RNA–Protein interactions for RNA: ENST00000493594.6

GBP3-208, Transcript of guanylate binding protein 3, humanhuman

TSL 1 (best)

Gene GBP3, Length 2,561 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GBP3-208ENST00000493594 EPB41L4AQ9HCS5 686 aaPredicted RBP9.34□□□□□ -0.91
GBP3-208ENST00000493594 CAPN11Q9UMQ6 739 aa9.34□□□□□ -0.91
GBP3-208ENST00000493594 ERICH2A1L162 156 aa9.33□□□□□ -0.92
GBP3-208ENST00000493594 B4DLN1 442 aa9.33□□□□□ -0.92
GBP3-208ENST00000493594 PDE6AP16499 860 aa9.33□□□□□ -0.92
GBP3-208ENST00000493594 SCP2P22307 547 aa9.33□□□□□ -0.92
GBP3-208ENST00000493594 GPTP24298 496 aa9.33□□□□□ -0.92
GBP3-208ENST00000493594 CYLC1P35663 651 aaPredicted RBP9.33□□□□□ -0.92
GBP3-208ENST00000493594 CABP4P57796 275 aa9.33□□□□□ -0.92
GBP3-208ENST00000493594 IFT88Q13099 833 aa9.33□□□□□ -0.92
GBP3-208ENST00000493594 IQCEQ6IPM2 695 aa9.33□□□□□ -0.92
GBP3-208ENST00000493594 NFRKBQ6P4R8 1299 aa9.33□□□□□ -0.92
GBP3-208ENST00000493594 IFNL2Q8IZJ0 200 aa9.33□□□□□ -0.92
GBP3-208ENST00000493594 SYNE4Q8N205 404 aa9.33□□□□□ -0.92
GBP3-208ENST00000493594 ARMT1Q9H993 441 aa9.33□□□□□ -0.92
GBP3-208ENST00000493594 MLXIPQ9HAP2 919 aa9.33□□□□□ -0.92
GBP3-208ENST00000493594 ZNHIT6Q9NWK9 470 aaKnown RBP9.33□□□□□ -0.92
GBP3-208ENST00000493594 CAPN6Q9Y6Q1 641 aa9.33□□□□□ -0.92
GBP3-208ENST00000493594 ESYT3A0FGR9 886 aa9.33□□□□□ -0.92
GBP3-208ENST00000493594 ECM2O94769 699 aaPredicted RBP9.33□□□□□ -0.92
GBP3-208ENST00000493594 MOCS3O95396 460 aa9.33□□□□□ -0.92
GBP3-208ENST00000493594 SSBP05455 408 aaKnown RBP eCLIP9.33□□□□□ -0.92
GBP3-208ENST00000493594 PLEKP08567 350 aaPredicted RBP9.33□□□□□ -0.92
GBP3-208ENST00000493594 AKNAD1Q5T1N1 836 aa9.33□□□□□ -0.92
GBP3-208ENST00000493594 CCDC181Q5TID7 509 aa9.33□□□□□ -0.92
GBP3-208ENST00000493594 ZNF658Q5TYW1 1059 aaPredicted RBP9.33□□□□□ -0.92
GBP3-208ENST00000493594 NAA35Q5VZE5 725 aa9.33□□□□□ -0.92
GBP3-208ENST00000493594 IFT81Q8WYA0 676 aa9.33□□□□□ -0.92
GBP3-208ENST00000493594 SNX12Q9UMY4 172 aa9.33□□□□□ -0.92
GBP3-208ENST00000493594 ECM29Q5VYK3 1845 aa9.33□□□□□ -0.92
GBP3-208ENST00000493594 NCK2O43639 380 aa9.32□□□□□ -0.92
GBP3-208ENST00000493594 ZPR1O75312 459 aa9.32□□□□□ -0.92
GBP3-208ENST00000493594 FSBPO95073 299 aa9.32□□□□□ -0.92
GBP3-208ENST00000493594 MBD4O95243 580 aa9.32□□□□□ -0.92
GBP3-208ENST00000493594 RPN1P04843 607 aaKnown RBP9.32□□□□□ -0.92
GBP3-208ENST00000493594 TATP17735 454 aaPredicted RBP9.32□□□□□ -0.92
GBP3-208ENST00000493594 LSP1P33241 339 aa9.32□□□□□ -0.92
GBP3-208ENST00000493594 KRT2P35908 639 aa9.32□□□□□ -0.92
GBP3-208ENST00000493594 DNA2P51530 1060 aa9.32□□□□□ -0.92
GBP3-208ENST00000493594 EPHB4P54760 987 aa9.32□□□□□ -0.92
GBP3-208ENST00000493594 SKOR1P84550 965 aa9.32□□□□□ -0.92
GBP3-208ENST00000493594 SF3B2Q13435 895 aaKnown RBP9.32□□□□□ -0.92
GBP3-208ENST00000493594 LDHAL6AQ6ZMR3 332 aa9.32□□□□□ -0.92
GBP3-208ENST00000493594 ZNF654Q8IZM8 581 aa9.32□□□□□ -0.92
GBP3-208ENST00000493594 MMGT1Q8N4V1 131 aa9.32□□□□□ -0.92
GBP3-208ENST00000493594 ANKRD13CQ8N6S4 541 aa9.32□□□□□ -0.92
GBP3-208ENST00000493594 CCDC43Q96MW1 224 aaKnown RBP9.32□□□□□ -0.92
GBP3-208ENST00000493594 ORAI2Q96SN7 254 aa9.32□□□□□ -0.92
GBP3-208ENST00000493594 PLIN2Q99541 437 aa9.32□□□□□ -0.92
GBP3-208ENST00000493594 KLC4Q9NSK0 619 aa9.32□□□□□ -0.92
GBP3-208ENST00000493594 V9GY48 417 aaPredicted RBP9.32□□□□□ -0.92
GBP3-208ENST00000493594 ANO9A1A5B4 782 aa9.32□□□□□ -0.92
GBP3-208ENST00000493594 ZSCAN5CA6NGD5 496 aaPredicted RBP9.32□□□□□ -0.92
GBP3-208ENST00000493594 PATL2C9JE40 543 aaKnown RBP9.32□□□□□ -0.92
GBP3-208ENST00000493594 H7C1D1 291 aa9.32□□□□□ -0.92
GBP3-208ENST00000493594 CLGNO14967 610 aa9.32□□□□□ -0.92
GBP3-208ENST00000493594 ZNF263O14978 683 aa9.32□□□□□ -0.92
GBP3-208ENST00000493594 FAM153BP0C7A2 387 aa9.32□□□□□ -0.92
GBP3-208ENST00000493594 MCM7P33993 719 aa9.32□□□□□ -0.92
GBP3-208ENST00000493594 GUCY2FP51841 1108 aa9.32□□□□□ -0.92
GBP3-208ENST00000493594 NAP1L1P55209 391 aaKnown RBP9.32□□□□□ -0.92
GBP3-208ENST00000493594 DDR1Q08345 913 aa9.32□□□□□ -0.92
GBP3-208ENST00000493594 IFIT5Q13325 482 aaKnown RBP9.32□□□□□ -0.92
GBP3-208ENST00000493594 FAM153CQ494X1 144 aa9.32□□□□□ -0.92
GBP3-208ENST00000493594 ANKLE2Q86XL3 938 aa9.32□□□□□ -0.92
GBP3-208ENST00000493594 CEP57Q86XR8 500 aa9.32□□□□□ -0.92
GBP3-208ENST00000493594 ZNF507Q8TCN5 953 aa9.32□□□□□ -0.92
GBP3-208ENST00000493594 ZNF473Q8WTR7 871 aaKnown RBP9.32□□□□□ -0.92
GBP3-208ENST00000493594 FERMT2Q96AC1 680 aa9.32□□□□□ -0.92
GBP3-208ENST00000493594 TRIM47Q96LD4 638 aa9.32□□□□□ -0.92
GBP3-208ENST00000493594 CCDC42Q96M95 316 aa9.32□□□□□ -0.92
GBP3-208ENST00000493594 STIM2Q9P246 746 aa9.32□□□□□ -0.92
GBP3-208ENST00000493594 FAM153AQ9UHL3 310 aa9.32□□□□□ -0.92
GBP3-208ENST00000493594 NFU1Q9UMS0 254 aa9.32□□□□□ -0.92
GBP3-208ENST00000493594 LGALS16A8MUM7 142 aa9.31□□□□□ -0.92
GBP3-208ENST00000493594 CHUKO15111 745 aa9.31□□□□□ -0.92
GBP3-208ENST00000493594 CYP27B1O15528 508 aa9.31□□□□□ -0.92
GBP3-208ENST00000493594 GTPBP6O43824 516 aaPredicted RBP9.31□□□□□ -0.92
GBP3-208ENST00000493594 PHKA1P46020 1223 aa9.31□□□□□ -0.92
GBP3-208ENST00000493594 CARSP49589 748 aaKnown RBP9.31□□□□□ -0.92
GBP3-208ENST00000493594 HDLBPQ00341 1268 aaKnown RBP9.31□□□□□ -0.92
GBP3-208ENST00000493594 TBC1D8BQ0IIM8 1120 aa9.31□□□□□ -0.92
GBP3-208ENST00000493594 UBE3CQ15386 1083 aa9.31□□□□□ -0.92
GBP3-208ENST00000493594 SPA17Q15506 151 aa9.31□□□□□ -0.92
GBP3-208ENST00000493594 TTC38Q5R3I4 469 aa9.31□□□□□ -0.92
GBP3-208ENST00000493594 ALS2CLQ60I27 953 aa9.31□□□□□ -0.92
GBP3-208ENST00000493594 PDXDC2PQ6P474 469 aa9.31□□□□□ -0.92
GBP3-208ENST00000493594 MAGEB6Q8N7X4 407 aa9.31□□□□□ -0.92
GBP3-208ENST00000493594 N4BP2L2Q92802 583 aaPredicted RBP9.31□□□□□ -0.92
GBP3-208ENST00000493594 MS4A14Q96JA4 679 aa9.31□□□□□ -0.92
GBP3-208ENST00000493594 CCT8L2Q96SF2 557 aa9.31□□□□□ -0.92
GBP3-208ENST00000493594 OSBPL9Q96SU4 736 aa9.31□□□□□ -0.92
GBP3-208ENST00000493594 EPN3Q9H201 632 aa9.31□□□□□ -0.92
GBP3-208ENST00000493594 PPANQ9NQ55 473 aaKnown RBP9.31□□□□□ -0.92
GBP3-208ENST00000493594 MYO5AQ9Y4I1 1855 aaKnown RBP9.31□□□□□ -0.92
GBP3-208ENST00000493594 ZNF233A6NK53 670 aa9.31□□□□□ -0.92
GBP3-208ENST00000493594 RASSF10A6NK89 507 aa9.31□□□□□ -0.92
GBP3-208ENST00000493594 E7EVH7 732 aa9.31□□□□□ -0.92
GBP3-208ENST00000493594 SMIM22K7EJ46 135 aa9.31□□□□□ -0.92
GBP3-208ENST00000493594 NKRFO15226 690 aaKnown RBP eCLIP9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms