RNA–Protein interactions for RNA: ENST00000491747.6

BRCA1-219, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 2,379 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-219ENST00000491747 MCM2P49736 904 aa10.97□□□□□ -0.65
BRCA1-219ENST00000491747 IFFO2Q5TF58 517 aa10.97□□□□□ -0.65
BRCA1-219ENST00000491747 SLFN13Q68D06 897 aa10.97□□□□□ -0.65
BRCA1-219ENST00000491747 PDLIM2Q96JY6 352 aa10.97□□□□□ -0.65
BRCA1-219ENST00000491747 TMEM47Q9BQJ4 181 aa10.97□□□□□ -0.65
BRCA1-219ENST00000491747 HOXC10Q9NYD6 342 aa10.97□□□□□ -0.65
BRCA1-219ENST00000491747 NOL7Q9UMY1 257 aaKnown RBP10.97□□□□□ -0.65
BRCA1-219ENST00000491747 ADAMTS5Q9UNA0 930 aa10.97□□□□□ -0.65
BRCA1-219ENST00000491747 MYPNQ86TC9 1320 aa10.97□□□□□ -0.65
BRCA1-219ENST00000491747 CCDC85CA6NKD9 419 aa10.96□□□□□ -0.65
BRCA1-219ENST00000491747 TNPO2O14787 897 aaKnown RBP10.96□□□□□ -0.65
BRCA1-219ENST00000491747 MBD3O95983 291 aa10.96□□□□□ -0.65
BRCA1-219ENST00000491747 COL9A3Q14050 684 aaPredicted RBP10.96□□□□□ -0.65
BRCA1-219ENST00000491747 ARHGEF6Q15052 776 aa10.96□□□□□ -0.65
BRCA1-219ENST00000491747 CYB5R4Q7L1T6 521 aa10.96□□□□□ -0.65
BRCA1-219ENST00000491747 GTF3C2Q8WUA4 911 aaPredicted RBP10.96□□□□□ -0.65
BRCA1-219ENST00000491747 ESR2Q92731 530 aa10.96□□□□□ -0.65
BRCA1-219ENST00000491747 PDCL3Q9H2J4 239 aa10.96□□□□□ -0.65
BRCA1-219ENST00000491747 GJD2Q9UKL4 321 aa10.96□□□□□ -0.65
BRCA1-219ENST00000491747 SYNPO2Q9UMS6 1093 aa10.96□□□□□ -0.65
BRCA1-219ENST00000491747 ZNFX1Q9P2E3 1918 aaKnown RBP10.96□□□□□ -0.65
BRCA1-219ENST00000491747 MCCP23508 829 aa10.96□□□□□ -0.66
BRCA1-219ENST00000491747 RBSNQ9H1K0 784 aa10.96□□□□□ -0.66
BRCA1-219ENST00000491747 PPP1R9AQ9ULJ8 1098 aa10.96□□□□□ -0.66
BRCA1-219ENST00000491747 MTMR7Q9Y216 660 aa10.96□□□□□ -0.66
BRCA1-219ENST00000491747 E7EWF7 191 aa10.95□□□□□ -0.66
BRCA1-219ENST00000491747 ZNF500O60304 480 aaPredicted RBP10.95□□□□□ -0.66
BRCA1-219ENST00000491747 FLT3LGP49771 235 aa10.95□□□□□ -0.66
BRCA1-219ENST00000491747 TMEM132BQ14DG7 1078 aa10.95□□□□□ -0.66
BRCA1-219ENST00000491747 NECTIN1Q15223 517 aa10.95□□□□□ -0.66
BRCA1-219ENST00000491747 LRSAM1Q6UWE0 723 aa10.95□□□□□ -0.66
BRCA1-219ENST00000491747 REPS2Q8NFH8 660 aa10.95□□□□□ -0.66
BRCA1-219ENST00000491747 GPT2Q8TD30 523 aa10.95□□□□□ -0.66
BRCA1-219ENST00000491747 SH3TC2Q8TF17 1288 aa10.95□□□□□ -0.66
BRCA1-219ENST00000491747 ANO2Q9NQ90 1003 aa10.95□□□□□ -0.66
BRCA1-219ENST00000491747 VWA5AO00534 786 aa10.95□□□□□ -0.66
BRCA1-219ENST00000491747 TOP1P11387 765 aaKnown RBP10.95□□□□□ -0.66
BRCA1-219ENST00000491747 BMP3P12645 472 aa10.95□□□□□ -0.66
BRCA1-219ENST00000491747 HOXD10P28358 340 aa10.95□□□□□ -0.66
BRCA1-219ENST00000491747 MCM5P33992 734 aa10.95□□□□□ -0.66
BRCA1-219ENST00000491747 PRMT2P55345 433 aa10.95□□□□□ -0.66
BRCA1-219ENST00000491747 KCTD1Q719H9 257 aa10.95□□□□□ -0.66
BRCA1-219ENST00000491747 GPR142Q7Z601 462 aa10.95□□□□□ -0.66
BRCA1-219ENST00000491747 GMCL1Q96IK5 515 aa10.95□□□□□ -0.66
BRCA1-219ENST00000491747 MOV10L1Q9BXT6 1211 aaKnown RBP10.95□□□□□ -0.66
BRCA1-219ENST00000491747 KRT23Q9C075 422 aa10.95□□□□□ -0.66
BRCA1-219ENST00000491747 SMCHD1A6NHR9 2005 aa10.94□□□□□ -0.66
BRCA1-219ENST00000491747 SLC27A2O14975 620 aa10.94□□□□□ -0.66
BRCA1-219ENST00000491747 COA7Q96BR5 231 aa10.94□□□□□ -0.66
BRCA1-219ENST00000491747 TTC14Q96N46 770 aa10.94□□□□□ -0.66
BRCA1-219ENST00000491747 ZSCAN10Q96SZ4 725 aaPredicted RBP10.94□□□□□ -0.66
BRCA1-219ENST00000491747 SLF1Q9BQI6 1058 aa10.94□□□□□ -0.66
BRCA1-219ENST00000491747 SPATC1LQ9H0A9 340 aa10.94□□□□□ -0.66
BRCA1-219ENST00000491747 ZDHHC9Q9Y397 364 aa10.94□□□□□ -0.66
BRCA1-219ENST00000491747 TMEM232C9JQI7 657 aa10.94□□□□□ -0.66
BRCA1-219ENST00000491747 MAPK4P31152 587 aa10.94□□□□□ -0.66
BRCA1-219ENST00000491747 PPP4R3BQ5MIZ7 849 aa10.94□□□□□ -0.66
BRCA1-219ENST00000491747 TTBK2Q6IQ55 1244 aa10.94□□□□□ -0.66
BRCA1-219ENST00000491747 ENAHQ8N8S7 591 aaPredicted RBP10.94□□□□□ -0.66
BRCA1-219ENST00000491747 RAET1EQ8TD07 263 aa10.94□□□□□ -0.66
BRCA1-219ENST00000491747 KIFC2Q96AC6 838 aa10.94□□□□□ -0.66
BRCA1-219ENST00000491747 CNNM2Q9H8M5 875 aa10.94□□□□□ -0.66
BRCA1-219ENST00000491747 ZNF214Q9UL59 606 aaPredicted RBP10.94□□□□□ -0.66
BRCA1-219ENST00000491747 TNKSO95271 1327 aa10.93□□□□□ -0.66
BRCA1-219ENST00000491747 ELNP15502 786 aa10.93□□□□□ -0.66
BRCA1-219ENST00000491747 SLC1A4P43007 532 aa10.93□□□□□ -0.66
BRCA1-219ENST00000491747 NEK4P51957 841 aa10.93□□□□□ -0.66
BRCA1-219ENST00000491747 PLS1Q14651 629 aa10.93□□□□□ -0.66
BRCA1-219ENST00000491747 SEC23AQ15436 765 aa10.93□□□□□ -0.66
BRCA1-219ENST00000491747 CSPP1Q1MSJ5 1256 aa10.93□□□□□ -0.66
BRCA1-219ENST00000491747 SLC9C1Q4G0N8 1177 aa10.93□□□□□ -0.66
BRCA1-219ENST00000491747 MORN1Q5T089 497 aa10.93□□□□□ -0.66
BRCA1-219ENST00000491747 CREB3L3Q68CJ9 461 aa10.93□□□□□ -0.66
BRCA1-219ENST00000491747 CHST3Q7LGC8 479 aa10.93□□□□□ -0.66
BRCA1-219ENST00000491747 PLEKHH3Q7Z736 793 aa10.93□□□□□ -0.66
BRCA1-219ENST00000491747 DGKHQ86XP1 1220 aa10.93□□□□□ -0.66
BRCA1-219ENST00000491747 MB21D1Q8N884 522 aa10.93□□□□□ -0.66
BRCA1-219ENST00000491747 PRPF38AQ8NAV1 312 aaKnown RBP10.93□□□□□ -0.66
BRCA1-219ENST00000491747 ANKS1AQ92625 1134 aa10.93□□□□□ -0.66
BRCA1-219ENST00000491747 USP6NLQ92738 828 aa10.93□□□□□ -0.66
BRCA1-219ENST00000491747 ARMC5Q96C12 935 aa10.93□□□□□ -0.66
BRCA1-219ENST00000491747 SENP2Q9HC62 589 aa10.93□□□□□ -0.66
BRCA1-219ENST00000491747 FEM1BQ9UK73 627 aa10.93□□□□□ -0.66
BRCA1-219ENST00000491747 ZKSCAN5Q9Y2L8 839 aa10.93□□□□□ -0.66
BRCA1-219ENST00000491747 RBBP6Q7Z6E9 1792 aaKnown RBP10.93□□□□□ -0.66
BRCA1-219ENST00000491747 FRMPD2Q68DX3 1309 aaPredicted RBP10.93□□□□□ -0.66
BRCA1-219ENST00000491747 PDHBP11177 359 aa10.92□□□□□ -0.66
BRCA1-219ENST00000491747 ERCC3P19447 782 aa10.92□□□□□ -0.66
BRCA1-219ENST00000491747 ANTXR2P58335 489 aa10.92□□□□□ -0.66
BRCA1-219ENST00000491747 SNAP25P60880 206 aa10.92□□□□□ -0.66
BRCA1-219ENST00000491747 IRF5Q13568 498 aa10.92□□□□□ -0.66
BRCA1-219ENST00000491747 IQCA1Q86XH1 822 aa10.92□□□□□ -0.66
BRCA1-219ENST00000491747 MB21D2Q8IYB1 491 aaPredicted RBP10.92□□□□□ -0.66
BRCA1-219ENST00000491747 TMX3Q96JJ7 454 aa10.92□□□□□ -0.66
BRCA1-219ENST00000491747 ZNF333Q96JL9 665 aa10.92□□□□□ -0.66
BRCA1-219ENST00000491747 TMEM63CQ9P1W3 806 aa10.92□□□□□ -0.66
BRCA1-219ENST00000491747 RIPK3Q9Y572 518 aa10.92□□□□□ -0.66
BRCA1-219ENST00000491747 ZNF236Q9UL36 1845 aa10.92□□□□□ -0.66
BRCA1-219ENST00000491747 SYCE3A1L190 88 aa10.92□□□□□ -0.66
BRCA1-219ENST00000491747 ADCY3O60266 1144 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms