RNA–Protein interactions for RNA: ENST00000491552.1

MSH5-SAPCD1-206, Transcript of MSH5-SAPCD1 readthrough (NMD candidate), humanhuman

TSL 3

Gene MSH5-SAPCD1, Length 706 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-SAPCD1-206ENST00000491552 NUDT12Q9BQG2 462 aa19.08■□□□□ 0.64
MSH5-SAPCD1-206ENST00000491552 SLC38A10Q9HBR0 1119 aa19.08■□□□□ 0.64
MSH5-SAPCD1-206ENST00000491552 GPCPD1Q9NPB8 672 aa19.08■□□□□ 0.64
MSH5-SAPCD1-206ENST00000491552 GJD2Q9UKL4 321 aa19.08■□□□□ 0.64
MSH5-SAPCD1-206ENST00000491552 IVNS1ABPQ9Y6Y0 642 aa19.08■□□□□ 0.64
MSH5-SAPCD1-206ENST00000491552 PLXNB2O15031 1838 aa19.08■□□□□ 0.64
MSH5-SAPCD1-206ENST00000491552 ZKSCAN1P17029 563 aaPredicted RBP19.07■□□□□ 0.64
MSH5-SAPCD1-206ENST00000491552 MCM5P33992 734 aa19.07■□□□□ 0.64
MSH5-SAPCD1-206ENST00000491552 COPB2P35606 906 aa19.07■□□□□ 0.64
MSH5-SAPCD1-206ENST00000491552 STAT3P40763 770 aa19.07■□□□□ 0.64
MSH5-SAPCD1-206ENST00000491552 WTAPQ15007 396 aa19.07■□□□□ 0.64
MSH5-SAPCD1-206ENST00000491552 TSGA10IPQ3SY00 556 aa19.07■□□□□ 0.64
MSH5-SAPCD1-206ENST00000491552 TMEM67Q5HYA8 995 aa19.07■□□□□ 0.64
MSH5-SAPCD1-206ENST00000491552 MORN1Q5T089 497 aa19.07■□□□□ 0.64
MSH5-SAPCD1-206ENST00000491552 GPATCH4Q5T3I0 446 aaKnown RBP19.07■□□□□ 0.64
MSH5-SAPCD1-206ENST00000491552 TTBK2Q6IQ55 1244 aa19.07■□□□□ 0.64
MSH5-SAPCD1-206ENST00000491552 BTNL9Q6UXG8 535 aa19.07■□□□□ 0.64
MSH5-SAPCD1-206ENST00000491552 NCAPG2Q86XI2 1143 aa19.07■□□□□ 0.64
MSH5-SAPCD1-206ENST00000491552 RIOX2Q8IUF8 465 aa19.07■□□□□ 0.64
MSH5-SAPCD1-206ENST00000491552 SLAIN1Q8ND83 568 aa19.07■□□□□ 0.64
MSH5-SAPCD1-206ENST00000491552 ARMC5Q96C12 935 aa19.07■□□□□ 0.64
MSH5-SAPCD1-206ENST00000491552 MTA3Q9BTC8 594 aa19.07■□□□□ 0.64
MSH5-SAPCD1-206ENST00000491552 TEX13BQ9BXU2 312 aa19.07■□□□□ 0.64
MSH5-SAPCD1-206ENST00000491552 MROH8Q9H579 483 aa19.07■□□□□ 0.64
MSH5-SAPCD1-206ENST00000491552 PRR12Q9ULL5 1215 aa19.07■□□□□ 0.64
MSH5-SAPCD1-206ENST00000491552 SLC15A5A6NIM6 579 aa19.06■□□□□ 0.64
MSH5-SAPCD1-206ENST00000491552 CCDC85CA6NKD9 419 aa19.06■□□□□ 0.64
MSH5-SAPCD1-206ENST00000491552 ATP2A1O14983 1001 aa19.06■□□□□ 0.64
MSH5-SAPCD1-206ENST00000491552 EPB41L2O43491 1005 aaKnown RBP19.06■□□□□ 0.64
MSH5-SAPCD1-206ENST00000491552 PRC1O43663 620 aa19.06■□□□□ 0.64
MSH5-SAPCD1-206ENST00000491552 ADCY3O60266 1144 aa19.06■□□□□ 0.64
MSH5-SAPCD1-206ENST00000491552 PTPREP23469 700 aa19.06■□□□□ 0.64
MSH5-SAPCD1-206ENST00000491552 GRK4P32298 578 aa19.06■□□□□ 0.64
MSH5-SAPCD1-206ENST00000491552 HSPA4P34932 840 aa19.06■□□□□ 0.64
MSH5-SAPCD1-206ENST00000491552 KRT32Q14532 448 aa19.06■□□□□ 0.64
MSH5-SAPCD1-206ENST00000491552 SNRNP48Q6IEG0 339 aaKnown RBP19.06■□□□□ 0.64
MSH5-SAPCD1-206ENST00000491552 NBPF11Q86T75 865 aa19.06■□□□□ 0.64
MSH5-SAPCD1-206ENST00000491552 RASEFQ8IZ41 740 aa19.06■□□□□ 0.64
MSH5-SAPCD1-206ENST00000491552 SH3TC2Q8TF17 1288 aa19.06■□□□□ 0.64
MSH5-SAPCD1-206ENST00000491552 RAVER2Q9HCJ3 691 aaKnown RBP19.06■□□□□ 0.64
MSH5-SAPCD1-206ENST00000491552 ZNF236Q9UL36 1845 aa19.05■□□□□ 0.64
MSH5-SAPCD1-206ENST00000491552 SLC16A2P36021 539 aa19.05■□□□□ 0.64
MSH5-SAPCD1-206ENST00000491552 RGS2P41220 211 aa19.05■□□□□ 0.64
MSH5-SAPCD1-206ENST00000491552 OAZ1P54368 228 aa19.05■□□□□ 0.64
MSH5-SAPCD1-206ENST00000491552 GRB14Q14449 540 aa19.05■□□□□ 0.64
MSH5-SAPCD1-206ENST00000491552 ASPRV1Q53RT3 343 aa19.05■□□□□ 0.64
MSH5-SAPCD1-206ENST00000491552 SYDE2Q5VT97 1194 aa19.05■□□□□ 0.64
MSH5-SAPCD1-206ENST00000491552 CPXCR1Q8N123 301 aa19.05■□□□□ 0.64
MSH5-SAPCD1-206ENST00000491552 IGDCC4Q8TDY8 1250 aa19.05■□□□□ 0.64
MSH5-SAPCD1-206ENST00000491552 PXYLP1Q8TE99 480 aa19.05■□□□□ 0.64
MSH5-SAPCD1-206ENST00000491552 USP6NLQ92738 828 aa19.05■□□□□ 0.64
MSH5-SAPCD1-206ENST00000491552 KCNB2Q92953 911 aa19.05■□□□□ 0.64
MSH5-SAPCD1-206ENST00000491552 TMEM87BQ96K49 555 aa19.05■□□□□ 0.64
MSH5-SAPCD1-206ENST00000491552 DOCK3Q8IZD9 2030 aa19.05■□□□□ 0.64
MSH5-SAPCD1-206ENST00000491552 STRNO43815 780 aa19.04■□□□□ 0.64
MSH5-SAPCD1-206ENST00000491552 CYP2B6P20813 491 aa19.04■□□□□ 0.64
MSH5-SAPCD1-206ENST00000491552 MAP2K5Q13163 448 aa19.04■□□□□ 0.64
MSH5-SAPCD1-206ENST00000491552 COL9A3Q14050 684 aaPredicted RBP19.04■□□□□ 0.64
MSH5-SAPCD1-206ENST00000491552 ZNF333Q96JL9 665 aa19.04■□□□□ 0.64
MSH5-SAPCD1-206ENST00000491552 NEK1Q96PY6 1258 aa19.04■□□□□ 0.64
MSH5-SAPCD1-206ENST00000491552 APBA2Q99767 749 aa19.04■□□□□ 0.64
MSH5-SAPCD1-206ENST00000491552 SENP2Q9HC62 589 aa19.04■□□□□ 0.64
MSH5-SAPCD1-206ENST00000491552 CAPN15O75808 1086 aa19.03■□□□□ 0.64
MSH5-SAPCD1-206ENST00000491552 PARP1P09874 1014 aaKnown RBP19.03■□□□□ 0.64
MSH5-SAPCD1-206ENST00000491552 GOLGA8HP0CJ92 632 aa19.03■□□□□ 0.64
MSH5-SAPCD1-206ENST00000491552 XRCC5P13010 732 aaKnown RBP19.03■□□□□ 0.64
MSH5-SAPCD1-206ENST00000491552 ELNP15502 786 aa19.03■□□□□ 0.64
MSH5-SAPCD1-206ENST00000491552 SNAP25P60880 206 aa19.03■□□□□ 0.64
MSH5-SAPCD1-206ENST00000491552 ADCK5Q3MIX3 580 aa19.03■□□□□ 0.64
MSH5-SAPCD1-206ENST00000491552 ABRAQ8N0Z2 381 aa19.03■□□□□ 0.64
MSH5-SAPCD1-206ENST00000491552 RANBP17Q9H2T7 1088 aaKnown RBP19.03■□□□□ 0.64
MSH5-SAPCD1-206ENST00000491552 LY9Q9HBG7 655 aa19.03■□□□□ 0.64
MSH5-SAPCD1-206ENST00000491552 ZNF536O15090 1300 aa19.02■□□□□ 0.64
MSH5-SAPCD1-206ENST00000491552 SH2B2O14492 632 aaPredicted RBP19.02■□□□□ 0.64
MSH5-SAPCD1-206ENST00000491552 FCER1AP12319 257 aa19.02■□□□□ 0.64
MSH5-SAPCD1-206ENST00000491552 ADORA2AP29274 412 aa19.02■□□□□ 0.64
MSH5-SAPCD1-206ENST00000491552 SLC4A3P48751 1232 aa19.02■□□□□ 0.64
MSH5-SAPCD1-206ENST00000491552 UBXN2AP68543 259 aa19.02■□□□□ 0.64
MSH5-SAPCD1-206ENST00000491552 CCDC174Q6PII3 467 aa19.02■□□□□ 0.64
MSH5-SAPCD1-206ENST00000491552 CATIPQ7Z7H3 387 aa19.02■□□□□ 0.64
MSH5-SAPCD1-206ENST00000491552 MMP19Q99542 508 aa19.02■□□□□ 0.64
MSH5-SAPCD1-206ENST00000491552 USP26Q9BXU7 913 aa19.02■□□□□ 0.64
MSH5-SAPCD1-206ENST00000491552 BIN2Q9UBW5 565 aaPredicted RBP19.02■□□□□ 0.64
MSH5-SAPCD1-206ENST00000491552 RIPK3Q9Y572 518 aa19.02■□□□□ 0.64
MSH5-SAPCD1-206ENST00000491552 SNX14Q9Y5W7 946 aa19.02■□□□□ 0.64
MSH5-SAPCD1-206ENST00000491552 WDR19Q8NEZ3 1342 aa19.01■□□□□ 0.63
MSH5-SAPCD1-206ENST00000491552 HMGCRP04035 888 aa19.01■□□□□ 0.63
MSH5-SAPCD1-206ENST00000491552 HMGB1P09429 215 aaKnown RBP19.01■□□□□ 0.63
MSH5-SAPCD1-206ENST00000491552 IFFO2Q5TF58 517 aa19.01■□□□□ 0.63
MSH5-SAPCD1-206ENST00000491552 TRMT44Q8IYL2 757 aaKnown RBP19.01■□□□□ 0.63
MSH5-SAPCD1-206ENST00000491552 TMTC2Q8N394 836 aa19.01■□□□□ 0.63
MSH5-SAPCD1-206ENST00000491552 CHST13Q8NET6 341 aa19.01■□□□□ 0.63
MSH5-SAPCD1-206ENST00000491552 AGBL1Q96MI9 1066 aa19.01■□□□□ 0.63
MSH5-SAPCD1-206ENST00000491552 LRRC2Q9BYS8 371 aa19.01■□□□□ 0.63
MSH5-SAPCD1-206ENST00000491552 UBA5Q9GZZ9 404 aa19.01■□□□□ 0.63
MSH5-SAPCD1-206ENST00000491552 GPHNQ9NQX3 736 aaPredicted RBP19.01■□□□□ 0.63
MSH5-SAPCD1-206ENST00000491552 HTTP42858 3142 aa19■□□□□ 0.63
MSH5-SAPCD1-206ENST00000491552 CCDC69A6NI79 296 aa19■□□□□ 0.63
MSH5-SAPCD1-206ENST00000491552 INHAP05111 366 aa19■□□□□ 0.63
MSH5-SAPCD1-206ENST00000491552 ICAM1P05362 532 aa19■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms