RNA–Protein interactions for RNA: ENST00000492449.5

VPS8-225, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 1 (best)

Gene VPS8, Length 2,980 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-225ENST00000492449 BEND3Q5T5X7 828 aa10.8□□□□□ -0.68
VPS8-225ENST00000492449 HIBCHQ6NVY1 386 aaPredicted RBP10.8□□□□□ -0.68
VPS8-225ENST00000492449 LRIG3Q6UXM1 1119 aa10.8□□□□□ -0.68
VPS8-225ENST00000492449 TRMT44Q8IYL2 757 aaKnown RBP10.8□□□□□ -0.68
VPS8-225ENST00000492449 AIDAQ96BJ3 306 aa10.8□□□□□ -0.68
VPS8-225ENST00000492449 LRRC2Q9BYS8 371 aa10.8□□□□□ -0.68
VPS8-225ENST00000492449 TMBIM4Q9HC24 238 aa10.8□□□□□ -0.68
VPS8-225ENST00000492449 TRIM10Q9UDY6 481 aa10.8□□□□□ -0.68
VPS8-225ENST00000492449 MST1RQ04912 1400 aa10.79□□□□□ -0.68
VPS8-225ENST00000492449 NEO1Q92859 1461 aa10.79□□□□□ -0.68
VPS8-225ENST00000492449 A1BGP04217 495 aa10.79□□□□□ -0.68
VPS8-225ENST00000492449 MARCKSP29966 332 aaPredicted RBP10.79□□□□□ -0.68
VPS8-225ENST00000492449 ABL2P42684 1182 aa10.79□□□□□ -0.68
VPS8-225ENST00000492449 LBRQ14739 615 aaKnown RBP10.79□□□□□ -0.68
VPS8-225ENST00000492449 SGSM1Q2NKQ1 1148 aa10.79□□□□□ -0.68
VPS8-225ENST00000492449 ZMYM1Q5SVZ6 1142 aa10.79□□□□□ -0.68
VPS8-225ENST00000492449 HAUS3Q68CZ6 603 aa10.79□□□□□ -0.68
VPS8-225ENST00000492449 HDAC7Q8WUI4 952 aa10.79□□□□□ -0.68
VPS8-225ENST00000492449 GDF3Q9NR23 364 aa10.79□□□□□ -0.68
VPS8-225ENST00000492449 RASSF10A6NK89 507 aa10.79□□□□□ -0.68
VPS8-225ENST00000492449 SH2B2O14492 632 aaPredicted RBP10.79□□□□□ -0.68
VPS8-225ENST00000492449 CSB-PGBD3P0DP91 1061 aa10.79□□□□□ -0.68
VPS8-225ENST00000492449 ABCD1P33897 745 aa10.79□□□□□ -0.68
VPS8-225ENST00000492449 CTCFP49711 727 aaPredicted RBP10.79□□□□□ -0.68
VPS8-225ENST00000492449 CUL4BQ13620 913 aa10.79□□□□□ -0.68
VPS8-225ENST00000492449 AMOTQ4VCS5 1084 aa10.79□□□□□ -0.68
VPS8-225ENST00000492449 AGAP11Q8TF27 550 aa10.79□□□□□ -0.68
VPS8-225ENST00000492449 LIMA1Q9UHB6 759 aaKnown RBP10.79□□□□□ -0.68
VPS8-225ENST00000492449 SNX12Q9UMY4 172 aa10.79□□□□□ -0.68
VPS8-225ENST00000492449 CCT8L1PA6NM43 557 aa10.78□□□□□ -0.68
VPS8-225ENST00000492449 KRT86O43790 486 aa10.78□□□□□ -0.68
VPS8-225ENST00000492449 KRT83P78385 493 aa10.78□□□□□ -0.68
VPS8-225ENST00000492449 LMNB2Q03252 620 aa10.78□□□□□ -0.68
VPS8-225ENST00000492449 PAK2Q13177 524 aa10.78□□□□□ -0.68
VPS8-225ENST00000492449 DIP2AQ14689 1571 aa10.78□□□□□ -0.68
VPS8-225ENST00000492449 SEPT2Q15019 361 aa10.78□□□□□ -0.68
VPS8-225ENST00000492449 GKAP1Q5VSY0 366 aaPredicted RBP10.78□□□□□ -0.68
VPS8-225ENST00000492449 KANK3Q6NY19 840 aa10.78□□□□□ -0.68
VPS8-225ENST00000492449 NME9Q86XW9 330 aa10.78□□□□□ -0.68
VPS8-225ENST00000492449 CCDC63Q8NA47 563 aa10.78□□□□□ -0.68
VPS8-225ENST00000492449 SPATA4Q8NEY3 305 aa10.78□□□□□ -0.68
VPS8-225ENST00000492449 COG3Q96JB2 828 aa10.78□□□□□ -0.68
VPS8-225ENST00000492449 CCDC43Q96MW1 224 aaKnown RBP10.78□□□□□ -0.68
VPS8-225ENST00000492449 WDR35Q9P2L0 1181 aa10.78□□□□□ -0.68
VPS8-225ENST00000492449 ZNF185O15231 689 aa10.78□□□□□ -0.68
VPS8-225ENST00000492449 VAV2P52735 878 aa10.78□□□□□ -0.68
VPS8-225ENST00000492449 CUL3Q13618 768 aa10.78□□□□□ -0.68
VPS8-225ENST00000492449 RRS1Q15050 365 aaKnown RBP10.78□□□□□ -0.68
VPS8-225ENST00000492449 PPP1R7Q15435 360 aa10.78□□□□□ -0.68
VPS8-225ENST00000492449 EZH2Q15910 746 aaKnown RBP10.78□□□□□ -0.68
VPS8-225ENST00000492449 CDC37Q16543 378 aaPredicted RBP10.78□□□□□ -0.68
VPS8-225ENST00000492449 CCDC122Q5T0U0 273 aa10.78□□□□□ -0.68
VPS8-225ENST00000492449 ARMC3Q5W041 872 aa10.78□□□□□ -0.68
VPS8-225ENST00000492449 GGT6Q6P531 493 aa10.78□□□□□ -0.68
VPS8-225ENST00000492449 MAATS1Q7Z4T9 603 aa10.78□□□□□ -0.68
VPS8-225ENST00000492449 SMCR8Q8TEV9 937 aaPredicted RBP10.78□□□□□ -0.68
VPS8-225ENST00000492449 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.78□□□□□ -0.682e-7■■■■■ 64.2
VPS8-225ENST00000492449 EAF2Q96CJ1 260 aaPredicted RBP10.78□□□□□ -0.68
VPS8-225ENST00000492449 PPANQ9NQ55 473 aaKnown RBP10.78□□□□□ -0.68
VPS8-225ENST00000492449 SYNRGQ9UMZ2 1314 aa10.78□□□□□ -0.68
VPS8-225ENST00000492449 FOXN1O15353 648 aa10.77□□□□□ -0.68
VPS8-225ENST00000492449 TRIM37O94972 964 aa10.77□□□□□ -0.68
VPS8-225ENST00000492449 IFI16Q16666 785 aaKnown RBP10.77□□□□□ -0.68
VPS8-225ENST00000492449 DNAJC7Q99615 494 aa10.77□□□□□ -0.68
VPS8-225ENST00000492449 TAF1DQ9H5J8 278 aaPredicted RBP10.77□□□□□ -0.68
VPS8-225ENST00000492449 ZRANB1Q9UGI0 708 aa10.77□□□□□ -0.68
VPS8-225ENST00000492449 ABCC12Q96J65 1359 aa10.77□□□□□ -0.68
VPS8-225ENST00000492449 RNF225M0QZC1 329 aaPredicted RBP10.77□□□□□ -0.69
VPS8-225ENST00000492449 MAFGO15525 162 aa10.77□□□□□ -0.69
VPS8-225ENST00000492449 DIAPH2O60879 1101 aa10.77□□□□□ -0.69
VPS8-225ENST00000492449 ALDH3A1P30838 453 aa10.77□□□□□ -0.69
VPS8-225ENST00000492449 DYNC1I2Q13409 638 aaKnown RBP10.77□□□□□ -0.69
VPS8-225ENST00000492449 BIRC3Q13489 604 aa10.77□□□□□ -0.69
VPS8-225ENST00000492449 ITIH4Q14624 930 aa10.77□□□□□ -0.69
VPS8-225ENST00000492449 CCDC96Q2M329 555 aa10.77□□□□□ -0.69
VPS8-225ENST00000492449 MCMDC2Q4G0Z9 681 aa10.77□□□□□ -0.69
VPS8-225ENST00000492449 TTC39AQ5SRH9 613 aa10.77□□□□□ -0.69
VPS8-225ENST00000492449 OTUD7BQ6GQQ9 843 aa10.77□□□□□ -0.69
VPS8-225ENST00000492449 IFT20Q8IY31 132 aa10.77□□□□□ -0.69
VPS8-225ENST00000492449 OSBPL1AQ9BXW6 950 aa10.77□□□□□ -0.69
VPS8-225ENST00000492449 L3MBTL1Q9Y468 752 aa10.77□□□□□ -0.69
VPS8-225ENST00000492449 ALKQ9UM73 1620 aa10.77□□□□□ -0.69
VPS8-225ENST00000492449 ORC4O43929 436 aa10.77□□□□□ -0.69
VPS8-225ENST00000492449 SMIM24O75264 130 aa10.77□□□□□ -0.69
VPS8-225ENST00000492449 DRD4P21917 467 aa10.77□□□□□ -0.69
VPS8-225ENST00000492449 LRRC23Q53EV4 343 aaPredicted RBP10.77□□□□□ -0.69
VPS8-225ENST00000492449 NUGGCQ68CJ6 796 aa10.77□□□□□ -0.69
VPS8-225ENST00000492449 EIF1ADQ8N9N8 165 aaKnown RBP10.77□□□□□ -0.69
VPS8-225ENST00000492449 WHAMMQ8TF30 809 aa10.77□□□□□ -0.69
VPS8-225ENST00000492449 SLX1AQ9BQ83 275 aa10.77□□□□□ -0.69
VPS8-225ENST00000492449 DSCC1Q9BVC3 393 aa10.77□□□□□ -0.69
VPS8-225ENST00000492449 PLCB1Q9NQ66 1216 aa10.77□□□□□ -0.69
VPS8-225ENST00000492449 RANBP1P43487 201 aa10.76□□□□□ -0.69
VPS8-225ENST00000492449 MRPS35P82673 323 aaKnown RBP10.76□□□□□ -0.69
VPS8-225ENST00000492449 CENPTQ96BT3 561 aa10.76□□□□□ -0.69
VPS8-225ENST00000492449 CHP1Q99653 195 aa10.76□□□□□ -0.69
VPS8-225ENST00000492449 BOLA2Q9H3K6 86 aa10.76□□□□□ -0.69
VPS8-225ENST00000492449 ZNF232Q9UNY5 417 aa10.76□□□□□ -0.69
VPS8-225ENST00000492449 LRRD1A4D1F6 860 aa10.76□□□□□ -0.69
VPS8-225ENST00000492449 IDEP14735 1019 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms