RNA–Protein interactions for RNA: ENST00000491421.5

LSM2-213, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM2, Length 820 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-213ENST00000491421 ZBED4O75132 1171 aa9.8□□□□□ -0.84
LSM2-213ENST00000491421 IGHDP01880 384 aa9.8□□□□□ -0.84
LSM2-213ENST00000491421 NUCB1Q02818 461 aa9.8□□□□□ -0.84
LSM2-213ENST00000491421 NMIQ13287 307 aaPredicted RBP9.8□□□□□ -0.84
LSM2-213ENST00000491421 MCMDC2Q4G0Z9 681 aa9.8□□□□□ -0.84
LSM2-213ENST00000491421 SLFN13Q68D06 897 aa9.8□□□□□ -0.84
LSM2-213ENST00000491421 RILPL2Q969X0 211 aa9.8□□□□□ -0.84
LSM2-213ENST00000491421 ANAPC4Q9UJX5 808 aa9.8□□□□□ -0.84
LSM2-213ENST00000491421 ZMYND8Q9ULU4 1186 aaPredicted RBP9.8□□□□□ -0.84
LSM2-213ENST00000491421 STX8Q9UNK0 236 aa9.8□□□□□ -0.84
LSM2-213ENST00000491421 RLFQ13129 1914 aa9.8□□□□□ -0.84
LSM2-213ENST00000491421 GREB1LQ9C091 1923 aaPredicted RBP9.8□□□□□ -0.84
LSM2-213ENST00000491421 DNM1LO00429 736 aa9.79□□□□□ -0.84
LSM2-213ENST00000491421 ATP2A1O14983 1001 aa9.79□□□□□ -0.84
LSM2-213ENST00000491421 SEPT4O43236 478 aa9.79□□□□□ -0.84
LSM2-213ENST00000491421 RANBP6O60518 1105 aaKnown RBP9.79□□□□□ -0.84
LSM2-213ENST00000491421 BMP3P12645 472 aa9.79□□□□□ -0.84
LSM2-213ENST00000491421 SYN1P17600 705 aa9.79□□□□□ -0.84
LSM2-213ENST00000491421 SLC1A4P43007 532 aa9.79□□□□□ -0.84
LSM2-213ENST00000491421 SLC4A3P48751 1232 aa9.79□□□□□ -0.84
LSM2-213ENST00000491421 IKQ13123 557 aaPredicted RBP9.79□□□□□ -0.84
LSM2-213ENST00000491421 ALX1Q15699 326 aa9.79□□□□□ -0.84
LSM2-213ENST00000491421 ZNF792Q3KQV3 632 aa9.79□□□□□ -0.84
LSM2-213ENST00000491421 PRAMEF19Q5SWL8 479 aa9.79□□□□□ -0.84
LSM2-213ENST00000491421 ANO1Q5XXA6 986 aa9.79□□□□□ -0.84
LSM2-213ENST00000491421 CPXCR1Q8N123 301 aa9.79□□□□□ -0.84
LSM2-213ENST00000491421 ARRDC4Q8NCT1 418 aa9.79□□□□□ -0.84
LSM2-213ENST00000491421 GMCL1Q96IK5 515 aa9.79□□□□□ -0.84
LSM2-213ENST00000491421 SENP6Q9GZR1 1112 aaPredicted RBP9.79□□□□□ -0.84
LSM2-213ENST00000491421 PRO3102Q9H379 93 aa9.79□□□□□ -0.84
LSM2-213ENST00000491421 RAVER2Q9HCJ3 691 aaKnown RBP9.79□□□□□ -0.84
LSM2-213ENST00000491421 INCENPQ9NQS7 918 aa9.79□□□□□ -0.84
LSM2-213ENST00000491421 TOMM22Q9NS69 142 aa9.79□□□□□ -0.84
LSM2-213ENST00000491421 FOXD4L1Q9NU39 408 aa9.79□□□□□ -0.84
LSM2-213ENST00000491421 NRBP1Q9UHY1 535 aa9.79□□□□□ -0.84
LSM2-213ENST00000491421 DIS3Q9Y2L1 958 aaKnown RBP9.79□□□□□ -0.84
LSM2-213ENST00000491421 TMEM232C9JQI7 657 aa9.78□□□□□ -0.84
LSM2-213ENST00000491421 KBTBD13C9JR72 458 aa9.78□□□□□ -0.84
LSM2-213ENST00000491421 ORC4O43929 436 aa9.78□□□□□ -0.84
LSM2-213ENST00000491421 NMT2O60551 498 aa9.78□□□□□ -0.84
LSM2-213ENST00000491421 FGAP02671 866 aa9.78□□□□□ -0.84
LSM2-213ENST00000491421 MYCNP04198 464 aaPredicted RBP9.78□□□□□ -0.84
LSM2-213ENST00000491421 MCCP23508 829 aa9.78□□□□□ -0.84
LSM2-213ENST00000491421 STAT2P52630 851 aa9.78□□□□□ -0.84
LSM2-213ENST00000491421 LRRC26Q2I0M4 334 aa9.78□□□□□ -0.84
LSM2-213ENST00000491421 GJC2Q5T442 439 aaPredicted RBP9.78□□□□□ -0.84
LSM2-213ENST00000491421 ZNF589Q86UQ0 364 aaPredicted RBP9.78□□□□□ -0.84
LSM2-213ENST00000491421 PLEKHM2Q8IWE5 1019 aa9.78□□□□□ -0.84
LSM2-213ENST00000491421 CHMP4CQ96CF2 233 aa9.78□□□□□ -0.84
LSM2-213ENST00000491421 DDX11Q96FC9 970 aa9.78□□□□□ -0.84
LSM2-213ENST00000491421 TINF2Q9BSI4 451 aa9.78□□□□□ -0.84
LSM2-213ENST00000491421 SLC38A10Q9HBR0 1119 aa9.78□□□□□ -0.84
LSM2-213ENST00000491421 IL17RBQ9NRM6 502 aa9.78□□□□□ -0.84
LSM2-213ENST00000491421 FBXO40Q9UH90 709 aa9.78□□□□□ -0.84
LSM2-213ENST00000491421 CNPY2Q9Y2B0 182 aa9.78□□□□□ -0.84
LSM2-213ENST00000491421 RIPK3Q9Y572 518 aa9.78□□□□□ -0.84
LSM2-213ENST00000491421 TACC3Q9Y6A5 838 aa9.78□□□□□ -0.84
LSM2-213ENST00000491421 CCDC171Q6TFL3 1326 aa9.78□□□□□ -0.84
LSM2-213ENST00000491421 TRIOBPQ9H2D6 2365 aa9.78□□□□□ -0.84
LSM2-213ENST00000491421 A0A1W2PPC1 479 aa9.77□□□□□ -0.85
LSM2-213ENST00000491421 FDX1P10109 184 aa9.77□□□□□ -0.85
LSM2-213ENST00000491421 HSPD1P10809 573 aaKnown RBP9.77□□□□□ -0.85
LSM2-213ENST00000491421 SDSP20132 328 aa9.77□□□□□ -0.85
LSM2-213ENST00000491421 ATN1P54259 1190 aaPredicted RBP9.77□□□□□ -0.85
LSM2-213ENST00000491421 OAZ1P54368 228 aa9.77□□□□□ -0.85
LSM2-213ENST00000491421 MFAP1P55081 439 aaKnown RBP9.77□□□□□ -0.85
LSM2-213ENST00000491421 RRP12Q5JTH9 1297 aaKnown RBP9.77□□□□□ -0.85
LSM2-213ENST00000491421 FAM160B2Q86V87 743 aa9.77□□□□□ -0.85
LSM2-213ENST00000491421 CHST13Q8NET6 341 aa9.77□□□□□ -0.85
LSM2-213ENST00000491421 CHURC1Q8WUH1 139 aa9.77□□□□□ -0.85
LSM2-213ENST00000491421 STAG1Q8WVM7 1258 aa9.77□□□□□ -0.85
LSM2-213ENST00000491421 GDF15Q99988 308 aa9.77□□□□□ -0.85
LSM2-213ENST00000491421 OSBPL3Q9H4L5 887 aa9.77□□□□□ -0.85
LSM2-213ENST00000491421 HOMER2Q9NSB8 354 aa9.77□□□□□ -0.85
LSM2-213ENST00000491421 DIAPH3Q9NSV4 1193 aa9.77□□□□□ -0.85
LSM2-213ENST00000491421 PCDH10Q9P2E7 1040 aa9.77□□□□□ -0.85
LSM2-213ENST00000491421 SUPT16HQ9Y5B9 1047 aaKnown RBP9.77□□□□□ -0.85
LSM2-213ENST00000491421 ZMYM6O95789 1325 aa9.77□□□□□ -0.85
LSM2-213ENST00000491421 DNAJC25-GNG10A0A024R161 153 aa9.76□□□□□ -0.85
LSM2-213ENST00000491421 FGRP09769 529 aa9.76□□□□□ -0.85
LSM2-213ENST00000491421 RARBP10826 455 aa9.76□□□□□ -0.85
LSM2-213ENST00000491421 TAL1P17542 331 aaPredicted RBP9.76□□□□□ -0.85
LSM2-213ENST00000491421 MAGEA10P43363 369 aaPredicted RBP9.76□□□□□ -0.85
LSM2-213ENST00000491421 HAND2P61296 217 aa9.76□□□□□ -0.85
LSM2-213ENST00000491421 LRRC41Q15345 812 aa9.76□□□□□ -0.85
LSM2-213ENST00000491421 CCDC96Q2M329 555 aa9.76□□□□□ -0.85
LSM2-213ENST00000491421 RCSD1Q6JBY9 416 aa9.76□□□□□ -0.85
LSM2-213ENST00000491421 KCTD1Q719H9 257 aa9.76□□□□□ -0.85
LSM2-213ENST00000491421 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.76□□□□□ -0.85
LSM2-213ENST00000491421 ANKRD35Q8N283 1001 aa9.76□□□□□ -0.85
LSM2-213ENST00000491421 MSL3Q8N5Y2 521 aaKnown RBP9.76□□□□□ -0.85
LSM2-213ENST00000491421 XPNPEP3Q9NQH7 507 aa9.76□□□□□ -0.85
LSM2-213ENST00000491421 MTMR7Q9Y216 660 aa9.76□□□□□ -0.85
LSM2-213ENST00000491421 SYNGAP1Q96PV0 1343 aa9.76□□□□□ -0.85
LSM2-213ENST00000491421 PARP14Q460N5 1801 aa9.75□□□□□ -0.85
LSM2-213ENST00000491421 HIP1O00291 1037 aa9.75□□□□□ -0.85
LSM2-213ENST00000491421 PLA2G6O60733 806 aa9.75□□□□□ -0.85
LSM2-213ENST00000491421 ZNF865P0CJ78 1059 aaPredicted RBP9.75□□□□□ -0.85
LSM2-213ENST00000491421 PCP11498 1178 aaKnown RBP9.75□□□□□ -0.85
LSM2-213ENST00000491421 AKR1A1P14550 325 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms