domain containing 3B, humanhuman

TSL 1 (best)

Gene FNDC3B, Length 2,600 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-212ENST00000494000 GALNT17Q6IS24 598 aa7.68□□□□□ -1.18
FNDC3B-212ENST00000494000 RCSD1Q6JBY9 416 aa7.68□□□□□ -1.18
FNDC3B-212ENST00000494000 STK11IPQ8N1F8 1099 aa7.68□□□□□ -1.18
FNDC3B-212ENST00000494000 ZNF713Q8N859 430 aaPredicted RBP7.68□□□□□ -1.18
FNDC3B-212ENST00000494000 MXD3Q9BW11 206 aa7.68□□□□□ -1.18
FNDC3B-212ENST00000494000 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.68□□□□□ -1.18
FNDC3B-212ENST00000494000 KCNQ5Q9NR82 932 aa7.68□□□□□ -1.18
FNDC3B-212ENST00000494000 GINM1Q9NU53 330 aa7.68□□□□□ -1.18
FNDC3B-212ENST00000494000 COMMD10Q9Y6G5 202 aa7.68□□□□□ -1.18
FNDC3B-212ENST00000494000 IGKV6D-41A0A0C4DH26 115 aa7.68□□□□□ -1.18
FNDC3B-212ENST00000494000 TBC1D12O60347 775 aa7.68□□□□□ -1.18
FNDC3B-212ENST00000494000 TTLL1O95922 423 aa7.68□□□□□ -1.18
FNDC3B-212ENST00000494000 NAT1P18440 290 aa7.68□□□□□ -1.18
FNDC3B-212ENST00000494000 ZNF280AP59817 542 aaPredicted RBP7.68□□□□□ -1.18
FNDC3B-212ENST00000494000 CXCL9Q07325 125 aa7.68□□□□□ -1.18
FNDC3B-212ENST00000494000 SPDYE2Q495Y8 402 aa7.68□□□□□ -1.18
FNDC3B-212ENST00000494000 ASPRV1Q53RT3 343 aa7.68□□□□□ -1.18
FNDC3B-212ENST00000494000 ADAMTS19Q8TE59 1207 aa7.68□□□□□ -1.18
FNDC3B-212ENST00000494000 HOOK2Q96ED9 719 aa7.68□□□□□ -1.18
FNDC3B-212ENST00000494000 FOXP1Q9H334 677 aaPredicted RBP7.68□□□□□ -1.18
FNDC3B-212ENST00000494000 SENP2Q9HC62 589 aa7.68□□□□□ -1.18
FNDC3B-212ENST00000494000 DDX4Q9NQI0 724 aaKnown RBP7.68□□□□□ -1.18
FNDC3B-212ENST00000494000 IL17RBQ9NRM6 502 aa7.68□□□□□ -1.18
FNDC3B-212ENST00000494000 GOLGA6L4A6NEF3 574 aa7.67□□□□□ -1.18
FNDC3B-212ENST00000494000 FZD9O00144 591 aa7.67□□□□□ -1.18
FNDC3B-212ENST00000494000 NFKBIEO00221 500 aa7.67□□□□□ -1.18
FNDC3B-212ENST00000494000 RAD17O75943 681 aa7.67□□□□□ -1.18
FNDC3B-212ENST00000494000 YEATS4O95619 227 aa7.67□□□□□ -1.18
FNDC3B-212ENST00000494000 CALML3P27482 149 aa7.67□□□□□ -1.18
FNDC3B-212ENST00000494000 GNL2Q13823 731 aaKnown RBP7.67□□□□□ -1.18
FNDC3B-212ENST00000494000 BMS1Q14692 1282 aaKnown RBP7.67□□□□□ -1.18
FNDC3B-212ENST00000494000 TSNAXIP1Q2TAA8 658 aa7.67□□□□□ -1.18
FNDC3B-212ENST00000494000 TATDN1Q6P1N9 297 aa7.67□□□□□ -1.18
FNDC3B-212ENST00000494000 USP48Q86UV5 1035 aa7.67□□□□□ -1.18
FNDC3B-212ENST00000494000 CCDC12Q8WUD4 166 aaPredicted RBP7.67□□□□□ -1.18
FNDC3B-212ENST00000494000 GLMNQ92990 594 aa7.67□□□□□ -1.18
FNDC3B-212ENST00000494000 ZBED3Q96IU2 234 aaPredicted RBP7.67□□□□□ -1.18
FNDC3B-212ENST00000494000 SPZ1Q9BXG8 430 aa7.67□□□□□ -1.18
FNDC3B-212ENST00000494000 MUC3BQ9H195 1237 aa7.67□□□□□ -1.18
FNDC3B-212ENST00000494000 KANSL2Q9H9L4 492 aa7.67□□□□□ -1.18
FNDC3B-212ENST00000494000 MTMR4Q9NYA4 1195 aa7.67□□□□□ -1.18
FNDC3B-212ENST00000494000 NYAP2Q9P242 653 aa7.67□□□□□ -1.18
FNDC3B-212ENST00000494000 FAM198AQ9UFP1 575 aa7.67□□□□□ -1.18
FNDC3B-212ENST00000494000 MORC2Q9Y6X9 1032 aaPredicted RBP7.67□□□□□ -1.18
FNDC3B-212ENST00000494000 MYH6P13533 1939 aa7.67□□□□□ -1.18
FNDC3B-212ENST00000494000 GREB1LQ9C091 1923 aaPredicted RBP7.67□□□□□ -1.18
FNDC3B-212ENST00000494000 DICER1Q9UPY3 1922 aaKnown RBP7.67□□□□□ -1.18
FNDC3B-212ENST00000494000 PARP1P09874 1014 aaKnown RBP7.67□□□□□ -1.18
FNDC3B-212ENST00000494000 U2AF2P26368 475 aaKnown RBP eCLIP7.67□□□□□ -1.186e-9■□□□□ 8.2
FNDC3B-212ENST00000494000 DNM1Q05193 864 aaKnown RBP7.67□□□□□ -1.18
FNDC3B-212ENST00000494000 KRT40Q6A162 431 aa7.67□□□□□ -1.18
FNDC3B-212ENST00000494000 TMEM179Q6ZVK1 233 aa7.67□□□□□ -1.18
FNDC3B-212ENST00000494000 ANKRD23Q86SG2 305 aa7.67□□□□□ -1.18
FNDC3B-212ENST00000494000 ZSCAN29Q8IWY8 852 aaPredicted RBP7.67□□□□□ -1.18
FNDC3B-212ENST00000494000 MSL3Q8N5Y2 521 aaKnown RBP7.67□□□□□ -1.18
FNDC3B-212ENST00000494000 JMYQ8N9B5 988 aa7.67□□□□□ -1.18
FNDC3B-212ENST00000494000 CCDC148Q8NFR7 591 aa7.67□□□□□ -1.18
FNDC3B-212ENST00000494000 NKX2-3Q8TAU0 364 aa7.67□□□□□ -1.18
FNDC3B-212ENST00000494000 MKL1Q969V6 931 aa7.67□□□□□ -1.18
FNDC3B-212ENST00000494000 TMEM47Q9BQJ4 181 aa7.67□□□□□ -1.18
FNDC3B-212ENST00000494000 INO80BQ9C086 356 aaPredicted RBP7.67□□□□□ -1.18
FNDC3B-212ENST00000494000 CABP5Q9NP86 173 aa7.67□□□□□ -1.18
FNDC3B-212ENST00000494000 ZNF70Q9UC06 446 aaPredicted RBP7.67□□□□□ -1.18
FNDC3B-212ENST00000494000 RCOR1Q9UKL0 485 aa7.67□□□□□ -1.18
FNDC3B-212ENST00000494000 STX8Q9UNK0 236 aa7.67□□□□□ -1.18
FNDC3B-212ENST00000494000 MRPL42Q9Y6G3 142 aaKnown RBP7.67□□□□□ -1.18
FNDC3B-212ENST00000494000 ADAMTSL1Q8N6G6 1762 aa7.67□□□□□ -1.18
FNDC3B-212ENST00000494000 PSDA5PKW4 1024 aaPredicted RBP7.66□□□□□ -1.18
FNDC3B-212ENST00000494000 PALM3A6NDB9 673 aaPredicted RBP7.66□□□□□ -1.18
FNDC3B-212ENST00000494000 BMP15O95972 392 aa7.66□□□□□ -1.18
FNDC3B-212ENST00000494000 MMP1P03956 469 aa7.66□□□□□ -1.18
FNDC3B-212ENST00000494000 SHMT1P34896 483 aa7.66□□□□□ -1.18
FNDC3B-212ENST00000494000 KIF23Q02241 960 aaPredicted RBP7.66□□□□□ -1.18
FNDC3B-212ENST00000494000 FUT2Q10981 343 aa7.66□□□□□ -1.18
FNDC3B-212ENST00000494000 CERKLQ49MI3 558 aaPredicted RBP7.66□□□□□ -1.18
FNDC3B-212ENST00000494000 GPATCH4Q5T3I0 446 aaKnown RBP7.66□□□□□ -1.18
FNDC3B-212ENST00000494000 TTC39BQ5VTQ0 682 aaPredicted RBP7.66□□□□□ -1.18
FNDC3B-212ENST00000494000 KCNG4Q8TDN1 519 aa7.66□□□□□ -1.18
FNDC3B-212ENST00000494000 PRMT6Q96LA8 375 aaPredicted RBP7.66□□□□□ -1.18
FNDC3B-212ENST00000494000 MYL10Q9BUA6 226 aa7.66□□□□□ -1.18
FNDC3B-212ENST00000494000 TDRD3Q9H7E2 651 aaKnown RBP7.66□□□□□ -1.18
FNDC3B-212ENST00000494000 POLR3EQ9NVU0 708 aa7.66□□□□□ -1.18
FNDC3B-212ENST00000494000 RTEL1Q9NZ71 1219 aa7.66□□□□□ -1.18
FNDC3B-212ENST00000494000 CEP131Q9UPN4 1083 aa7.66□□□□□ -1.18
FNDC3B-212ENST00000494000 CNPY2Q9Y2B0 182 aa7.66□□□□□ -1.18
FNDC3B-212ENST00000494000 CNTNAP5Q8WYK1 1306 aa7.66□□□□□ -1.18
FNDC3B-212ENST00000494000 IGBP1P78318 339 aa7.66□□□□□ -1.18
FNDC3B-212ENST00000494000 MTA1Q13330 715 aa7.66□□□□□ -1.18
FNDC3B-212ENST00000494000 PLEKHG6Q3KR16 790 aa7.66□□□□□ -1.18
FNDC3B-212ENST00000494000 C10orf62Q5T681 223 aaPredicted RBP7.66□□□□□ -1.18
FNDC3B-212ENST00000494000 L1TD1Q5T7N2 865 aaKnown RBP7.66□□□□□ -1.18
FNDC3B-212ENST00000494000 CCDC144CPQ8IYA2 1237 aa7.66□□□□□ -1.18
FNDC3B-212ENST00000494000 PHKBQ93100 1093 aa7.66□□□□□ -1.18
FNDC3B-212ENST00000494000 COL4A5P29400 1685 aa7.66□□□□□ -1.18
FNDC3B-212ENST00000494000 C7P10643 843 aa7.65□□□□□ -1.18
FNDC3B-212ENST00000494000 SCG2P13521 617 aa7.65□□□□□ -1.18
FNDC3B-212ENST00000494000 RXRAP19793 462 aa7.65□□□□□ -1.18
FNDC3B-212ENST00000494000 NFIAQ12857 509 aa7.65□□□□□ -1.18
FNDC3B-212ENST00000494000 TRAF1Q13077 416 aa7.65□□□□□ -1.18
FNDC3B-212ENST00000494000 ENOX2Q16206 610 aaKnown RBP7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms