RNA–Protein interactions for RNA: ENST00000492851.1

COL6A1-205, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 3

Gene COL6A1, Length 435 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-205ENST00000492851 SALL3Q9BXA9 1300 aa14.78□□□□□ -0.04
COL6A1-205ENST00000492851 PGK2P07205 417 aa14.78□□□□□ -0.04
COL6A1-205ENST00000492851 PDE1AP54750 535 aa14.78□□□□□ -0.04
COL6A1-205ENST00000492851 LRIT3Q3SXY7 679 aa14.78□□□□□ -0.04
COL6A1-205ENST00000492851 GJC2Q5T442 439 aaPredicted RBP14.78□□□□□ -0.04
COL6A1-205ENST00000492851 SLFN13Q68D06 897 aa14.78□□□□□ -0.04
COL6A1-205ENST00000492851 SLC39A5Q6ZMH5 540 aa14.78□□□□□ -0.04
COL6A1-205ENST00000492851 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.78□□□□□ -0.04
COL6A1-205ENST00000492851 ZNF467Q7Z7K2 595 aaPredicted RBP14.78□□□□□ -0.04
COL6A1-205ENST00000492851 FAM160B2Q86V87 743 aa14.78□□□□□ -0.04
COL6A1-205ENST00000492851 KIFC2Q96AC6 838 aa14.78□□□□□ -0.04
COL6A1-205ENST00000492851 NUP88Q99567 741 aaPredicted RBP14.78□□□□□ -0.04
COL6A1-205ENST00000492851 ANAPC4Q9UJX5 808 aa14.78□□□□□ -0.04
COL6A1-205ENST00000492851 SYNGAP1Q96PV0 1343 aa14.77□□□□□ -0.04
COL6A1-205ENST00000492851 RLFQ13129 1914 aa14.77□□□□□ -0.04
COL6A1-205ENST00000492851 TSPY2A6NKD2 308 aa14.77□□□□□ -0.05
COL6A1-205ENST00000492851 PLA2G6O60733 806 aa14.77□□□□□ -0.05
COL6A1-205ENST00000492851 AKR1A1P14550 325 aa14.77□□□□□ -0.05
COL6A1-205ENST00000492851 STAT2P52630 851 aa14.77□□□□□ -0.05
COL6A1-205ENST00000492851 ALX1Q15699 326 aa14.77□□□□□ -0.05
COL6A1-205ENST00000492851 PRAMEF19Q5SWL8 479 aa14.77□□□□□ -0.05
COL6A1-205ENST00000492851 C1orf53Q5VUE5 145 aa14.77□□□□□ -0.05
COL6A1-205ENST00000492851 MAMDC4Q6UXC1 1216 aa14.77□□□□□ -0.05
COL6A1-205ENST00000492851 CPXCR1Q8N123 301 aa14.77□□□□□ -0.05
COL6A1-205ENST00000492851 ANKRD35Q8N283 1001 aa14.77□□□□□ -0.05
COL6A1-205ENST00000492851 GMCL1Q96IK5 515 aa14.77□□□□□ -0.05
COL6A1-205ENST00000492851 XPNPEP3Q9NQH7 507 aa14.77□□□□□ -0.05
COL6A1-205ENST00000492851 MYCNP04198 464 aaPredicted RBP14.76□□□□□ -0.05
COL6A1-205ENST00000492851 SLC1A4P43007 532 aa14.76□□□□□ -0.05
COL6A1-205ENST00000492851 ATN1P54259 1190 aaPredicted RBP14.76□□□□□ -0.05
COL6A1-205ENST00000492851 MFAP1P55081 439 aaKnown RBP14.76□□□□□ -0.05
COL6A1-205ENST00000492851 LRRC41Q15345 812 aa14.76□□□□□ -0.05
COL6A1-205ENST00000492851 MCMDC2Q4G0Z9 681 aa14.76□□□□□ -0.05
COL6A1-205ENST00000492851 FAM47AQ5JRC9 791 aa14.76□□□□□ -0.05
COL6A1-205ENST00000492851 STAG1Q8WVM7 1258 aa14.76□□□□□ -0.05
COL6A1-205ENST00000492851 FAM184BQ9ULE4 1060 aa14.76□□□□□ -0.05
COL6A1-205ENST00000492851 STX8Q9UNK0 236 aa14.76□□□□□ -0.05
COL6A1-205ENST00000492851 DNAJC25-GNG10A0A024R161 153 aa14.75□□□□□ -0.05
COL6A1-205ENST00000492851 TMEM232C9JQI7 657 aa14.75□□□□□ -0.05
COL6A1-205ENST00000492851 SLC4A3P48751 1232 aa14.75□□□□□ -0.05
COL6A1-205ENST00000492851 NT5C2P49902 561 aa14.75□□□□□ -0.05
COL6A1-205ENST00000492851 RTP1P59025 263 aa14.75□□□□□ -0.05
COL6A1-205ENST00000492851 IKQ13123 557 aaPredicted RBP14.75□□□□□ -0.05
COL6A1-205ENST00000492851 SNX17Q15036 470 aa14.75□□□□□ -0.05
COL6A1-205ENST00000492851 TKFCQ3LXA3 575 aa14.75□□□□□ -0.05
COL6A1-205ENST00000492851 ANO1Q5XXA6 986 aa14.75□□□□□ -0.05
COL6A1-205ENST00000492851 LRRC47Q8N1G4 583 aaKnown RBP14.75□□□□□ -0.05
COL6A1-205ENST00000492851 TSEN34Q9BSV6 310 aaKnown RBP14.75□□□□□ -0.05
COL6A1-205ENST00000492851 RAVER2Q9HCJ3 691 aaKnown RBP14.75□□□□□ -0.05
COL6A1-205ENST00000492851 ISY1Q9ULR0 285 aaKnown RBP14.75□□□□□ -0.05
COL6A1-205ENST00000492851 RIPK3Q9Y572 518 aa14.75□□□□□ -0.05
COL6A1-205ENST00000492851 ORC4O43929 436 aa14.74□□□□□ -0.05
COL6A1-205ENST00000492851 RANBP6O60518 1105 aaKnown RBP14.74□□□□□ -0.05
COL6A1-205ENST00000492851 FGRP09769 529 aa14.74□□□□□ -0.05
COL6A1-205ENST00000492851 ZNF865P0CJ78 1059 aaPredicted RBP14.74□□□□□ -0.05
COL6A1-205ENST00000492851 PCP11498 1178 aaKnown RBP14.74□□□□□ -0.05
COL6A1-205ENST00000492851 ADCYAP1R1P41586 468 aa14.74□□□□□ -0.05
COL6A1-205ENST00000492851 RCSD1Q6JBY9 416 aa14.74□□□□□ -0.05
COL6A1-205ENST00000492851 ABHD16BQ9H3Z7 469 aa14.74□□□□□ -0.05
COL6A1-205ENST00000492851 SPC25Q9HBM1 224 aa14.74□□□□□ -0.05
COL6A1-205ENST00000492851 PHF24Q9UPV7 400 aa14.74□□□□□ -0.05
COL6A1-205ENST00000492851 ATP11BQ9Y2G3 1177 aa14.74□□□□□ -0.05
COL6A1-205ENST00000492851 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.74□□□□□ -0.05
COL6A1-205ENST00000492851 GREB1LQ9C091 1923 aaPredicted RBP14.74□□□□□ -0.05
COL6A1-205ENST00000492851 TRIM6-TRIM34B2RNG4 842 aa14.73□□□□□ -0.05
COL6A1-205ENST00000492851 MCCP23508 829 aa14.73□□□□□ -0.05
COL6A1-205ENST00000492851 MDM2Q00987 491 aaPredicted RBP14.73□□□□□ -0.05
COL6A1-205ENST00000492851 CCDC129Q6ZRS4 1044 aa14.73□□□□□ -0.05
COL6A1-205ENST00000492851 SMC5Q8IY18 1101 aa14.73□□□□□ -0.05
COL6A1-205ENST00000492851 NUP133Q8WUM0 1156 aa14.73□□□□□ -0.05
COL6A1-205ENST00000492851 ACAD9Q9H845 621 aa14.73□□□□□ -0.05
COL6A1-205ENST00000492851 PNMA2Q9UL42 364 aa14.73□□□□□ -0.05
COL6A1-205ENST00000492851 TACC3Q9Y6A5 838 aa14.73□□□□□ -0.05
COL6A1-205ENST00000492851 ZMYM6O95789 1325 aa14.72□□□□□ -0.05
COL6A1-205ENST00000492851 TRIOBPQ9H2D6 2365 aa14.72□□□□□ -0.05
COL6A1-205ENST00000492851 MOXD2PA6NHM9 499 aa14.72□□□□□ -0.05
COL6A1-205ENST00000492851 DUSP11O75319 330 aaKnown RBP14.72□□□□□ -0.05
COL6A1-205ENST00000492851 FGAP02671 866 aa14.72□□□□□ -0.05
COL6A1-205ENST00000492851 NOVP48745 357 aa14.72□□□□□ -0.05
COL6A1-205ENST00000492851 CTDSPL2Q05D32 466 aa14.72□□□□□ -0.05
COL6A1-205ENST00000492851 ACVR2BQ13705 512 aa14.72□□□□□ -0.05
COL6A1-205ENST00000492851 DCAF4Q8WV16 495 aa14.72□□□□□ -0.05
COL6A1-205ENST00000492851 TTC14Q96N46 770 aa14.72□□□□□ -0.05
COL6A1-205ENST00000492851 LNPKQ9C0E8 428 aa14.72□□□□□ -0.05
COL6A1-205ENST00000492851 IL17RBQ9NRM6 502 aa14.72□□□□□ -0.05
COL6A1-205ENST00000492851 TCP11L1Q9NUJ3 509 aa14.72□□□□□ -0.05
COL6A1-205ENST00000492851 RANBP2P49792 3224 aaKnown RBP14.72□□□□□ -0.05
COL6A1-205ENST00000492851 ASB14A6NK59 587 aa14.71□□□□□ -0.05
COL6A1-205ENST00000492851 POTEB2H3BUK9 544 aa14.71□□□□□ -0.05
COL6A1-205ENST00000492851 SOX1O00570 391 aaPredicted RBP14.71□□□□□ -0.05
COL6A1-205ENST00000492851 FOXP2O15409 715 aa14.71□□□□□ -0.05
COL6A1-205ENST00000492851 SNAI1O95863 264 aaPredicted RBP14.71□□□□□ -0.05
COL6A1-205ENST00000492851 HSPD1P10809 573 aaKnown RBP14.71□□□□□ -0.05
COL6A1-205ENST00000492851 VPS53Q5VIR6 699 aa14.71□□□□□ -0.05
COL6A1-205ENST00000492851 CHD1LQ86WJ1 897 aa14.71□□□□□ -0.05
COL6A1-205ENST00000492851 PCSK9Q8NBP7 692 aaKnown RBP14.71□□□□□ -0.05
COL6A1-205ENST00000492851 RILPL2Q969X0 211 aa14.71□□□□□ -0.05
COL6A1-205ENST00000492851 FERMT2Q96AC1 680 aa14.71□□□□□ -0.05
COL6A1-205ENST00000492851 LRCH3Q96II8 777 aa14.71□□□□□ -0.05
COL6A1-205ENST00000492851 OSBPL3Q9H4L5 887 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms