RNA–Protein interactions for RNA: ENST00000492602.5

SEC13-219, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-219ENST00000492602 DSG3P32926 999 aa6.71□□□□□ -1.34
SEC13-219ENST00000492602 NUBP1P53384 320 aa6.71□□□□□ -1.34
SEC13-219ENST00000492602 USP14P54578 494 aa6.71□□□□□ -1.34
SEC13-219ENST00000492602 SIGLEC14Q08ET2 396 aa6.71□□□□□ -1.34
SEC13-219ENST00000492602 FLIIQ13045 1269 aa6.71□□□□□ -1.34
SEC13-219ENST00000492602 SMAD2Q15796 467 aaKnown RBP6.71□□□□□ -1.34
SEC13-219ENST00000492602 CLUL1Q15846 466 aa6.71□□□□□ -1.34
SEC13-219ENST00000492602 MCTP2Q6DN12 878 aa6.71□□□□□ -1.34
SEC13-219ENST00000492602 ZGPATQ8N5A5 531 aaKnown RBP6.71□□□□□ -1.34
SEC13-219ENST00000492602 TSPYL6Q8N831 410 aa6.71□□□□□ -1.34
SEC13-219ENST00000492602 FAM163AQ96GL9 167 aaPredicted RBP6.71□□□□□ -1.34
SEC13-219ENST00000492602 AGBL1Q96MI9 1066 aa6.71□□□□□ -1.34
SEC13-219ENST00000492602 TGS1Q96RS0 853 aaKnown RBP6.71□□□□□ -1.34
SEC13-219ENST00000492602 ZBED2Q9BTP6 218 aa6.71□□□□□ -1.34
SEC13-219ENST00000492602 RPAP3Q9H6T3 665 aaPredicted RBP6.71□□□□□ -1.34
SEC13-219ENST00000492602 GINM1Q9NU53 330 aa6.71□□□□□ -1.34
SEC13-219ENST00000492602 CLDND1Q9NY35 253 aa6.71□□□□□ -1.34
SEC13-219ENST00000492602 ZHX1Q9UKY1 873 aaPredicted RBP6.71□□□□□ -1.34
SEC13-219ENST00000492602 MROH7-TTC4A0A0A0MT08 1334 aa6.71□□□□□ -1.34
SEC13-219ENST00000492602 ZNF236Q9UL36 1845 aa6.71□□□□□ -1.34
SEC13-219ENST00000492602 GPR75-ASB3A0A0A6YYF3 556 aa6.7□□□□□ -1.34
SEC13-219ENST00000492602 GRM8O00222 908 aa6.7□□□□□ -1.34
SEC13-219ENST00000492602 B4GALT4O60513 344 aa6.7□□□□□ -1.34
SEC13-219ENST00000492602 HOXB3P14651 431 aaPredicted RBP6.7□□□□□ -1.34
SEC13-219ENST00000492602 ERVK-21P61565 698 aa6.7□□□□□ -1.34
SEC13-219ENST00000492602 GNAI1P63096 354 aa6.7□□□□□ -1.34
SEC13-219ENST00000492602 ITGA7Q13683 1181 aa6.7□□□□□ -1.34
SEC13-219ENST00000492602 COG2Q14746 738 aa6.7□□□□□ -1.34
SEC13-219ENST00000492602 TMCO2Q7Z6W1 182 aaPredicted RBP6.7□□□□□ -1.34
SEC13-219ENST00000492602 KIAA2013Q8IYS2 634 aa6.7□□□□□ -1.34
SEC13-219ENST00000492602 CRACR2BQ8N4Y2 399 aaPredicted RBP6.7□□□□□ -1.34
SEC13-219ENST00000492602 SLC43A3Q8NBI5 491 aa6.7□□□□□ -1.34
SEC13-219ENST00000492602 BANK1Q8NDB2 785 aa6.7□□□□□ -1.34
SEC13-219ENST00000492602 LPIN2Q92539 896 aa6.7□□□□□ -1.34
SEC13-219ENST00000492602 CHAMP1Q96JM3 812 aa6.7□□□□□ -1.34
SEC13-219ENST00000492602 MMP19Q99542 508 aa6.7□□□□□ -1.34
SEC13-219ENST00000492602 FTOQ9C0B1 505 aaKnown RBP eCLIP6.7□□□□□ -1.34
SEC13-219ENST00000492602 DNAJC18Q9H819 358 aa6.7□□□□□ -1.34
SEC13-219ENST00000492602 GNL3LQ9NVN8 582 aaKnown RBP6.7□□□□□ -1.34
SEC13-219ENST00000492602 IFT57Q9NWB7 429 aa6.7□□□□□ -1.34
SEC13-219ENST00000492602 HOXC10Q9NYD6 342 aa6.7□□□□□ -1.34
SEC13-219ENST00000492602 C9orf78Q9NZ63 289 aaPredicted RBP6.7□□□□□ -1.34
SEC13-219ENST00000492602 CTNNA3Q9UI47 895 aa6.7□□□□□ -1.34
SEC13-219ENST00000492602 DENND2AQ9ULE3 1009 aa6.7□□□□□ -1.34
SEC13-219ENST00000492602 MAP1BP46821 2468 aaKnown RBP6.7□□□□□ -1.34
SEC13-219ENST00000492602 MYH2Q9UKX2 1941 aa6.7□□□□□ -1.34
SEC13-219ENST00000492602 FASNP49327 2511 aaKnown RBP6.69□□□□□ -1.34
SEC13-219ENST00000492602 MBTPS2O43462 519 aa6.69□□□□□ -1.34
SEC13-219ENST00000492602 GH2P01242 217 aa6.69□□□□□ -1.34
SEC13-219ENST00000492602 KCNJ6P48051 423 aa6.69□□□□□ -1.34
SEC13-219ENST00000492602 GJA9P57773 515 aa6.69□□□□□ -1.34
SEC13-219ENST00000492602 BEX3Q00994 111 aa6.69□□□□□ -1.34
SEC13-219ENST00000492602 MKRN4PQ13434 485 aaPredicted RBP6.69□□□□□ -1.34
SEC13-219ENST00000492602 PTPROQ16827 1216 aa6.69□□□□□ -1.34
SEC13-219ENST00000492602 ZNF792Q3KQV3 632 aa6.69□□□□□ -1.34
SEC13-219ENST00000492602 TIGD5Q53EQ6 642 aa6.69□□□□□ -1.34
SEC13-219ENST00000492602 TCEAL5Q5H9L2 206 aa6.69□□□□□ -1.34
SEC13-219ENST00000492602 CXCL17Q6UXB2 119 aa6.69□□□□□ -1.34
SEC13-219ENST00000492602 TEX11Q8IYF3 940 aa6.69□□□□□ -1.34
SEC13-219ENST00000492602 KLHDC4Q8TBB5 520 aa6.69□□□□□ -1.34
SEC13-219ENST00000492602 MRPL38Q96DV4 380 aaKnown RBP6.69□□□□□ -1.34
SEC13-219ENST00000492602 ASIC4Q96FT7 647 aa6.69□□□□□ -1.34
SEC13-219ENST00000492602 CRBNQ96SW2 442 aa6.69□□□□□ -1.34
SEC13-219ENST00000492602 DHX36Q9H2U1 1008 aaKnown RBP6.69□□□□□ -1.34
SEC13-219ENST00000492602 SH2B1Q9NRF2 756 aaPredicted RBP6.69□□□□□ -1.34
SEC13-219ENST00000492602 DIS3Q9Y2L1 958 aaKnown RBP6.69□□□□□ -1.34
SEC13-219ENST00000492602 VPS13AQ96RL7 3174 aa6.69□□□□□ -1.34
SEC13-219ENST00000492602 A0A1B0GUL7 405 aa6.68□□□□□ -1.34
SEC13-219ENST00000492602 LINC01553A4QN01 128 aa6.68□□□□□ -1.34
SEC13-219ENST00000492602 F6X3S4 739 aa6.68□□□□□ -1.34
SEC13-219ENST00000492602 ADCY6O43306 1168 aa6.68□□□□□ -1.34
SEC13-219ENST00000492602 SNAI1O95863 264 aaPredicted RBP6.68□□□□□ -1.34
SEC13-219ENST00000492602 PDGFBP01127 241 aaPredicted RBP6.68□□□□□ -1.34
SEC13-219ENST00000492602 CYP2C9P11712 490 aa6.68□□□□□ -1.34
SEC13-219ENST00000492602 LTBRP36941 435 aa6.68□□□□□ -1.34
SEC13-219ENST00000492602 RAB3GAP1Q15042 981 aa6.68□□□□□ -1.34
SEC13-219ENST00000492602 BEND3Q5T5X7 828 aa6.68□□□□□ -1.34
SEC13-219ENST00000492602 RPAINQ86UA6 219 aa6.68□□□□□ -1.34
SEC13-219ENST00000492602 FOXP4Q8IVH2 680 aaPredicted RBP6.68□□□□□ -1.34
SEC13-219ENST00000492602 FBXO22Q8NEZ5 403 aa6.68□□□□□ -1.34
SEC13-219ENST00000492602 KCNG4Q8TDN1 519 aa6.68□□□□□ -1.34
SEC13-219ENST00000492602 ACER1Q8TDN7 264 aa6.68□□□□□ -1.34
SEC13-219ENST00000492602 RUNDC1Q96C34 613 aa6.68□□□□□ -1.34
SEC13-219ENST00000492602 SUCLG2Q96I99 432 aa6.68□□□□□ -1.34
SEC13-219ENST00000492602 C17orf80Q9BSJ5 609 aa6.68□□□□□ -1.34
SEC13-219ENST00000492602 TANGO6Q9C0B7 1094 aa6.68□□□□□ -1.34
SEC13-219ENST00000492602 KIAA1683Q9H0B3 1180 aa6.68□□□□□ -1.34
SEC13-219ENST00000492602 SIL1Q9H173 461 aa6.68□□□□□ -1.34
SEC13-219ENST00000492602 UPF3AQ9H1J1 476 aaKnown RBP6.68□□□□□ -1.34
SEC13-219ENST00000492602 DLL3Q9NYJ7 618 aa6.68□□□□□ -1.34
SEC13-219ENST00000492602 ANKRD11Q6UB99 2663 aaPredicted RBP6.68□□□□□ -1.34
SEC13-219ENST00000492602 EP300Q09472 2414 aaPredicted RBP6.68□□□□□ -1.34
SEC13-219ENST00000492602 MYH13Q9UKX3 1938 aa6.68□□□□□ -1.34
SEC13-219ENST00000492602 DMXL1Q9Y485 3027 aa6.67□□□□□ -1.34
SEC13-219ENST00000492602 SEMA3EO15041 775 aa6.67□□□□□ -1.34
SEC13-219ENST00000492602 CABYRO75952 493 aa6.67□□□□□ -1.34
SEC13-219ENST00000492602 BAIAP3O94812 1187 aa6.67□□□□□ -1.34
SEC13-219ENST00000492602 MAP4K4O95819 1239 aaPredicted RBP6.67□□□□□ -1.34
SEC13-219ENST00000492602 RFC2P35250 354 aa6.67□□□□□ -1.34
SEC13-219ENST00000492602 PHKA1P46020 1223 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms