RNA–Protein interactions for RNA: ENST00000492571.1

TNFRSF9-203, Transcript of TNF receptor superfamily member 9, humanhuman

TSL 3

Gene TNFRSF9, Length 584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-203ENST00000492571 DCDC2CA8MYV0 355 aa11.8□□□□□ -0.52
TNFRSF9-203ENST00000492571 SLC25A27O95847 323 aa11.8□□□□□ -0.52
TNFRSF9-203ENST00000492571 FPGSQ05932 587 aa11.8□□□□□ -0.52
TNFRSF9-203ENST00000492571 KCTD2Q14681 263 aa11.8□□□□□ -0.52
TNFRSF9-203ENST00000492571 TSR1Q2NL82 804 aaKnown RBP11.8□□□□□ -0.52
TNFRSF9-203ENST00000492571 PRAMEF19Q5SWL8 479 aa11.8□□□□□ -0.52
TNFRSF9-203ENST00000492571 IL27Q8NEV9 243 aa11.8□□□□□ -0.52
TNFRSF9-203ENST00000492571 NUP133Q8WUM0 1156 aa11.8□□□□□ -0.52
TNFRSF9-203ENST00000492571 CLUAP1Q96AJ1 413 aa11.8□□□□□ -0.52
TNFRSF9-203ENST00000492571 TRIM43Q96BQ3 446 aaPredicted RBP11.8□□□□□ -0.52
TNFRSF9-203ENST00000492571 MAML3Q96JK9 1138 aa11.8□□□□□ -0.52
TNFRSF9-203ENST00000492571 GAS2L1Q99501 681 aaPredicted RBP11.8□□□□□ -0.52
TNFRSF9-203ENST00000492571 CRNKL1Q9BZJ0 848 aaKnown RBP11.8□□□□□ -0.52
TNFRSF9-203ENST00000492571 MCM9Q9NXL9 1143 aa11.8□□□□□ -0.52
TNFRSF9-203ENST00000492571 CNPY2Q9Y2B0 182 aa11.8□□□□□ -0.52
TNFRSF9-203ENST00000492571 PLXNB2O15031 1838 aa11.79□□□□□ -0.52
TNFRSF9-203ENST00000492571 TNFRSF10AO00220 468 aa11.79□□□□□ -0.52
TNFRSF9-203ENST00000492571 PQBP1O60828 265 aaKnown RBP11.79□□□□□ -0.52
TNFRSF9-203ENST00000492571 COBLO75128 1261 aa11.79□□□□□ -0.52
TNFRSF9-203ENST00000492571 TRIM27P14373 513 aa11.79□□□□□ -0.52
TNFRSF9-203ENST00000492571 SHMT1P34896 483 aa11.79□□□□□ -0.52
TNFRSF9-203ENST00000492571 PLCD1P51178 756 aa11.79□□□□□ -0.52
TNFRSF9-203ENST00000492571 ATP8B2P98198 1209 aa11.79□□□□□ -0.52
TNFRSF9-203ENST00000492571 NBR1Q14596 966 aa11.79□□□□□ -0.52
TNFRSF9-203ENST00000492571 TTF1Q15361 905 aaPredicted RBP11.79□□□□□ -0.52
TNFRSF9-203ENST00000492571 FAM47AQ5JRC9 791 aa11.79□□□□□ -0.52
TNFRSF9-203ENST00000492571 TMEM179Q6ZVK1 233 aa11.79□□□□□ -0.52
TNFRSF9-203ENST00000492571 SH3RF1Q7Z6J0 888 aa11.79□□□□□ -0.52
TNFRSF9-203ENST00000492571 AMOTL1Q8IY63 956 aa11.79□□□□□ -0.52
TNFRSF9-203ENST00000492571 CCDC8Q9H0W5 538 aaPredicted RBP11.79□□□□□ -0.52
TNFRSF9-203ENST00000492571 SWAP70Q9UH65 585 aa11.79□□□□□ -0.52
TNFRSF9-203ENST00000492571 PHF24Q9UPV7 400 aa11.79□□□□□ -0.52
TNFRSF9-203ENST00000492571 ATAD5Q96QE3 1844 aa11.79□□□□□ -0.52
TNFRSF9-203ENST00000492571 TRIM6-TRIM34B2RNG4 842 aa11.78□□□□□ -0.52
TNFRSF9-203ENST00000492571 KIAA0355O15063 1070 aa11.78□□□□□ -0.52
TNFRSF9-203ENST00000492571 IGHA2P01877 340 aa11.78□□□□□ -0.52
TNFRSF9-203ENST00000492571 COPB2P35606 906 aa11.78□□□□□ -0.52
TNFRSF9-203ENST00000492571 CCDC129Q6ZRS4 1044 aa11.78□□□□□ -0.52
TNFRSF9-203ENST00000492571 SSH3Q8TE77 659 aa11.78□□□□□ -0.52
TNFRSF9-203ENST00000492571 TIFAQ96CG3 184 aa11.78□□□□□ -0.52
TNFRSF9-203ENST00000492571 TOX2Q96NM4 488 aa11.78□□□□□ -0.52
TNFRSF9-203ENST00000492571 MMP19Q99542 508 aa11.78□□□□□ -0.52
TNFRSF9-203ENST00000492571 ZNF576Q9H609 170 aa11.78□□□□□ -0.52
TNFRSF9-203ENST00000492571 STARD7Q9NQZ5 370 aa11.78□□□□□ -0.52
TNFRSF9-203ENST00000492571 SEPT9Q9UHD8 586 aaPredicted RBP11.78□□□□□ -0.52
TNFRSF9-203ENST00000492571 DBNLQ9UJU6 430 aaKnown RBP11.78□□□□□ -0.52
TNFRSF9-203ENST00000492571 BCAR3O75815 825 aa11.77□□□□□ -0.53
TNFRSF9-203ENST00000492571 PGK1P00558 417 aa11.77□□□□□ -0.53
TNFRSF9-203ENST00000492571 AKR1A1P14550 325 aa11.77□□□□□ -0.53
TNFRSF9-203ENST00000492571 DNAJB2P25686 324 aa11.77□□□□□ -0.53
TNFRSF9-203ENST00000492571 GRIN2CQ14957 1233 aa11.77□□□□□ -0.53
TNFRSF9-203ENST00000492571 SLC9C2Q5TAH2 1124 aa11.77□□□□□ -0.53
TNFRSF9-203ENST00000492571 ERC1Q8IUD2 1116 aa11.77□□□□□ -0.53
TNFRSF9-203ENST00000492571 SPICE1Q8N0Z3 855 aa11.77□□□□□ -0.53
TNFRSF9-203ENST00000492571 SLC44A5Q8NCS7 719 aa11.77□□□□□ -0.53
TNFRSF9-203ENST00000492571 ATXN2LQ8WWM7 1075 aaKnown RBP11.77□□□□□ -0.53
TNFRSF9-203ENST00000492571 VTI1AQ96AJ9 217 aa11.77□□□□□ -0.53
TNFRSF9-203ENST00000492571 DDRGK1Q96HY6 314 aa11.77□□□□□ -0.53
TNFRSF9-203ENST00000492571 TINF2Q9BSI4 451 aa11.77□□□□□ -0.53
TNFRSF9-203ENST00000492571 TSEN34Q9BSV6 310 aaKnown RBP11.77□□□□□ -0.53
TNFRSF9-203ENST00000492571 SPC25Q9HBM1 224 aa11.77□□□□□ -0.53
TNFRSF9-203ENST00000492571 DIS3Q9Y2L1 958 aaKnown RBP11.77□□□□□ -0.53
TNFRSF9-203ENST00000492571 A0A1W2PQ45 241 aaPredicted RBP11.76□□□□□ -0.53
TNFRSF9-203ENST00000492571 A0A1W2PQY0 241 aa11.76□□□□□ -0.53
TNFRSF9-203ENST00000492571 A0A1W2PRG0 241 aa11.76□□□□□ -0.53
TNFRSF9-203ENST00000492571 MOXD2PA6NHM9 499 aa11.76□□□□□ -0.53
TNFRSF9-203ENST00000492571 WDR46O15213 610 aaKnown RBP11.76□□□□□ -0.53
TNFRSF9-203ENST00000492571 GUCY1A2P33402 732 aa11.76□□□□□ -0.53
TNFRSF9-203ENST00000492571 ICA1Q05084 483 aa11.76□□□□□ -0.53
TNFRSF9-203ENST00000492571 ZKSCAN2Q63HK3 967 aa11.76□□□□□ -0.53
TNFRSF9-203ENST00000492571 LAPTM4BQ86VI4 370 aa11.76□□□□□ -0.53
TNFRSF9-203ENST00000492571 FTSJ3Q8IY81 847 aaKnown RBP11.76□□□□□ -0.53
TNFRSF9-203ENST00000492571 ANKK1Q8NFD2 765 aa11.76□□□□□ -0.53
TNFRSF9-203ENST00000492571 PPM1EQ8WY54 764 aa11.76□□□□□ -0.53
TNFRSF9-203ENST00000492571 EAF2Q96CJ1 260 aaPredicted RBP11.76□□□□□ -0.53
TNFRSF9-203ENST00000492571 ATG4CQ96DT6 458 aa11.76□□□□□ -0.53
TNFRSF9-203ENST00000492571 ZFRQ96KR1 1074 aaKnown RBP11.76□□□□□ -0.53
TNFRSF9-203ENST00000492571 CCDC17Q96LX7 622 aa11.76□□□□□ -0.53
TNFRSF9-203ENST00000492571 GLT1D1Q96MS3 346 aa11.76□□□□□ -0.53
TNFRSF9-203ENST00000492571 VCPKMTQ9H867 229 aa11.76□□□□□ -0.53
TNFRSF9-203ENST00000492571 FAM184BQ9ULE4 1060 aa11.76□□□□□ -0.53
TNFRSF9-203ENST00000492571 ARIH1Q9Y4X5 557 aaPredicted RBP11.76□□□□□ -0.53
TNFRSF9-203ENST00000492571 MROH7Q68CQ1 1323 aa11.76□□□□□ -0.53
TNFRSF9-203ENST00000492571 EYSQ5T1H1 3165 aa11.75□□□□□ -0.53
TNFRSF9-203ENST00000492571 MAP3K7O43318 606 aa11.75□□□□□ -0.53
TNFRSF9-203ENST00000492571 RAD21O60216 631 aa11.75□□□□□ -0.53
TNFRSF9-203ENST00000492571 TIMP1P01033 207 aa11.75□□□□□ -0.53
TNFRSF9-203ENST00000492571 STAT3P40763 770 aa11.75□□□□□ -0.53
TNFRSF9-203ENST00000492571 ACLYP53396 1101 aa11.75□□□□□ -0.53
TNFRSF9-203ENST00000492571 GABPAQ06546 454 aa11.75□□□□□ -0.53
TNFRSF9-203ENST00000492571 PPIGQ13427 754 aaKnown RBP eCLIP11.75□□□□□ -0.53
TNFRSF9-203ENST00000492571 HSP90AB4PQ58FF6 505 aa11.75□□□□□ -0.53
TNFRSF9-203ENST00000492571 ANKRD33Q7Z3H0 272 aa11.75□□□□□ -0.53
TNFRSF9-203ENST00000492571 TMEM199Q8N511 208 aa11.75□□□□□ -0.53
TNFRSF9-203ENST00000492571 MSL3Q8N5Y2 521 aaKnown RBP11.75□□□□□ -0.53
TNFRSF9-203ENST00000492571 DDX11Q96FC9 970 aa11.75□□□□□ -0.53
TNFRSF9-203ENST00000492571 RIOK1Q9BRS2 568 aaKnown RBP11.75□□□□□ -0.53
TNFRSF9-203ENST00000492571 MTIF3Q9H2K0 278 aaKnown RBP11.75□□□□□ -0.53
TNFRSF9-203ENST00000492571 ANTXR1Q9H6X2 564 aa11.75□□□□□ -0.53
TNFRSF9-203ENST00000492571 GOPCQ9HD26 462 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms