RNA–Protein interactions for RNA: ENST00000493727.5

UPF3A-210, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 937 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-210ENST00000493727 TEX11Q8IYF3 940 aa14.52□□□□□ -0.09
UPF3A-210ENST00000493727 SMCR8Q8TEV9 937 aaPredicted RBP14.52□□□□□ -0.09
UPF3A-210ENST00000493727 TSC1Q92574 1164 aa14.52□□□□□ -0.09
UPF3A-210ENST00000493727 DHX36Q9H2U1 1008 aaKnown RBP14.52□□□□□ -0.09
UPF3A-210ENST00000493727 PIH1D3Q9NQM4 214 aaKnown RBP14.52□□□□□ -0.09
UPF3A-210ENST00000493727 PAK6Q9NQU5 681 aaPredicted RBP14.52□□□□□ -0.09
UPF3A-210ENST00000493727 BIN2Q9UBW5 565 aaPredicted RBP14.52□□□□□ -0.09
UPF3A-210ENST00000493727 HERC5Q9UII4 1024 aaKnown RBP14.52□□□□□ -0.09
UPF3A-210ENST00000493727 CCNYL3P0C7X3 344 aa14.51□□□□□ -0.09
UPF3A-210ENST00000493727 ELNP15502 786 aa14.51□□□□□ -0.09
UPF3A-210ENST00000493727 CTDSPL2Q05D32 466 aa14.51□□□□□ -0.09
UPF3A-210ENST00000493727 NAA16Q6N069 864 aaPredicted RBP14.51□□□□□ -0.09
UPF3A-210ENST00000493727 ZSCAN25Q6NSZ9 544 aa14.51□□□□□ -0.09
UPF3A-210ENST00000493727 AGTPBP1Q9UPW5 1226 aa14.51□□□□□ -0.09
UPF3A-210ENST00000493727 LAMA2P24043 3122 aaKnown RBP14.51□□□□□ -0.09
UPF3A-210ENST00000493727 TRIM75PA6NK02 468 aa14.5□□□□□ -0.09
UPF3A-210ENST00000493727 CAPN2P17655 700 aa14.5□□□□□ -0.09
UPF3A-210ENST00000493727 CAP2P40123 477 aa14.5□□□□□ -0.09
UPF3A-210ENST00000493727 PABPC4Q13310 644 aaKnown RBP eCLIP14.5□□□□□ -0.09
UPF3A-210ENST00000493727 TMED8Q6PL24 325 aaPredicted RBP14.5□□□□□ -0.09
UPF3A-210ENST00000493727 TICAM2Q86XR7 235 aa14.5□□□□□ -0.09
UPF3A-210ENST00000493727 PRKD2Q9BZL6 878 aa14.5□□□□□ -0.09
UPF3A-210ENST00000493727 AS3MTQ9HBK9 375 aa14.5□□□□□ -0.09
UPF3A-210ENST00000493727 EVA1BQ9NVM1 165 aa14.5□□□□□ -0.09
UPF3A-210ENST00000493727 PI4KBQ9UBF8 816 aa14.5□□□□□ -0.09
UPF3A-210ENST00000493727 PLXNB2O15031 1838 aa14.5□□□□□ -0.09
UPF3A-210ENST00000493727 MYH1P12882 1939 aa14.49□□□□□ -0.09
UPF3A-210ENST00000493727 ZFYP08048 801 aaPredicted RBP14.49□□□□□ -0.09
UPF3A-210ENST00000493727 SLURP2P0DP57 97 aa14.49□□□□□ -0.09
UPF3A-210ENST00000493727 CERS3Q8IU89 383 aa14.49□□□□□ -0.09
UPF3A-210ENST00000493727 ZNF280CQ8ND82 737 aa14.49□□□□□ -0.09
UPF3A-210ENST00000493727 DEFB118Q96PH6 123 aa14.49□□□□□ -0.09
UPF3A-210ENST00000493727 V9GY48 417 aaPredicted RBP14.49□□□□□ -0.09
UPF3A-210ENST00000493727 VCANP13611 3396 aa14.49□□□□□ -0.09
UPF3A-210ENST00000493727 USP17L5A8MUK1 530 aa14.48□□□□□ -0.09
UPF3A-210ENST00000493727 TNPO2O14787 897 aaKnown RBP14.48□□□□□ -0.09
UPF3A-210ENST00000493727 RNF113AO15541 343 aaKnown RBP14.48□□□□□ -0.09
UPF3A-210ENST00000493727 F12P00748 615 aaPredicted RBP14.48□□□□□ -0.09
UPF3A-210ENST00000493727 CHMLP26374 656 aa14.48□□□□□ -0.09
UPF3A-210ENST00000493727 SLC19A1P41440 591 aa14.48□□□□□ -0.09
UPF3A-210ENST00000493727 GCLCP48506 637 aaPredicted RBP14.48□□□□□ -0.09
UPF3A-210ENST00000493727 SLC9C2Q5TAH2 1124 aa14.48□□□□□ -0.09
UPF3A-210ENST00000493727 PTCRAQ6ISU1 281 aaPredicted RBP14.48□□□□□ -0.09
UPF3A-210ENST00000493727 MAGEB6Q8N7X4 407 aa14.48□□□□□ -0.09
UPF3A-210ENST00000493727 SH3RF3Q8TEJ3 882 aaPredicted RBP14.48□□□□□ -0.09
UPF3A-210ENST00000493727 RUFY2Q8WXA3 655 aa14.48□□□□□ -0.09
UPF3A-210ENST00000493727 GINM1Q9NU53 330 aa14.48□□□□□ -0.09
UPF3A-210ENST00000493727 AATFQ9NY61 560 aaKnown RBP eCLIP14.48□□□□□ -0.09
UPF3A-210ENST00000493727 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.48□□□□□ -0.09
UPF3A-210ENST00000493727 DDX60LQ5H9U9 1706 aaKnown RBP14.48□□□□□ -0.09
UPF3A-210ENST00000493727 SIPA1L1O43166 1804 aa14.48□□□□□ -0.09
UPF3A-210ENST00000493727 AP1G2O75843 785 aa14.47□□□□□ -0.09
UPF3A-210ENST00000493727 ASNSP08243 561 aa14.47□□□□□ -0.09
UPF3A-210ENST00000493727 PDE6AP16499 860 aa14.47□□□□□ -0.09
UPF3A-210ENST00000493727 SPP2Q13103 211 aa14.47□□□□□ -0.09
UPF3A-210ENST00000493727 NMIQ13287 307 aaPredicted RBP14.47□□□□□ -0.09
UPF3A-210ENST00000493727 FAM110CQ1W6H9 321 aa14.47□□□□□ -0.09
UPF3A-210ENST00000493727 CWC27Q6UX04 472 aaKnown RBP14.47□□□□□ -0.09
UPF3A-210ENST00000493727 FOXP4Q8IVH2 680 aaPredicted RBP14.47□□□□□ -0.09
UPF3A-210ENST00000493727 DIS3LQ8TF46 1054 aaKnown RBP14.47□□□□□ -0.09
UPF3A-210ENST00000493727 COA7Q96BR5 231 aa14.47□□□□□ -0.09
UPF3A-210ENST00000493727 TRIM34Q9BYJ4 488 aa14.47□□□□□ -0.09
UPF3A-210ENST00000493727 ZNF532Q9HCE3 1301 aa14.46□□□□□ -0.09
UPF3A-210ENST00000493727 FAM196BA6NMK8 535 aa14.46□□□□□ -0.09
UPF3A-210ENST00000493727 DLL1O00548 723 aa14.46□□□□□ -0.09
UPF3A-210ENST00000493727 EIF5BO60841 1220 aaKnown RBP14.46□□□□□ -0.09
UPF3A-210ENST00000493727 HLA-DOAP06340 250 aa14.46□□□□□ -0.09
UPF3A-210ENST00000493727 CYP7A1P22680 504 aa14.46□□□□□ -0.09
UPF3A-210ENST00000493727 ADD2P35612 726 aa14.46□□□□□ -0.09
UPF3A-210ENST00000493727 RPIAP49247 311 aa14.46□□□□□ -0.09
UPF3A-210ENST00000493727 KCNH2Q12809 1159 aa14.46□□□□□ -0.09
UPF3A-210ENST00000493727 TMEM259Q4ZIN3 620 aa14.46□□□□□ -0.09
UPF3A-210ENST00000493727 TREML2Q5T2D2 321 aa14.46□□□□□ -0.09
UPF3A-210ENST00000493727 CCDC84Q86UT8 332 aaPredicted RBP14.46□□□□□ -0.09
UPF3A-210ENST00000493727 ANKRD13CQ8N6S4 541 aa14.46□□□□□ -0.09
UPF3A-210ENST00000493727 SLC17A8Q8NDX2 589 aa14.46□□□□□ -0.09
UPF3A-210ENST00000493727 TGFBRAP1Q8WUH2 860 aa14.46□□□□□ -0.09
UPF3A-210ENST00000493727 APPBP2Q92624 585 aa14.46□□□□□ -0.09
UPF3A-210ENST00000493727 PAWRQ96IZ0 340 aaKnown RBP14.46□□□□□ -0.09
UPF3A-210ENST00000493727 GDF15Q99988 308 aa14.46□□□□□ -0.09
UPF3A-210ENST00000493727 DNAH12Q6ZR08 3092 aa14.46□□□□□ -0.09
UPF3A-210ENST00000493727 FLT1P17948 1338 aa14.45□□□□□ -0.1
UPF3A-210ENST00000493727 TFRCP02786 760 aaKnown RBP14.45□□□□□ -0.1
UPF3A-210ENST00000493727 UBE3CQ15386 1083 aa14.45□□□□□ -0.1
UPF3A-210ENST00000493727 C8orf34Q49A92 452 aa14.45□□□□□ -0.1
UPF3A-210ENST00000493727 CRACR2BQ8N4Y2 399 aaPredicted RBP14.45□□□□□ -0.1
UPF3A-210ENST00000493727 FAM227BQ96M60 508 aa14.45□□□□□ -0.1
UPF3A-210ENST00000493727 WDR18Q9BV38 432 aa14.45□□□□□ -0.1
UPF3A-210ENST00000493727 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.45□□□□□ -0.1
UPF3A-210ENST00000493727 MYH7P12883 1935 aa14.45□□□□□ -0.1
UPF3A-210ENST00000493727 RAD50Q92878 1312 aa14.44□□□□□ -0.1
UPF3A-210ENST00000493727 EYSQ5T1H1 3165 aa14.44□□□□□ -0.1
UPF3A-210ENST00000493727 A0A0D9SFI3 127 aa14.44□□□□□ -0.1
UPF3A-210ENST00000493727 C19orf81C9J6K1 198 aa14.44□□□□□ -0.1
UPF3A-210ENST00000493727 CHGBP05060 677 aa14.44□□□□□ -0.1
UPF3A-210ENST00000493727 BMP8BP34820 402 aa14.44□□□□□ -0.1
UPF3A-210ENST00000493727 HMGCS2P54868 508 aa14.44□□□□□ -0.1
UPF3A-210ENST00000493727 SLFNL1Q499Z3 407 aa14.44□□□□□ -0.1
UPF3A-210ENST00000493727 ZMYM1Q5SVZ6 1142 aa14.44□□□□□ -0.1
UPF3A-210ENST00000493727 NECAB2Q7Z6G3 386 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms