RNA–Protein interactions for RNA: ENST00000493886.5

VCP-207, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 2,942 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-207ENST00000493886 DHX58Q96C10 678 aa15.65■□□□□ 0.1
VCP-207ENST00000493886 HSD3B7Q9H2F3 369 aa15.65■□□□□ 0.1
VCP-207ENST00000493886 PAXBP1Q9Y5B6 917 aa15.65■□□□□ 0.1
VCP-207ENST00000493886 VWA3AA6NCI4 1184 aa15.64■□□□□ 0.09
VCP-207ENST00000493886 KLRF2D3W0D1 207 aa15.64■□□□□ 0.09
VCP-207ENST00000493886 G3V3G9 751 aa15.64■□□□□ 0.09
VCP-207ENST00000493886 TOP1P11387 765 aaKnown RBP15.64■□□□□ 0.09
VCP-207ENST00000493886 GOLGA8FQ08AF8 430 aa15.64■□□□□ 0.09
VCP-207ENST00000493886 GOLGA8DPQ0D2H9 430 aa15.64■□□□□ 0.09
VCP-207ENST00000493886 DCAF8Q5TAQ9 597 aa15.64■□□□□ 0.09
VCP-207ENST00000493886 RASGRP2Q7LDG7 609 aa15.64■□□□□ 0.09
VCP-207ENST00000493886 CCDC148Q8NFR7 591 aa15.64■□□□□ 0.09
VCP-207ENST00000493886 QSER1Q2KHR3 1735 aa15.64■□□□□ 0.09
VCP-207ENST00000493886 PARP1P09874 1014 aaKnown RBP15.64■□□□□ 0.09
VCP-207ENST00000493886 MCM7P33993 719 aa15.64■□□□□ 0.09
VCP-207ENST00000493886 HEATR3Q7Z4Q2 680 aa15.64■□□□□ 0.09
VCP-207ENST00000493886 SPZ1Q9BXG8 430 aa15.64■□□□□ 0.09
VCP-207ENST00000493886 GTPBP4Q9BZE4 634 aaKnown RBP15.64■□□□□ 0.09
VCP-207ENST00000493886 SCNN1DP51172 638 aa15.64■□□□□ 0.09
VCP-207ENST00000493886 ARMCX5Q6P1M9 558 aa15.64■□□□□ 0.09
VCP-207ENST00000493886 NYAP1Q6ZVC0 841 aa15.64■□□□□ 0.09
VCP-207ENST00000493886 RASGRP4Q8TDF6 673 aa15.64■□□□□ 0.09
VCP-207ENST00000493886 CCDC34Q96HJ3 373 aa15.64■□□□□ 0.09
VCP-207ENST00000493886 PLCD4Q9BRC7 762 aa15.64■□□□□ 0.09
VCP-207ENST00000493886 DDX4Q9NQI0 724 aaKnown RBP15.64■□□□□ 0.09
VCP-207ENST00000493886 BARHL2Q9NY43 387 aa15.64■□□□□ 0.09
VCP-207ENST00000493886 M0R2N6 131 aa15.63■□□□□ 0.09
VCP-207ENST00000493886 STXBP3O00186 592 aa15.63■□□□□ 0.09
VCP-207ENST00000493886 NEMFO60524 1076 aa15.63■□□□□ 0.09
VCP-207ENST00000493886 NOVP48745 357 aa15.63■□□□□ 0.09
VCP-207ENST00000493886 FANCCQ00597 558 aa15.63■□□□□ 0.09
VCP-207ENST00000493886 GABPAQ06546 454 aa15.63■□□□□ 0.09
VCP-207ENST00000493886 DAGLBQ8NCG7 672 aa15.63■□□□□ 0.09
VCP-207ENST00000493886 USP40Q9NVE5 1235 aa15.63■□□□□ 0.09
VCP-207ENST00000493886 SLFN14P0C7P3 912 aa15.63■□□□□ 0.09
VCP-207ENST00000493886 MORC3Q14149 939 aa15.63■□□□□ 0.09
VCP-207ENST00000493886 GALNT17Q6IS24 598 aa15.63■□□□□ 0.09
VCP-207ENST00000493886 USP17L2Q6R6M4 530 aa15.63■□□□□ 0.09
VCP-207ENST00000493886 TRIML1Q8N9V2 468 aa15.63■□□□□ 0.09
VCP-207ENST00000493886 SPATA20Q8TB22 786 aa15.63■□□□□ 0.09
VCP-207ENST00000493886 CPVLQ9H3G5 476 aa15.63■□□□□ 0.09
VCP-207ENST00000493886 CCDC194A0A1B0GVG4 234 aa15.62■□□□□ 0.09
VCP-207ENST00000493886 ELF2Q15723 593 aa15.62■□□□□ 0.09
VCP-207ENST00000493886 SFPQP23246 707 aaKnown RBP eCLIP15.62■□□□□ 0.09
VCP-207ENST00000493886 C2CD5Q86YS7 1000 aa15.62■□□□□ 0.09
VCP-207ENST00000493886 MLKLQ8NB16 471 aa15.62■□□□□ 0.09
VCP-207ENST00000493886 IMPACTQ9P2X3 320 aa15.62■□□□□ 0.09
VCP-207ENST00000493886 PCDHA6Q9UN73 950 aa15.62■□□□□ 0.09
VCP-207ENST00000493886 PCDHA8Q9Y5H6 950 aa15.62■□□□□ 0.09
VCP-207ENST00000493886 PLIN4Q96Q06 1357 aa15.62■□□□□ 0.09
VCP-207ENST00000493886 E4F1Q66K89 784 aaPredicted RBP15.61■□□□□ 0.09
VCP-207ENST00000493886 HHIPL2Q6UWX4 724 aa15.61■□□□□ 0.09
VCP-207ENST00000493886 SH3RF1Q7Z6J0 888 aa15.61■□□□□ 0.09
VCP-207ENST00000493886 FAM177A1Q8N128 213 aaPredicted RBP15.61■□□□□ 0.09
VCP-207ENST00000493886 TEKT1Q969V4 418 aa15.61■□□□□ 0.09
VCP-207ENST00000493886 PAGE5Q96GU1 130 aa15.61■□□□□ 0.09
VCP-207ENST00000493886 OSBPL5Q9H0X9 879 aaPredicted RBP15.61■□□□□ 0.09
VCP-207ENST00000493886 DBNDD1Q9H9R9 158 aa15.61■□□□□ 0.09
VCP-207ENST00000493886 AFMP43652 599 aa15.61■□□□□ 0.09
VCP-207ENST00000493886 GSDMDP57764 484 aa15.61■□□□□ 0.09
VCP-207ENST00000493886 IL17AQ16552 155 aa15.61■□□□□ 0.09
VCP-207ENST00000493886 ARL6IP4Q66PJ3 421 aaKnown RBP15.61■□□□□ 0.09
VCP-207ENST00000493886 CDC42EP5Q6NZY7 148 aa15.61■□□□□ 0.09
VCP-207ENST00000493886 PODNQ7Z5L7 613 aa15.61■□□□□ 0.09
VCP-207ENST00000493886 DPF2Q92785 391 aa15.61■□□□□ 0.09
VCP-207ENST00000493886 MTMR4Q9NYA4 1195 aa15.61■□□□□ 0.09
VCP-207ENST00000493886 DACH1Q9UI36 760 aa15.61■□□□□ 0.09
VCP-207ENST00000493886 AKR1B1P15121 316 aa15.61■□□□□ 0.09
VCP-207ENST00000493886 SMARCA1P28370 1054 aa15.61■□□□□ 0.09
VCP-207ENST00000493886 RXRBP28702 533 aa15.61■□□□□ 0.09
VCP-207ENST00000493886 SYT10Q6XYQ8 523 aa15.61■□□□□ 0.09
VCP-207ENST00000493886 C4orf32Q8N8J7 132 aa15.61■□□□□ 0.09
VCP-207ENST00000493886 LRRN4CLQ8ND94 238 aa15.61■□□□□ 0.09
VCP-207ENST00000493886 FANCLQ9NW38 375 aa15.61■□□□□ 0.09
VCP-207ENST00000493886 MYO1BO43795 1136 aa15.6■□□□□ 0.09
VCP-207ENST00000493886 TAF3Q5VWG9 929 aa15.6■□□□□ 0.09
VCP-207ENST00000493886 APOBEC3HQ6NTF7 200 aaKnown RBP15.6■□□□□ 0.09
VCP-207ENST00000493886 HOMER1Q86YM7 354 aa15.6■□□□□ 0.09
VCP-207ENST00000493886 RRP36Q96EU6 259 aaKnown RBP15.6■□□□□ 0.09
VCP-207ENST00000493886 SERPINB13Q9UIV8 391 aa15.6■□□□□ 0.09
VCP-207ENST00000493886 ADAMTSL1Q8N6G6 1762 aa15.6■□□□□ 0.09
VCP-207ENST00000493886 USP17L5A8MUK1 530 aa15.6■□□□□ 0.09
VCP-207ENST00000493886 H0YIN7 160 aa15.6■□□□□ 0.09
VCP-207ENST00000493886 NAPAP54920 295 aa15.6■□□□□ 0.09
VCP-207ENST00000493886 KIF18AQ8NI77 898 aa15.6■□□□□ 0.09
VCP-207ENST00000493886 ZMYND12Q9H0C1 365 aa15.6■□□□□ 0.09
VCP-207ENST00000493886 KCNQ5Q9NR82 932 aa15.6■□□□□ 0.09
VCP-207ENST00000493886 SERPINC1P01008 464 aa15.59■□□□□ 0.09
VCP-207ENST00000493886 UBASH3AP57075 661 aa15.59■□□□□ 0.09
VCP-207ENST00000493886 INF2Q27J81 1249 aa15.59■□□□□ 0.09
VCP-207ENST00000493886 STYK1Q6J9G0 422 aa15.59■□□□□ 0.09
VCP-207ENST00000493886 CCDC12Q8WUD4 166 aaPredicted RBP15.59■□□□□ 0.09
VCP-207ENST00000493886 PPP1R13BQ96KQ4 1090 aa15.59■□□□□ 0.09
VCP-207ENST00000493886 SWAP70Q9UH65 585 aa15.59■□□□□ 0.09
VCP-207ENST00000493886 MYH8P13535 1937 aa15.59■□□□□ 0.09
VCP-207ENST00000493886 IGKV6D-41A0A0C4DH26 115 aa15.59■□□□□ 0.09
VCP-207ENST00000493886 CBFA2T2O43439 604 aa15.59■□□□□ 0.09
VCP-207ENST00000493886 PDHBP11177 359 aa15.59■□□□□ 0.09
VCP-207ENST00000493886 CRKP46108 304 aa15.59■□□□□ 0.09
VCP-207ENST00000493886 FMR1Q06787 632 aaKnown RBP eCLIP15.59■□□□□ 0.099e-7■■■■□ 19.5
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms