RNA–Protein interactions for RNA: ENST00000492348.6

RBBP4-214, Transcript of RB binding protein 4, chromatin remodeling factor, humanhuman

TSL 2

Gene RBBP4, Length 1,547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBBP4-214ENST00000492348 C7orf43Q8WVR3 580 aa8.21□□□□□ -1.1
RBBP4-214ENST00000492348 SYAP1Q96A49 352 aaPredicted RBP8.21□□□□□ -1.1
RBBP4-214ENST00000492348 SHISA4Q96DD7 197 aa8.21□□□□□ -1.1
RBBP4-214ENST00000492348 SPATA32Q96LK8 384 aa8.21□□□□□ -1.1
RBBP4-214ENST00000492348 NOL10Q9BSC4 688 aaKnown RBP8.21□□□□□ -1.1
RBBP4-214ENST00000492348 SLC26A6Q9BXS9 759 aa8.21□□□□□ -1.1
RBBP4-214ENST00000492348 SAP30BPQ9UHR5 308 aaKnown RBP8.21□□□□□ -1.1
RBBP4-214ENST00000492348 PLIN4Q96Q06 1357 aa8.2□□□□□ -1.1
RBBP4-214ENST00000492348 DDAH1O94760 285 aa8.2□□□□□ -1.1
RBBP4-214ENST00000492348 PLEKHA8P1O95397 391 aa8.2□□□□□ -1.1
RBBP4-214ENST00000492348 SLC3A2P08195 630 aaKnown RBP8.2□□□□□ -1.1
RBBP4-214ENST00000492348 IARSP41252 1262 aaKnown RBP8.2□□□□□ -1.1
RBBP4-214ENST00000492348 PLCD1P51178 756 aa8.2□□□□□ -1.1
RBBP4-214ENST00000492348 PDE4BQ07343 736 aa8.2□□□□□ -1.1
RBBP4-214ENST00000492348 TROAPQ12815 778 aa8.2□□□□□ -1.1
RBBP4-214ENST00000492348 PLA2G2CQ5R387 149 aa8.2□□□□□ -1.1
RBBP4-214ENST00000492348 IFIT1BQ5T764 474 aaKnown RBP8.2□□□□□ -1.1
RBBP4-214ENST00000492348 PDXDC2PQ6P474 469 aa8.2□□□□□ -1.1
RBBP4-214ENST00000492348 CPLX2Q6PUV4 134 aaKnown RBP8.2□□□□□ -1.1
RBBP4-214ENST00000492348 TMTC2Q8N394 836 aa8.2□□□□□ -1.1
RBBP4-214ENST00000492348 NUP133Q8WUM0 1156 aa8.2□□□□□ -1.1
RBBP4-214ENST00000492348 BAP1Q92560 729 aa8.2□□□□□ -1.1
RBBP4-214ENST00000492348 EYA3Q99504 573 aa8.2□□□□□ -1.1
RBBP4-214ENST00000492348 ZC3H12CQ9C0D7 883 aaKnown RBP8.2□□□□□ -1.1
RBBP4-214ENST00000492348 RBSNQ9H1K0 784 aa8.2□□□□□ -1.1
RBBP4-214ENST00000492348 DBNDD1Q9H9R9 158 aa8.2□□□□□ -1.1
RBBP4-214ENST00000492348 SUGT1Q9Y2Z0 365 aa8.2□□□□□ -1.1
RBBP4-214ENST00000492348 MYH7BA7E2Y1 1941 aa8.2□□□□□ -1.1
RBBP4-214ENST00000492348 WDHD1O75717 1129 aaPredicted RBP8.19□□□□□ -1.1
RBBP4-214ENST00000492348 RASA1P20936 1047 aa8.19□□□□□ -1.1
RBBP4-214ENST00000492348 SSRP1Q08945 709 aaKnown RBP8.19□□□□□ -1.1
RBBP4-214ENST00000492348 SYNE3Q6ZMZ3 975 aa8.19□□□□□ -1.1
RBBP4-214ENST00000492348 C16orf86Q6ZW13 317 aa8.19□□□□□ -1.1
RBBP4-214ENST00000492348 TMTC3Q6ZXV5 915 aa8.19□□□□□ -1.1
RBBP4-214ENST00000492348 BRAPQ7Z569 592 aa8.19□□□□□ -1.1
RBBP4-214ENST00000492348 IQCA1Q86XH1 822 aa8.19□□□□□ -1.1
RBBP4-214ENST00000492348 CMTR1Q8N1G2 835 aaKnown RBP8.19□□□□□ -1.1
RBBP4-214ENST00000492348 CRACR2BQ8N4Y2 399 aaPredicted RBP8.19□□□□□ -1.1
RBBP4-214ENST00000492348 FANCBQ8NB91 859 aa8.19□□□□□ -1.1
RBBP4-214ENST00000492348 CNKSR1Q969H4 720 aa8.19□□□□□ -1.1
RBBP4-214ENST00000492348 ZNF396Q96N95 335 aaPredicted RBP8.19□□□□□ -1.1
RBBP4-214ENST00000492348 FUCA2Q9BTY2 467 aa8.19□□□□□ -1.1
RBBP4-214ENST00000492348 DDX4Q9NQI0 724 aaKnown RBP8.19□□□□□ -1.1
RBBP4-214ENST00000492348 KCNQ5Q9NR82 932 aa8.19□□□□□ -1.1
RBBP4-214ENST00000492348 IL17RBQ9NRM6 502 aa8.19□□□□□ -1.1
RBBP4-214ENST00000492348 RCOR1Q9UKL0 485 aa8.19□□□□□ -1.1
RBBP4-214ENST00000492348 TTF2Q9UNY4 1162 aaKnown RBP8.19□□□□□ -1.1
RBBP4-214ENST00000492348 SBF1O95248 1867 aa8.19□□□□□ -1.1
RBBP4-214ENST00000492348 TSPY2A6NKD2 308 aa8.19□□□□□ -1.1
RBBP4-214ENST00000492348 F8W031 263 aaPredicted RBP8.19□□□□□ -1.1
RBBP4-214ENST00000492348 ECE2O60344 883 aa8.19□□□□□ -1.1
RBBP4-214ENST00000492348 RPIAP49247 311 aa8.19□□□□□ -1.1
RBBP4-214ENST00000492348 NASPP49321 788 aaPredicted RBP8.19□□□□□ -1.1
RBBP4-214ENST00000492348 NT5C2P49902 561 aa8.19□□□□□ -1.1
RBBP4-214ENST00000492348 CEBPZQ03701 1054 aaKnown RBP8.19□□□□□ -1.1
RBBP4-214ENST00000492348 PTK2Q05397 1052 aa8.19□□□□□ -1.1
RBBP4-214ENST00000492348 PKN1Q16512 942 aa8.19□□□□□ -1.1
RBBP4-214ENST00000492348 DACT2Q5SW24 774 aa8.19□□□□□ -1.1
RBBP4-214ENST00000492348 ATL3Q6DD88 541 aa8.19□□□□□ -1.1
RBBP4-214ENST00000492348 ANKS1AQ92625 1134 aa8.19□□□□□ -1.1
RBBP4-214ENST00000492348 RNF26Q9BY78 433 aaPredicted RBP8.19□□□□□ -1.1
RBBP4-214ENST00000492348 GOLPH3LQ9H4A5 285 aa8.19□□□□□ -1.1
RBBP4-214ENST00000492348 RTEL1Q9NZ71 1219 aa8.19□□□□□ -1.1
RBBP4-214ENST00000492348 CFAP45Q9UL16 551 aa8.19□□□□□ -1.1
RBBP4-214ENST00000492348 GPSM3Q9Y4H4 160 aa8.19□□□□□ -1.1
RBBP4-214ENST00000492348 CLIC4Q9Y696 253 aa8.19□□□□□ -1.1
RBBP4-214ENST00000492348 RBBP6Q7Z6E9 1792 aaKnown RBP8.18□□□□□ -1.1
RBBP4-214ENST00000492348 PARP14Q460N5 1801 aa8.18□□□□□ -1.1
RBBP4-214ENST00000492348 CCDC196A0A1B0GTZ2 297 aa8.18□□□□□ -1.1
RBBP4-214ENST00000492348 USP17L3A6NCW0 530 aa8.18□□□□□ -1.1
RBBP4-214ENST00000492348 USP17L4A6NCW7 530 aa8.18□□□□□ -1.1
RBBP4-214ENST00000492348 ZBBXA8MT70 800 aa8.18□□□□□ -1.1
RBBP4-214ENST00000492348 DEXIO95424 95 aa8.18□□□□□ -1.1
RBBP4-214ENST00000492348 YEATS4O95619 227 aa8.18□□□□□ -1.1
RBBP4-214ENST00000492348 MMP1P03956 469 aa8.18□□□□□ -1.1
RBBP4-214ENST00000492348 POLR3DP05423 398 aaPredicted RBP8.18□□□□□ -1.1
RBBP4-214ENST00000492348 U2AF2P26368 475 aaKnown RBP eCLIP8.18□□□□□ -1.11e-7■■□□□ 11.9
RBBP4-214ENST00000492348 SCNN1DP51172 638 aa8.18□□□□□ -1.1
RBBP4-214ENST00000492348 FKBP1AP62942 108 aaKnown RBP8.18□□□□□ -1.1
RBBP4-214ENST00000492348 TFAP4Q01664 338 aa8.18□□□□□ -1.1
RBBP4-214ENST00000492348 VAC14Q08AM6 782 aa8.18□□□□□ -1.1
RBBP4-214ENST00000492348 KIAA2012Q0VF49 1180 aa8.18□□□□□ -1.1
RBBP4-214ENST00000492348 NR1H3Q13133 447 aa8.18□□□□□ -1.1
RBBP4-214ENST00000492348 AOC3Q16853 763 aa8.18□□□□□ -1.1
RBBP4-214ENST00000492348 LINC01559Q495D7 138 aa8.18□□□□□ -1.1
RBBP4-214ENST00000492348 USP17L1Q7RTZ2 530 aa8.18□□□□□ -1.1
RBBP4-214ENST00000492348 CATIPQ7Z7H3 387 aa8.18□□□□□ -1.1
RBBP4-214ENST00000492348 TRIM22Q8IYM9 498 aa8.18□□□□□ -1.1
RBBP4-214ENST00000492348 WASF1Q92558 559 aa8.18□□□□□ -1.1
RBBP4-214ENST00000492348 TSPY26PQ9H489 355 aa8.18□□□□□ -1.1
RBBP4-214ENST00000492348 RBM28Q9NW13 759 aaKnown RBP8.18□□□□□ -1.1
RBBP4-214ENST00000492348 PCDHAC2Q9Y5I4 1007 aa8.18□□□□□ -1.1
RBBP4-214ENST00000492348 COL2A1P02458 1487 aaPredicted RBP8.17□□□□□ -1.1
RBBP4-214ENST00000492348 YDJCA8MPS7 323 aa8.17□□□□□ -1.1
RBBP4-214ENST00000492348 PRPF3O43395 683 aaKnown RBP8.17□□□□□ -1.1
RBBP4-214ENST00000492348 CALM1P0DP23 149 aa8.17□□□□□ -1.1
RBBP4-214ENST00000492348 CALM2P0DP24 149 aa8.17□□□□□ -1.1
RBBP4-214ENST00000492348 CALM3P0DP25 149 aa8.17□□□□□ -1.1
RBBP4-214ENST00000492348 YY1P25490 414 aa8.17□□□□□ -1.1
RBBP4-214ENST00000492348 CRKP46108 304 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms