RNA–Protein interactions for RNA: ENST00000493923.1

HDAC6-234, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 404 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-234ENST00000493923 MCM4P33991 863 aa9.67□□□□□ -0.86
HDAC6-234ENST00000493923 LRRC26Q2I0M4 334 aa9.67□□□□□ -0.86
HDAC6-234ENST00000493923 SBK1Q52WX2 424 aa9.67□□□□□ -0.86
HDAC6-234ENST00000493923 FAM83BQ5T0W9 1011 aa9.67□□□□□ -0.86
HDAC6-234ENST00000493923 ANO1Q5XXA6 986 aa9.67□□□□□ -0.86
HDAC6-234ENST00000493923 NECAB2Q7Z6G3 386 aa9.67□□□□□ -0.86
HDAC6-234ENST00000493923 ZSCAN30Q86W11 494 aa9.67□□□□□ -0.86
HDAC6-234ENST00000493923 CCAR1Q8IX12 1150 aaKnown RBP9.67□□□□□ -0.86
HDAC6-234ENST00000493923 BBXQ8WY36 941 aaPredicted RBP9.67□□□□□ -0.86
HDAC6-234ENST00000493923 APPBP2Q92624 585 aa9.67□□□□□ -0.86
HDAC6-234ENST00000493923 PLXNA1Q9UIW2 1896 aa9.67□□□□□ -0.86
HDAC6-234ENST00000493923 MCM3APO60318 1980 aa9.66□□□□□ -0.86
HDAC6-234ENST00000493923 ROBO3Q96MS0 1386 aa9.66□□□□□ -0.86
HDAC6-234ENST00000493923 GALR2O43603 387 aaPredicted RBP9.66□□□□□ -0.86
HDAC6-234ENST00000493923 CYBAP13498 195 aa9.66□□□□□ -0.86
HDAC6-234ENST00000493923 MCM5P33992 734 aa9.66□□□□□ -0.86
HDAC6-234ENST00000493923 SLC4A3P48751 1232 aa9.66□□□□□ -0.86
HDAC6-234ENST00000493923 CCNA1P78396 465 aa9.66□□□□□ -0.86
HDAC6-234ENST00000493923 PLS1Q14651 629 aa9.66□□□□□ -0.86
HDAC6-234ENST00000493923 ZSCAN25Q6NSZ9 544 aa9.66□□□□□ -0.86
HDAC6-234ENST00000493923 RASGRP2Q7LDG7 609 aa9.66□□□□□ -0.86
HDAC6-234ENST00000493923 ANKLE1Q8NAG6 615 aa9.66□□□□□ -0.86
HDAC6-234ENST00000493923 CHMP4CQ96CF2 233 aa9.66□□□□□ -0.86
HDAC6-234ENST00000493923 CCDC17Q96LX7 622 aa9.66□□□□□ -0.86
HDAC6-234ENST00000493923 NBPF3Q9H094 633 aa9.66□□□□□ -0.86
HDAC6-234ENST00000493923 C11orf49Q9H6J7 331 aa9.66□□□□□ -0.86
HDAC6-234ENST00000493923 ARHGEF10LQ9HCE6 1279 aa9.66□□□□□ -0.86
HDAC6-234ENST00000493923 CWC22Q9HCG8 908 aaKnown RBP9.66□□□□□ -0.86
HDAC6-234ENST00000493923 HOXC10Q9NYD6 342 aa9.66□□□□□ -0.86
HDAC6-234ENST00000493923 CHMP5Q9NZZ3 219 aa9.66□□□□□ -0.86
HDAC6-234ENST00000493923 NAP1L2Q9ULW6 460 aaPredicted RBP9.66□□□□□ -0.86
HDAC6-234ENST00000493923 ADAMTS5Q9UNA0 930 aa9.66□□□□□ -0.86
HDAC6-234ENST00000493923 NR2E3Q9Y5X4 410 aa9.66□□□□□ -0.86
HDAC6-234ENST00000493923 WDR46O15213 610 aaKnown RBP9.65□□□□□ -0.86
HDAC6-234ENST00000493923 RAD21O60216 631 aa9.65□□□□□ -0.86
HDAC6-234ENST00000493923 NDUFB10O96000 172 aa9.65□□□□□ -0.86
HDAC6-234ENST00000493923 PGK2P07205 417 aa9.65□□□□□ -0.86
HDAC6-234ENST00000493923 TAL1P17542 331 aaPredicted RBP9.65□□□□□ -0.86
HDAC6-234ENST00000493923 ZMYM1Q5SVZ6 1142 aa9.65□□□□□ -0.86
HDAC6-234ENST00000493923 VPS53Q5VIR6 699 aa9.65□□□□□ -0.86
HDAC6-234ENST00000493923 NCAPG2Q86XI2 1143 aa9.65□□□□□ -0.86
HDAC6-234ENST00000493923 TRMT44Q8IYL2 757 aaKnown RBP9.65□□□□□ -0.86
HDAC6-234ENST00000493923 IFNL3Q8IZI9 196 aa9.65□□□□□ -0.86
HDAC6-234ENST00000493923 SHCBP1Q8NEM2 672 aa9.65□□□□□ -0.86
HDAC6-234ENST00000493923 LRCH3Q96II8 777 aa9.65□□□□□ -0.86
HDAC6-234ENST00000493923 GDF15Q99988 308 aa9.65□□□□□ -0.86
HDAC6-234ENST00000493923 ARPP21Q9UBL0 812 aaPredicted RBP9.65□□□□□ -0.86
HDAC6-234ENST00000493923 ZNF214Q9UL59 606 aaPredicted RBP9.65□□□□□ -0.86
HDAC6-234ENST00000493923 PPP1R9AQ9ULJ8 1098 aa9.65□□□□□ -0.86
HDAC6-234ENST00000493923 RIPK3Q9Y572 518 aa9.65□□□□□ -0.86
HDAC6-234ENST00000493923 COL6A3P12111 3177 aa9.65□□□□□ -0.86
HDAC6-234ENST00000493923 VWA5AO00534 786 aa9.64□□□□□ -0.87
HDAC6-234ENST00000493923 CNGA1P29973 690 aa9.64□□□□□ -0.87
HDAC6-234ENST00000493923 MAGEA10P43363 369 aaPredicted RBP9.64□□□□□ -0.87
HDAC6-234ENST00000493923 FAM47AQ5JRC9 791 aa9.64□□□□□ -0.87
HDAC6-234ENST00000493923 ANKRD45Q5TZF3 282 aa9.64□□□□□ -0.87
HDAC6-234ENST00000493923 MFSD14CQ5VZR4 134 aa9.64□□□□□ -0.87
HDAC6-234ENST00000493923 GIMAP6Q6P9H5 292 aa9.64□□□□□ -0.87
HDAC6-234ENST00000493923 LRRC47Q8N1G4 583 aaKnown RBP9.64□□□□□ -0.87
HDAC6-234ENST00000493923 LPAR1Q92633 364 aa9.64□□□□□ -0.87
HDAC6-234ENST00000493923 LENG1Q96BZ8 264 aaPredicted RBP9.64□□□□□ -0.87
HDAC6-234ENST00000493923 CEP95Q96GE4 821 aa9.64□□□□□ -0.87
HDAC6-234ENST00000493923 PHF12Q96QT6 1004 aa9.64□□□□□ -0.87
HDAC6-234ENST00000493923 PPP1R9BQ96SB3 815 aa9.64□□□□□ -0.87
HDAC6-234ENST00000493923 CCDC94Q9BW85 323 aaPredicted RBP9.64□□□□□ -0.87
HDAC6-234ENST00000493923 KANSL2Q9H9L4 492 aa9.64□□□□□ -0.87
HDAC6-234ENST00000493923 CLIP2Q9UDT6 1046 aa9.64□□□□□ -0.87
HDAC6-234ENST00000493923 DDX20Q9UHI6 824 aaKnown RBP9.64□□□□□ -0.87
HDAC6-234ENST00000493923 IVNS1ABPQ9Y6Y0 642 aa9.64□□□□□ -0.87
HDAC6-234ENST00000493923 TTC41PQ6P2S7 1318 aa9.63□□□□□ -0.87
HDAC6-234ENST00000493923 PATL2C9JE40 543 aaKnown RBP9.63□□□□□ -0.87
HDAC6-234ENST00000493923 F5H6K3 240 aa9.63□□□□□ -0.87
HDAC6-234ENST00000493923 TRAK2O60296 914 aa9.63□□□□□ -0.87
HDAC6-234ENST00000493923 GLRX3O76003 335 aaKnown RBP9.63□□□□□ -0.87
HDAC6-234ENST00000493923 MX1P20591 662 aa9.63□□□□□ -0.87
HDAC6-234ENST00000493923 TDO2P48775 406 aa9.63□□□□□ -0.87
HDAC6-234ENST00000493923 ATN1P54259 1190 aaPredicted RBP9.63□□□□□ -0.87
HDAC6-234ENST00000493923 IRX5P78411 483 aaPredicted RBP9.63□□□□□ -0.87
HDAC6-234ENST00000493923 CTDSPL2Q05D32 466 aa9.63□□□□□ -0.87
HDAC6-234ENST00000493923 KLRC3Q07444 240 aa9.63□□□□□ -0.87
HDAC6-234ENST00000493923 GJC2Q5T442 439 aaPredicted RBP9.63□□□□□ -0.87
HDAC6-234ENST00000493923 OLFML2BQ68BL8 750 aa9.63□□□□□ -0.87
HDAC6-234ENST00000493923 DPP9Q86TI2 863 aa9.63□□□□□ -0.87
HDAC6-234ENST00000493923 RIOX2Q8IUF8 465 aa9.63□□□□□ -0.87
HDAC6-234ENST00000493923 MB21D1Q8N884 522 aa9.63□□□□□ -0.87
HDAC6-234ENST00000493923 GPATCH3Q96I76 525 aa9.63□□□□□ -0.87
HDAC6-234ENST00000493923 MAML3Q96JK9 1138 aa9.63□□□□□ -0.87
HDAC6-234ENST00000493923 FGD4Q96M96 766 aa9.63□□□□□ -0.87
HDAC6-234ENST00000493923 FSD1Q9BTV5 496 aa9.63□□□□□ -0.87
HDAC6-234ENST00000493923 MKNK2Q9HBH9 465 aa9.63□□□□□ -0.87
HDAC6-234ENST00000493923 NYAP2Q9P242 653 aa9.63□□□□□ -0.87
HDAC6-234ENST00000493923 A0A0D9SFI3 127 aa9.62□□□□□ -0.87
HDAC6-234ENST00000493923 NMT2O60551 498 aa9.62□□□□□ -0.87
HDAC6-234ENST00000493923 APPP05067 770 aa9.62□□□□□ -0.87
HDAC6-234ENST00000493923 ZFYP08048 801 aaPredicted RBP9.62□□□□□ -0.87
HDAC6-234ENST00000493923 STAT3P40763 770 aa9.62□□□□□ -0.87
HDAC6-234ENST00000493923 PDE1AP54750 535 aa9.62□□□□□ -0.87
HDAC6-234ENST00000493923 PPARAQ07869 468 aa9.62□□□□□ -0.87
HDAC6-234ENST00000493923 ZNF792Q3KQV3 632 aa9.62□□□□□ -0.87
HDAC6-234ENST00000493923 AMOTL1Q8IY63 956 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms