RNA–Protein interactions for RNA: ENST00000491629.5

USF1-206, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 933 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-206ENST00000491629 GRXCR1A8MXD5 290 aa15.96■□□□□ 0.15
USF1-206ENST00000491629 TIMP1P01033 207 aa15.96■□□□□ 0.15
USF1-206ENST00000491629 PBX2P40425 430 aa15.96■□□□□ 0.15
USF1-206ENST00000491629 KCNA10Q16322 511 aa15.96■□□□□ 0.15
USF1-206ENST00000491629 RASIP1Q5U651 963 aa15.96■□□□□ 0.15
USF1-206ENST00000491629 SIRT2Q8IXJ6 389 aa15.96■□□□□ 0.15
USF1-206ENST00000491629 PANK1Q8TE04 598 aa15.96■□□□□ 0.15
USF1-206ENST00000491629 CCDC17Q96LX7 622 aa15.96■□□□□ 0.15
USF1-206ENST00000491629 FGD4Q96M96 766 aa15.96■□□□□ 0.15
USF1-206ENST00000491629 NUP88Q99567 741 aaPredicted RBP15.96■□□□□ 0.15
USF1-206ENST00000491629 TSEN34Q9BSV6 310 aaKnown RBP15.96■□□□□ 0.15
USF1-206ENST00000491629 SH2D4AQ9H788 454 aa15.96■□□□□ 0.15
USF1-206ENST00000491629 LRRC37A2A6NM11 1700 aa15.96■□□□□ 0.15
USF1-206ENST00000491629 DNAJC25-GNG10A0A024R161 153 aa15.95■□□□□ 0.14
USF1-206ENST00000491629 APBB1O00213 710 aa15.95■□□□□ 0.14
USF1-206ENST00000491629 CDK7P50613 346 aa15.95■□□□□ 0.14
USF1-206ENST00000491629 KCTD2Q14681 263 aa15.95■□□□□ 0.14
USF1-206ENST00000491629 TMEM240Q5SV17 173 aa15.95■□□□□ 0.14
USF1-206ENST00000491629 CTR9Q6PD62 1173 aa15.95■□□□□ 0.14
USF1-206ENST00000491629 MAMDC4Q6UXC1 1216 aa15.95■□□□□ 0.14
USF1-206ENST00000491629 STARD7Q9NQZ5 370 aa15.95■□□□□ 0.14
USF1-206ENST00000491629 TJAP1Q5JTD0 557 aa15.94■□□□□ 0.14
USF1-206ENST00000491629 SYMPKQ92797 1274 aaKnown RBP15.94■□□□□ 0.14
USF1-206ENST00000491629 PBX4Q9BYU1 374 aa15.94■□□□□ 0.14
USF1-206ENST00000491629 KANSL2Q9H9L4 492 aa15.94■□□□□ 0.14
USF1-206ENST00000491629 PAG1Q9NWQ8 432 aa15.94■□□□□ 0.14
USF1-206ENST00000491629 RAPGEFL1Q9UHV5 662 aa15.94■□□□□ 0.14
USF1-206ENST00000491629 SYNGAP1Q96PV0 1343 aa15.94■□□□□ 0.14
USF1-206ENST00000491629 MOXD2PA6NHM9 499 aa15.93■□□□□ 0.14
USF1-206ENST00000491629 DCDC2CA8MYV0 355 aa15.93■□□□□ 0.14
USF1-206ENST00000491629 CTAGE5O15320 804 aa15.93■□□□□ 0.14
USF1-206ENST00000491629 MFSD5Q6N075 450 aa15.93■□□□□ 0.14
USF1-206ENST00000491629 TIFAQ96CG3 184 aa15.93■□□□□ 0.14
USF1-206ENST00000491629 PUS7LQ9H0K6 701 aaKnown RBP15.93■□□□□ 0.14
USF1-206ENST00000491629 BOLA2Q9H3K6 86 aa15.93■□□□□ 0.14
USF1-206ENST00000491629 CNPY2Q9Y2B0 182 aa15.93■□□□□ 0.14
USF1-206ENST00000491629 SCN5AQ14524 2016 aa15.92■□□□□ 0.14
USF1-206ENST00000491629 DUSP11O75319 330 aaKnown RBP15.92■□□□□ 0.14
USF1-206ENST00000491629 CSF2RAP15509 400 aa15.92■□□□□ 0.14
USF1-206ENST00000491629 CST5P28325 142 aaPredicted RBP15.92■□□□□ 0.14
USF1-206ENST00000491629 ADGRE1Q14246 886 aa15.92■□□□□ 0.14
USF1-206ENST00000491629 SNRNP48Q6IEG0 339 aaKnown RBP15.92■□□□□ 0.14
USF1-206ENST00000491629 CLASRPQ8N2M8 674 aaKnown RBP15.92■□□□□ 0.14
USF1-206ENST00000491629 MSL3Q8N5Y2 521 aaKnown RBP15.92■□□□□ 0.14
USF1-206ENST00000491629 KIF1BPQ96EK5 621 aa15.92■□□□□ 0.14
USF1-206ENST00000491629 UPF3AQ9H1J1 476 aaKnown RBP15.92■□□□□ 0.14
USF1-206ENST00000491629 PRDM12Q9H4Q4 367 aa15.92■□□□□ 0.14
USF1-206ENST00000491629 GOPCQ9HD26 462 aa15.92■□□□□ 0.14
USF1-206ENST00000491629 FAM184BQ9ULE4 1060 aa15.92■□□□□ 0.14
USF1-206ENST00000491629 TNFRSF10AO00220 468 aa15.91■□□□□ 0.14
USF1-206ENST00000491629 RAD21O60216 631 aa15.91■□□□□ 0.14
USF1-206ENST00000491629 ASGR1P07306 291 aa15.91■□□□□ 0.14
USF1-206ENST00000491629 IFIT2P09913 472 aaKnown RBP15.91■□□□□ 0.14
USF1-206ENST00000491629 ACRP10323 421 aa15.91■□□□□ 0.14
USF1-206ENST00000491629 ATP5JP18859 108 aa15.91■□□□□ 0.14
USF1-206ENST00000491629 RASA1P20936 1047 aa15.91■□□□□ 0.14
USF1-206ENST00000491629 HSP90AB4PQ58FF6 505 aa15.91■□□□□ 0.14
USF1-206ENST00000491629 ZNF365Q70YC5 407 aa15.91■□□□□ 0.14
USF1-206ENST00000491629 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.91■□□□□ 0.14
USF1-206ENST00000491629 NUP133Q8WUM0 1156 aa15.91■□□□□ 0.14
USF1-206ENST00000491629 HAUS7Q99871 368 aa15.91■□□□□ 0.14
USF1-206ENST00000491629 SLF1Q9BQI6 1058 aa15.91■□□□□ 0.14
USF1-206ENST00000491629 TEX13BQ9BXU2 312 aa15.91■□□□□ 0.14
USF1-206ENST00000491629 KATNBL1Q9H079 304 aa15.91■□□□□ 0.14
USF1-206ENST00000491629 BCL11AQ9H165 835 aa15.91■□□□□ 0.14
USF1-206ENST00000491629 ZHX1Q9UKY1 873 aaPredicted RBP15.91■□□□□ 0.14
USF1-206ENST00000491629 SLC4A4Q9Y6R1 1079 aa15.91■□□□□ 0.14
USF1-206ENST00000491629 ELP1O95163 1332 aa15.91■□□□□ 0.14
USF1-206ENST00000491629 PRRC2BQ5JSZ5 2229 aaKnown RBP15.9■□□□□ 0.14
USF1-206ENST00000491629 ATP2A1O14983 1001 aa15.9■□□□□ 0.14
USF1-206ENST00000491629 NDUFB10O96000 172 aa15.9■□□□□ 0.14
USF1-206ENST00000491629 COL9A1P20849 921 aa15.9■□□□□ 0.14
USF1-206ENST00000491629 COPB2P35606 906 aa15.9■□□□□ 0.14
USF1-206ENST00000491629 ACVR2BQ13705 512 aa15.9■□□□□ 0.14
USF1-206ENST00000491629 UBE3CQ15386 1083 aa15.9■□□□□ 0.14
USF1-206ENST00000491629 CCDC144BQ3MJ40 725 aa15.9■□□□□ 0.14
USF1-206ENST00000491629 FAM126BQ8IXS8 530 aa15.9■□□□□ 0.14
USF1-206ENST00000491629 PPM1EQ8WY54 764 aa15.9■□□□□ 0.14
USF1-206ENST00000491629 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.9■□□□□ 0.14
USF1-206ENST00000491629 CXXC1Q9P0U4 656 aaPredicted RBP15.9■□□□□ 0.14
USF1-206ENST00000491629 ASTN1O14525 1302 aa15.9■□□□□ 0.14
USF1-206ENST00000491629 IGKV6D-41A0A0C4DH26 115 aa15.89■□□□□ 0.13
USF1-206ENST00000491629 F5H6K3 240 aa15.89■□□□□ 0.13
USF1-206ENST00000491629 ARVCFO00192 962 aa15.89■□□□□ 0.13
USF1-206ENST00000491629 CD4P01730 458 aa15.89■□□□□ 0.13
USF1-206ENST00000491629 C6orf222P0C671 652 aaPredicted RBP15.89■□□□□ 0.13
USF1-206ENST00000491629 PTGS1P23219 599 aa15.89■□□□□ 0.13
USF1-206ENST00000491629 GJA9P57773 515 aa15.89■□□□□ 0.13
USF1-206ENST00000491629 KLRC3Q07444 240 aa15.89■□□□□ 0.13
USF1-206ENST00000491629 PPIGQ13427 754 aaKnown RBP eCLIP15.89■□□□□ 0.133e-6■■■□□ 17.3
USF1-206ENST00000491629 ZNF467Q7Z7K2 595 aaPredicted RBP15.89■□□□□ 0.13
USF1-206ENST00000491629 PPP1R12CQ9BZL4 782 aa15.89■□□□□ 0.13
USF1-206ENST00000491629 RAVER2Q9HCJ3 691 aaKnown RBP15.89■□□□□ 0.13
USF1-206ENST00000491629 NYAP2Q9P242 653 aa15.89■□□□□ 0.13
USF1-206ENST00000491629 UMODL1Q5DID0 1318 aa15.89■□□□□ 0.13
USF1-206ENST00000491629 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.88■□□□□ 0.13
USF1-206ENST00000491629 GSG1L2A8MUP6 293 aa15.88■□□□□ 0.13
USF1-206ENST00000491629 CYP2C18P33260 490 aa15.88■□□□□ 0.13
USF1-206ENST00000491629 AKNAD1Q5T1N1 836 aa15.88■□□□□ 0.13
USF1-206ENST00000491629 CPXCR1Q8N123 301 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms