RNA–Protein interactions for RNA: ENST00000492932.5

PDCD4-210, Transcript of programmed cell death 4, humanhuman

TSL 3

Gene PDCD4, Length 813 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-210ENST00000492932 SLC39A5Q6ZMH5 540 aa13.8□□□□□ -0.2
PDCD4-210ENST00000492932 ANKRD35Q8N283 1001 aa13.8□□□□□ -0.2
PDCD4-210ENST00000492932 MSL3Q8N5Y2 521 aaKnown RBP13.8□□□□□ -0.2
PDCD4-210ENST00000492932 GMCL1P1Q8NEA9 526 aa13.8□□□□□ -0.2
PDCD4-210ENST00000492932 MKL1Q969V6 931 aa13.8□□□□□ -0.2
PDCD4-210ENST00000492932 PRDM5Q9NQX1 630 aaPredicted RBP13.8□□□□□ -0.2
PDCD4-210ENST00000492932 MTMR4Q9NYA4 1195 aa13.8□□□□□ -0.2
PDCD4-210ENST00000492932 PARP14Q460N5 1801 aa13.79□□□□□ -0.2
PDCD4-210ENST00000492932 TSPY2A6NKD2 308 aa13.79□□□□□ -0.2
PDCD4-210ENST00000492932 BMP3P12645 472 aa13.79□□□□□ -0.2
PDCD4-210ENST00000492932 ADCYAP1R1P41586 468 aa13.79□□□□□ -0.2
PDCD4-210ENST00000492932 TFAP4Q01664 338 aa13.79□□□□□ -0.2
PDCD4-210ENST00000492932 LRRC41Q15345 812 aa13.79□□□□□ -0.2
PDCD4-210ENST00000492932 FAM47AQ5JRC9 791 aa13.79□□□□□ -0.2
PDCD4-210ENST00000492932 SLFN13Q68D06 897 aa13.79□□□□□ -0.2
PDCD4-210ENST00000492932 LRRC47Q8N1G4 583 aaKnown RBP13.79□□□□□ -0.2
PDCD4-210ENST00000492932 REPS2Q8NFH8 660 aa13.79□□□□□ -0.2
PDCD4-210ENST00000492932 NEDD1Q8NHV4 660 aa13.79□□□□□ -0.2
PDCD4-210ENST00000492932 EVI5LQ96CN4 794 aa13.79□□□□□ -0.2
PDCD4-210ENST00000492932 SEC62Q99442 399 aaKnown RBP13.79□□□□□ -0.2
PDCD4-210ENST00000492932 COL11A1P12107 1806 aaPredicted RBP13.78□□□□□ -0.2
PDCD4-210ENST00000492932 IGKV6D-41A0A0C4DH26 115 aa13.78□□□□□ -0.2
PDCD4-210ENST00000492932 ATP2A1O14983 1001 aa13.78□□□□□ -0.2
PDCD4-210ENST00000492932 SLC1A4P43007 532 aa13.78□□□□□ -0.2
PDCD4-210ENST00000492932 STAT2P52630 851 aa13.78□□□□□ -0.2
PDCD4-210ENST00000492932 OAZ1P54368 228 aa13.78□□□□□ -0.2
PDCD4-210ENST00000492932 DEFB123Q8N688 67 aa13.78□□□□□ -0.2
PDCD4-210ENST00000492932 CHST13Q8NET6 341 aa13.78□□□□□ -0.2
PDCD4-210ENST00000492932 OTUD7AQ8TE49 926 aaPredicted RBP13.78□□□□□ -0.2
PDCD4-210ENST00000492932 CHURC1Q8WUH1 139 aa13.78□□□□□ -0.2
PDCD4-210ENST00000492932 FERMT2Q96AC1 680 aa13.78□□□□□ -0.2
PDCD4-210ENST00000492932 RAVER2Q9HCJ3 691 aaKnown RBP13.78□□□□□ -0.2
PDCD4-210ENST00000492932 FAM184BQ9ULE4 1060 aa13.78□□□□□ -0.2
PDCD4-210ENST00000492932 STX8Q9UNK0 236 aa13.78□□□□□ -0.2
PDCD4-210ENST00000492932 GREB1LQ9C091 1923 aaPredicted RBP13.78□□□□□ -0.2
PDCD4-210ENST00000492932 TMEM232C9JQI7 657 aa13.77□□□□□ -0.21
PDCD4-210ENST00000492932 FAM160B2Q86V87 743 aa13.77□□□□□ -0.21
PDCD4-210ENST00000492932 SYNGAP1Q96PV0 1343 aa13.77□□□□□ -0.21
PDCD4-210ENST00000492932 PLIN4Q96Q06 1357 aa13.77□□□□□ -0.21
PDCD4-210ENST00000492932 CRBNQ96SW2 442 aa13.77□□□□□ -0.21
PDCD4-210ENST00000492932 SPC25Q9HBM1 224 aa13.77□□□□□ -0.21
PDCD4-210ENST00000492932 SLC38A10Q9HBR0 1119 aa13.77□□□□□ -0.21
PDCD4-210ENST00000492932 HELLSQ9NRZ9 838 aa13.77□□□□□ -0.21
PDCD4-210ENST00000492932 TOMM22Q9NS69 142 aa13.77□□□□□ -0.21
PDCD4-210ENST00000492932 ZHX1Q9UKY1 873 aaPredicted RBP13.77□□□□□ -0.21
PDCD4-210ENST00000492932 AAMPQ13685 434 aa13.76□□□□□ -0.21
PDCD4-210ENST00000492932 TRIM60Q495X7 471 aa13.76□□□□□ -0.21
PDCD4-210ENST00000492932 ZNF467Q7Z7K2 595 aaPredicted RBP13.76□□□□□ -0.21
PDCD4-210ENST00000492932 NUP133Q8WUM0 1156 aa13.76□□□□□ -0.21
PDCD4-210ENST00000492932 GMCL1Q96IK5 515 aa13.76□□□□□ -0.21
PDCD4-210ENST00000492932 RIPK3Q9Y572 518 aa13.76□□□□□ -0.21
PDCD4-210ENST00000492932 MYH4Q9Y623 1939 aa13.76□□□□□ -0.21
PDCD4-210ENST00000492932 TRIM6-TRIM34B2RNG4 842 aa13.75□□□□□ -0.21
PDCD4-210ENST00000492932 RANBP6O60518 1105 aaKnown RBP13.75□□□□□ -0.21
PDCD4-210ENST00000492932 PGK1P00558 417 aa13.75□□□□□ -0.21
PDCD4-210ENST00000492932 ZNF865P0CJ78 1059 aaPredicted RBP13.75□□□□□ -0.21
PDCD4-210ENST00000492932 CTDSPL2Q05D32 466 aa13.75□□□□□ -0.21
PDCD4-210ENST00000492932 HDAC1Q13547 482 aaPredicted RBP13.75□□□□□ -0.21
PDCD4-210ENST00000492932 C1orf53Q5VUE5 145 aa13.75□□□□□ -0.21
PDCD4-210ENST00000492932 MAMDC4Q6UXC1 1216 aa13.75□□□□□ -0.21
PDCD4-210ENST00000492932 CCDC129Q6ZRS4 1044 aa13.75□□□□□ -0.21
PDCD4-210ENST00000492932 SLC17A8Q8NDX2 589 aa13.75□□□□□ -0.21
PDCD4-210ENST00000492932 STAG1Q8WVM7 1258 aa13.75□□□□□ -0.21
PDCD4-210ENST00000492932 TSEN34Q9BSV6 310 aaKnown RBP13.75□□□□□ -0.21
PDCD4-210ENST00000492932 ACAD9Q9H845 621 aa13.75□□□□□ -0.21
PDCD4-210ENST00000492932 HOMER2Q9NSB8 354 aa13.75□□□□□ -0.21
PDCD4-210ENST00000492932 PHF24Q9UPV7 400 aa13.75□□□□□ -0.21
PDCD4-210ENST00000492932 TACC3Q9Y6A5 838 aa13.75□□□□□ -0.21
PDCD4-210ENST00000492932 PLXNA1Q9UIW2 1896 aa13.74□□□□□ -0.21
PDCD4-210ENST00000492932 A0A1W2PQ45 241 aaPredicted RBP13.74□□□□□ -0.21
PDCD4-210ENST00000492932 A0A1W2PQY0 241 aa13.74□□□□□ -0.21
PDCD4-210ENST00000492932 TAL1P17542 331 aaPredicted RBP13.74□□□□□ -0.21
PDCD4-210ENST00000492932 MCCP23508 829 aa13.74□□□□□ -0.21
PDCD4-210ENST00000492932 PDE1AP54750 535 aa13.74□□□□□ -0.21
PDCD4-210ENST00000492932 MFAP1P55081 439 aaKnown RBP13.74□□□□□ -0.21
PDCD4-210ENST00000492932 SNX17Q15036 470 aa13.74□□□□□ -0.21
PDCD4-210ENST00000492932 TKFCQ3LXA3 575 aa13.74□□□□□ -0.21
PDCD4-210ENST00000492932 TICAM2Q86XR7 235 aa13.74□□□□□ -0.21
PDCD4-210ENST00000492932 PCSK9Q8NBP7 692 aaKnown RBP13.74□□□□□ -0.21
PDCD4-210ENST00000492932 ABHD16BQ9H3Z7 469 aa13.74□□□□□ -0.21
PDCD4-210ENST00000492932 RWDD1Q9H446 243 aaPredicted RBP13.74□□□□□ -0.21
PDCD4-210ENST00000492932 STARD7Q9NQZ5 370 aa13.74□□□□□ -0.21
PDCD4-210ENST00000492932 TRIOBPQ9H2D6 2365 aa13.74□□□□□ -0.21
PDCD4-210ENST00000492932 ZNFX1Q9P2E3 1918 aaKnown RBP13.74□□□□□ -0.21
PDCD4-210ENST00000492932 CEP290O15078 2479 aa13.73□□□□□ -0.21
PDCD4-210ENST00000492932 DNAJC25-GNG10A0A024R161 153 aa13.73□□□□□ -0.21
PDCD4-210ENST00000492932 MOXD2PA6NHM9 499 aa13.73□□□□□ -0.21
PDCD4-210ENST00000492932 DCDC2CA8MYV0 355 aa13.73□□□□□ -0.21
PDCD4-210ENST00000492932 POTEB2H3BUK9 544 aa13.73□□□□□ -0.21
PDCD4-210ENST00000492932 DUSP11O75319 330 aaKnown RBP13.73□□□□□ -0.21
PDCD4-210ENST00000492932 CLTBP09497 229 aa13.73□□□□□ -0.21
PDCD4-210ENST00000492932 ACVR2BQ13705 512 aa13.73□□□□□ -0.21
PDCD4-210ENST00000492932 CCDC96Q2M329 555 aa13.73□□□□□ -0.21
PDCD4-210ENST00000492932 MCMDC2Q4G0Z9 681 aa13.73□□□□□ -0.21
PDCD4-210ENST00000492932 RCSD1Q6JBY9 416 aa13.73□□□□□ -0.21
PDCD4-210ENST00000492932 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.73□□□□□ -0.21
PDCD4-210ENST00000492932 RILPL2Q969X0 211 aa13.73□□□□□ -0.21
PDCD4-210ENST00000492932 VTI1AQ96AJ9 217 aa13.73□□□□□ -0.21
PDCD4-210ENST00000492932 CHMP4CQ96CF2 233 aa13.73□□□□□ -0.21
PDCD4-210ENST00000492932 YTHDC1Q96MU7 727 aaKnown RBP13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms