RNA–Protein interactions for RNA: ENST00000491967.1

SMARCB1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 605 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-207ENST00000491967 ARRDC4Q8NCT1 418 aa9.98□□□□□ -0.81
SMARCB1-207ENST00000491967 GMCL1Q96IK5 515 aa9.98□□□□□ -0.81
SMARCB1-207ENST00000491967 TINF2Q9BSI4 451 aa9.98□□□□□ -0.81
SMARCB1-207ENST00000491967 FSD1Q9BTV5 496 aa9.98□□□□□ -0.81
SMARCB1-207ENST00000491967 IL17RBQ9NRM6 502 aa9.98□□□□□ -0.81
SMARCB1-207ENST00000491967 HELLSQ9NRZ9 838 aa9.98□□□□□ -0.81
SMARCB1-207ENST00000491967 FEM1BQ9UK73 627 aa9.98□□□□□ -0.81
SMARCB1-207ENST00000491967 ZMYND8Q9ULU4 1186 aaPredicted RBP9.98□□□□□ -0.81
SMARCB1-207ENST00000491967 MCM3APO60318 1980 aa9.97□□□□□ -0.81
SMARCB1-207ENST00000491967 ORC4O43929 436 aa9.97□□□□□ -0.81
SMARCB1-207ENST00000491967 PGK2P07205 417 aa9.97□□□□□ -0.81
SMARCB1-207ENST00000491967 FDX1P10109 184 aa9.97□□□□□ -0.81
SMARCB1-207ENST00000491967 KCTD2Q14681 263 aa9.97□□□□□ -0.81
SMARCB1-207ENST00000491967 FGD4Q96M96 766 aa9.97□□□□□ -0.81
SMARCB1-207ENST00000491967 MMP19Q99542 508 aa9.97□□□□□ -0.81
SMARCB1-207ENST00000491967 SENP6Q9GZR1 1112 aaPredicted RBP9.97□□□□□ -0.81
SMARCB1-207ENST00000491967 NAPBQ9H115 298 aa9.97□□□□□ -0.81
SMARCB1-207ENST00000491967 LTBP2Q14767 1821 aa9.96□□□□□ -0.81
SMARCB1-207ENST00000491967 SNAI1O95863 264 aaPredicted RBP9.96□□□□□ -0.82
SMARCB1-207ENST00000491967 SLC3A2P08195 630 aaKnown RBP9.96□□□□□ -0.82
SMARCB1-207ENST00000491967 SYN1P17600 705 aa9.96□□□□□ -0.82
SMARCB1-207ENST00000491967 CNGA1P29973 690 aa9.96□□□□□ -0.82
SMARCB1-207ENST00000491967 NKX3-2P78367 333 aa9.96□□□□□ -0.82
SMARCB1-207ENST00000491967 TFAP4Q01664 338 aa9.96□□□□□ -0.82
SMARCB1-207ENST00000491967 LRRC41Q15345 812 aa9.96□□□□□ -0.82
SMARCB1-207ENST00000491967 PPP4R3BQ5MIZ7 849 aa9.96□□□□□ -0.82
SMARCB1-207ENST00000491967 VPS53Q5VIR6 699 aa9.96□□□□□ -0.82
SMARCB1-207ENST00000491967 SLC39A5Q6ZMH5 540 aa9.96□□□□□ -0.82
SMARCB1-207ENST00000491967 CHST13Q8NET6 341 aa9.96□□□□□ -0.82
SMARCB1-207ENST00000491967 OSBPL3Q9H4L5 887 aa9.96□□□□□ -0.82
SMARCB1-207ENST00000491967 PHF24Q9UPV7 400 aa9.96□□□□□ -0.82
SMARCB1-207ENST00000491967 ZNF536O15090 1300 aa9.96□□□□□ -0.82
SMARCB1-207ENST00000491967 ZMYM6O95789 1325 aa9.96□□□□□ -0.82
SMARCB1-207ENST00000491967 SYNGAP1Q96PV0 1343 aa9.96□□□□□ -0.82
SMARCB1-207ENST00000491967 ZBED4O75132 1171 aa9.95□□□□□ -0.82
SMARCB1-207ENST00000491967 FGAP02671 866 aa9.95□□□□□ -0.82
SMARCB1-207ENST00000491967 TSPY3P0CV98 308 aa9.95□□□□□ -0.82
SMARCB1-207ENST00000491967 TSPY8P0CW00 308 aa9.95□□□□□ -0.82
SMARCB1-207ENST00000491967 BMP3P12645 472 aa9.95□□□□□ -0.82
SMARCB1-207ENST00000491967 TAL1P17542 331 aaPredicted RBP9.95□□□□□ -0.82
SMARCB1-207ENST00000491967 MCMDC2Q4G0Z9 681 aa9.95□□□□□ -0.82
SMARCB1-207ENST00000491967 FAM47AQ5JRC9 791 aa9.95□□□□□ -0.82
SMARCB1-207ENST00000491967 GJC2Q5T442 439 aaPredicted RBP9.95□□□□□ -0.82
SMARCB1-207ENST00000491967 SLFN13Q68D06 897 aa9.95□□□□□ -0.82
SMARCB1-207ENST00000491967 SNRNP48Q6IEG0 339 aaKnown RBP9.95□□□□□ -0.82
SMARCB1-207ENST00000491967 CCSAPQ6IQ19 270 aaPredicted RBP9.95□□□□□ -0.82
SMARCB1-207ENST00000491967 RCSD1Q6JBY9 416 aa9.95□□□□□ -0.82
SMARCB1-207ENST00000491967 CCDC129Q6ZRS4 1044 aa9.95□□□□□ -0.82
SMARCB1-207ENST00000491967 TDHQ8IZJ6 230 aa9.95□□□□□ -0.82
SMARCB1-207ENST00000491967 STK11IPQ8N1F8 1099 aa9.95□□□□□ -0.82
SMARCB1-207ENST00000491967 LRRC47Q8N1G4 583 aaKnown RBP9.95□□□□□ -0.82
SMARCB1-207ENST00000491967 STAG1Q8WVM7 1258 aa9.95□□□□□ -0.82
SMARCB1-207ENST00000491967 INCENPQ9NQS7 918 aa9.95□□□□□ -0.82
SMARCB1-207ENST00000491967 TCP11L1Q9NUJ3 509 aa9.95□□□□□ -0.82
SMARCB1-207ENST00000491967 FBXO40Q9UH90 709 aa9.95□□□□□ -0.82
SMARCB1-207ENST00000491967 A0A0D9SFI3 127 aa9.94□□□□□ -0.82
SMARCB1-207ENST00000491967 DLL1O00548 723 aa9.94□□□□□ -0.82
SMARCB1-207ENST00000491967 ADAMTS4O75173 837 aa9.94□□□□□ -0.82
SMARCB1-207ENST00000491967 IGHDP01880 384 aa9.94□□□□□ -0.82
SMARCB1-207ENST00000491967 RTP1P59025 263 aa9.94□□□□□ -0.82
SMARCB1-207ENST00000491967 NUCB1Q02818 461 aa9.94□□□□□ -0.82
SMARCB1-207ENST00000491967 CTDSPL2Q05D32 466 aa9.94□□□□□ -0.82
SMARCB1-207ENST00000491967 BTNL9Q6UXG8 535 aa9.94□□□□□ -0.82
SMARCB1-207ENST00000491967 FAM160B2Q86V87 743 aa9.94□□□□□ -0.82
SMARCB1-207ENST00000491967 PLEKHM2Q8IWE5 1019 aa9.94□□□□□ -0.82
SMARCB1-207ENST00000491967 FAM133AQ8N9E0 248 aa9.94□□□□□ -0.82
SMARCB1-207ENST00000491967 KLHDC9Q8NEP7 349 aa9.94□□□□□ -0.82
SMARCB1-207ENST00000491967 CHURC1Q8WUH1 139 aa9.94□□□□□ -0.82
SMARCB1-207ENST00000491967 LRCH3Q96II8 777 aa9.94□□□□□ -0.82
SMARCB1-207ENST00000491967 FAM227BQ96M60 508 aa9.94□□□□□ -0.82
SMARCB1-207ENST00000491967 TSEN34Q9BSV6 310 aaKnown RBP9.94□□□□□ -0.82
SMARCB1-207ENST00000491967 KATNBL1Q9H079 304 aa9.94□□□□□ -0.82
SMARCB1-207ENST00000491967 RWDD1Q9H446 243 aaPredicted RBP9.94□□□□□ -0.82
SMARCB1-207ENST00000491967 RAVER2Q9HCJ3 691 aaKnown RBP9.94□□□□□ -0.82
SMARCB1-207ENST00000491967 TMEM232C9JQI7 657 aa9.93□□□□□ -0.82
SMARCB1-207ENST00000491967 KBTBD13C9JR72 458 aa9.93□□□□□ -0.82
SMARCB1-207ENST00000491967 RAD21O60216 631 aa9.93□□□□□ -0.82
SMARCB1-207ENST00000491967 NMT2O60551 498 aa9.93□□□□□ -0.82
SMARCB1-207ENST00000491967 HSPD1P10809 573 aaKnown RBP9.93□□□□□ -0.82
SMARCB1-207ENST00000491967 RARBP10826 455 aa9.93□□□□□ -0.82
SMARCB1-207ENST00000491967 PCP11498 1178 aaKnown RBP9.93□□□□□ -0.82
SMARCB1-207ENST00000491967 AKR1A1P14550 325 aa9.93□□□□□ -0.82
SMARCB1-207ENST00000491967 CST5P28325 142 aaPredicted RBP9.93□□□□□ -0.82
SMARCB1-207ENST00000491967 ADCYAP1R1P41586 468 aa9.93□□□□□ -0.82
SMARCB1-207ENST00000491967 SLC1A4P43007 532 aa9.93□□□□□ -0.82
SMARCB1-207ENST00000491967 STAT2P52630 851 aa9.93□□□□□ -0.82
SMARCB1-207ENST00000491967 ATN1P54259 1190 aaPredicted RBP9.93□□□□□ -0.82
SMARCB1-207ENST00000491967 TKFCQ3LXA3 575 aa9.93□□□□□ -0.82
SMARCB1-207ENST00000491967 ANO1Q5XXA6 986 aa9.93□□□□□ -0.82
SMARCB1-207ENST00000491967 SAMD1Q6SPF0 538 aaPredicted RBP9.93□□□□□ -0.82
SMARCB1-207ENST00000491967 CPXCR1Q8N123 301 aa9.93□□□□□ -0.82
SMARCB1-207ENST00000491967 KIFC2Q96AC6 838 aa9.93□□□□□ -0.82
SMARCB1-207ENST00000491967 DDX11Q96FC9 970 aa9.93□□□□□ -0.82
SMARCB1-207ENST00000491967 UBE2OQ9C0C9 1292 aaKnown RBP9.93□□□□□ -0.82
SMARCB1-207ENST00000491967 XPNPEP3Q9NQH7 507 aa9.93□□□□□ -0.82
SMARCB1-207ENST00000491967 LCTP09848 1927 aa9.93□□□□□ -0.82
SMARCB1-207ENST00000491967 TSPY2A6NKD2 308 aa9.92□□□□□ -0.82
SMARCB1-207ENST00000491967 POTEB2H3BUK9 544 aa9.92□□□□□ -0.82
SMARCB1-207ENST00000491967 ADCY6O43306 1168 aa9.92□□□□□ -0.82
SMARCB1-207ENST00000491967 DUSP11O75319 330 aaKnown RBP9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 97.2 ms