RNA–Protein interactions for RNA: ENST00000492519.1

PABPC4-217, Transcript of poly(A) binding protein cytoplasmic 4, humanhuman

TSL 2

Gene PABPC4, Length 323 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC4-217ENST00000492519 DHRS4Q9BTZ2 278 aa4.84□□□□□ -1.63
PABPC4-217ENST00000492519 IFT57Q9NWB7 429 aa4.84□□□□□ -1.63
PABPC4-217ENST00000492519 STOML1Q9UBI4 398 aa4.84□□□□□ -1.63
PABPC4-217ENST00000492519 MRPS23Q9Y3D9 190 aaKnown RBP4.84□□□□□ -1.63
PABPC4-217ENST00000492519 FHOD1Q9Y613 1164 aa4.84□□□□□ -1.63
PABPC4-217ENST00000492519 TRBV23-1A0A0A0MS06 115 aa4.83□□□□□ -1.64
PABPC4-217ENST00000492519 SHISA3A0PJX4 238 aa4.83□□□□□ -1.64
PABPC4-217ENST00000492519 MEIS1O00470 390 aa4.83□□□□□ -1.64
PABPC4-217ENST00000492519 SIGLEC6O43699 453 aa4.83□□□□□ -1.64
PABPC4-217ENST00000492519 DYRK3O43781 588 aa4.83□□□□□ -1.64
PABPC4-217ENST00000492519 VAMP4O75379 141 aa4.83□□□□□ -1.64
PABPC4-217ENST00000492519 PRAMEF1O95521 474 aa4.83□□□□□ -1.64
PABPC4-217ENST00000492519 HMGB1P09429 215 aaKnown RBP4.83□□□□□ -1.64
PABPC4-217ENST00000492519 ZNF865P0CJ78 1059 aaPredicted RBP4.83□□□□□ -1.64
PABPC4-217ENST00000492519 FGFR1P11362 822 aa4.83□□□□□ -1.64
PABPC4-217ENST00000492519 PABPC1P11940 636 aaKnown RBP4.83□□□□□ -1.64
PABPC4-217ENST00000492519 KIR3DL1P43629 444 aa4.83□□□□□ -1.64
PABPC4-217ENST00000492519 TNK2Q07912 1038 aa4.83□□□□□ -1.64
PABPC4-217ENST00000492519 SF1Q15637 639 aaKnown RBP4.83□□□□□ -1.64
PABPC4-217ENST00000492519 GTF2IRD2BQ6EKJ0 949 aa4.83□□□□□ -1.64
PABPC4-217ENST00000492519 POMZP3Q6PJE2 187 aa4.83□□□□□ -1.64
PABPC4-217ENST00000492519 ZNF765Q7L2R6 523 aa4.83□□□□□ -1.64
PABPC4-217ENST00000492519 GTF2IRD2Q86UP8 949 aa4.83□□□□□ -1.64
PABPC4-217ENST00000492519 SCUBE1Q8IWY4 988 aa4.83□□□□□ -1.64
PABPC4-217ENST00000492519 SYNPOQ8N3V7 929 aa4.83□□□□□ -1.64
PABPC4-217ENST00000492519 OSBP2Q969R2 916 aa4.83□□□□□ -1.64
PABPC4-217ENST00000492519 ZDHHC15Q96MV8 337 aa4.83□□□□□ -1.64
PABPC4-217ENST00000492519 IER2Q9BTL4 223 aa4.83□□□□□ -1.64
PABPC4-217ENST00000492519 DSCC1Q9BVC3 393 aa4.83□□□□□ -1.64
PABPC4-217ENST00000492519 NCOA5Q9HCD5 579 aaKnown RBP4.83□□□□□ -1.64
PABPC4-217ENST00000492519 CHST7Q9NS84 486 aa4.83□□□□□ -1.64
PABPC4-217ENST00000492519 PRR13Q9NZ81 148 aa4.83□□□□□ -1.64
PABPC4-217ENST00000492519 GTF2IRD1Q9UHL9 959 aa4.83□□□□□ -1.64
PABPC4-217ENST00000492519 KCNH3Q9ULD8 1083 aa4.83□□□□□ -1.64
PABPC4-217ENST00000492519 DIS3Q9Y2L1 958 aaKnown RBP4.83□□□□□ -1.64
PABPC4-217ENST00000492519 PRKAB1Q9Y478 270 aa4.83□□□□□ -1.64
PABPC4-217ENST00000492519 U3KQE9 123 aa4.83□□□□□ -1.64
PABPC4-217ENST00000492519 CECR2Q9BXF3 1484 aa4.82□□□□□ -1.64
PABPC4-217ENST00000492519 CCDC163A0A0D9SF12 145 aa4.82□□□□□ -1.64
PABPC4-217ENST00000492519 H0Y8X5 98 aa4.82□□□□□ -1.64
PABPC4-217ENST00000492519 DNAJC6O75061 913 aa4.82□□□□□ -1.64
PABPC4-217ENST00000492519 RAPGEF3O95398 923 aa4.82□□□□□ -1.64
PABPC4-217ENST00000492519 F13BP05160 661 aa4.82□□□□□ -1.64
PABPC4-217ENST00000492519 NMIQ13287 307 aaPredicted RBP4.82□□□□□ -1.64
PABPC4-217ENST00000492519 PABPC4Q13310 644 aaKnown RBP eCLIP4.82□□□□□ -1.64
PABPC4-217ENST00000492519 CYP27C1Q4G0S4 372 aa4.82□□□□□ -1.64
PABPC4-217ENST00000492519 NSMFQ6X4W1 530 aa4.82□□□□□ -1.64
PABPC4-217ENST00000492519 C22orf34Q6ZV56 151 aa4.82□□□□□ -1.64
PABPC4-217ENST00000492519 DHX37Q8IY37 1157 aaKnown RBP4.82□□□□□ -1.64
PABPC4-217ENST00000492519 ANKRD13AQ8IZ07 590 aa4.82□□□□□ -1.64
PABPC4-217ENST00000492519 MFSD4AQ8N468 514 aa4.82□□□□□ -1.64
PABPC4-217ENST00000492519 CRACR2BQ8N4Y2 399 aaPredicted RBP4.82□□□□□ -1.64
PABPC4-217ENST00000492519 CLUHP3Q96NS8 147 aa4.82□□□□□ -1.64
PABPC4-217ENST00000492519 IPO9Q96P70 1041 aaKnown RBP4.82□□□□□ -1.64
PABPC4-217ENST00000492519 SPC25Q9HBM1 224 aa4.82□□□□□ -1.64
PABPC4-217ENST00000492519 GPR55Q9Y2T6 319 aaPredicted RBP4.82□□□□□ -1.64
PABPC4-217ENST00000492519 CAPN6Q9Y6Q1 641 aa4.82□□□□□ -1.64
PABPC4-217ENST00000492519 BLACEA4D250 179 aa4.81□□□□□ -1.64
PABPC4-217ENST00000492519 IGF2BP3O00425 579 aaKnown RBP eCLIP4.81□□□□□ -1.64
PABPC4-217ENST00000492519 PLD2O14939 933 aa4.81□□□□□ -1.64
PABPC4-217ENST00000492519 DLX3O60479 287 aa4.81□□□□□ -1.64
PABPC4-217ENST00000492519 ADAM23O75077 832 aa4.81□□□□□ -1.64
PABPC4-217ENST00000492519 CTSKP43235 329 aa4.81□□□□□ -1.64
PABPC4-217ENST00000492519 MASP1P48740 699 aa4.81□□□□□ -1.64
PABPC4-217ENST00000492519 GFRA1P56159 465 aa4.81□□□□□ -1.64
PABPC4-217ENST00000492519 SUMO1P63165 101 aaKnown RBP4.81□□□□□ -1.64
PABPC4-217ENST00000492519 GRB10Q13322 594 aa4.81□□□□□ -1.64
PABPC4-217ENST00000492519 DPY19L1Q2PZI1 675 aa4.81□□□□□ -1.64
PABPC4-217ENST00000492519 RNF43Q68DV7 783 aa4.81□□□□□ -1.64
PABPC4-217ENST00000492519 NINJ1Q92982 152 aa4.81□□□□□ -1.64
PABPC4-217ENST00000492519 ASCC2Q9H1I8 757 aaPredicted RBP4.81□□□□□ -1.64
PABPC4-217ENST00000492519 SEMA6BQ9H3T3 888 aa4.81□□□□□ -1.64
PABPC4-217ENST00000492519 PLAAQ9Y263 795 aa4.81□□□□□ -1.64
PABPC4-217ENST00000492519 SF3B6Q9Y3B4 125 aaKnown RBP4.81□□□□□ -1.64
PABPC4-217ENST00000492519 COL4A3BPQ9Y5P4 624 aa4.81□□□□□ -1.64
PABPC4-217ENST00000492519 GNAT3A8MTJ3 354 aa4.8□□□□□ -1.64
PABPC4-217ENST00000492519 WASH4PA8MWX3 477 aa4.8□□□□□ -1.64
PABPC4-217ENST00000492519 IRS4O14654 1257 aaPredicted RBP4.8□□□□□ -1.64
PABPC4-217ENST00000492519 RFPL3O75679 317 aa4.8□□□□□ -1.64
PABPC4-217ENST00000492519 SNRPB2P08579 225 aaKnown RBP4.8□□□□□ -1.64
PABPC4-217ENST00000492519 C6orf222P0C671 652 aaPredicted RBP4.8□□□□□ -1.64
PABPC4-217ENST00000492519 SRFP11831 508 aa4.8□□□□□ -1.64
PABPC4-217ENST00000492519 ITIH2P19823 946 aa4.8□□□□□ -1.64
PABPC4-217ENST00000492519 HOXC12P31275 282 aa4.8□□□□□ -1.64
PABPC4-217ENST00000492519 KCNJ6P48051 423 aa4.8□□□□□ -1.64
PABPC4-217ENST00000492519 OXCT1P55809 520 aa4.8□□□□□ -1.64
PABPC4-217ENST00000492519 CYP4F3Q08477 520 aa4.8□□□□□ -1.64
PABPC4-217ENST00000492519 NFIAQ12857 509 aa4.8□□□□□ -1.64
PABPC4-217ENST00000492519 CLEC16AQ2KHT3 1053 aa4.8□□□□□ -1.64
PABPC4-217ENST00000492519 PRSS53Q2L4Q9 553 aa4.8□□□□□ -1.64
PABPC4-217ENST00000492519 FNDC3BQ53EP0 1204 aaKnown RBP4.8□□□□□ -1.64
PABPC4-217ENST00000492519 TM4SF20Q53R12 229 aa4.8□□□□□ -1.64
PABPC4-217ENST00000492519 TAF7LQ5H9L4 462 aa4.8□□□□□ -1.64
PABPC4-217ENST00000492519 DUSP27Q5VZP5 1158 aa4.8□□□□□ -1.64
PABPC4-217ENST00000492519 CRTC3Q6UUV7 619 aa4.8□□□□□ -1.64
PABPC4-217ENST00000492519 NIM1KQ8IY84 436 aa4.8□□□□□ -1.64
PABPC4-217ENST00000492519 FAM181AQ8N9Y4 354 aa4.8□□□□□ -1.64
PABPC4-217ENST00000492519 TMEM145Q8NBT3 493 aa4.8□□□□□ -1.64
PABPC4-217ENST00000492519 PIWIL2Q8TC59 973 aaKnown RBP4.8□□□□□ -1.64
PABPC4-217ENST00000492519 MCMBPQ9BTE3 642 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms