RNA–Protein interactions for RNA: ENST00000491360.1

ABCB1-208, Transcript of ATP binding cassette subfamily B member 1, humanhuman

TSL 2

Gene ABCB1, Length 539 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCB1-208ENST00000491360 SLC12A5Q9H2X9 1139 aa5.86□□□□□ -1.47
ABCB1-208ENST00000491360 CWC22Q9HCG8 908 aaKnown RBP5.86□□□□□ -1.47
ABCB1-208ENST00000491360 SSU72Q9NP77 194 aaKnown RBP5.86□□□□□ -1.47
ABCB1-208ENST00000491360 GTF2IRD1Q9UHL9 959 aa5.86□□□□□ -1.47
ABCB1-208ENST00000491360 ZKSCAN5Q9Y2L8 839 aa5.86□□□□□ -1.47
ABCB1-208ENST00000491360 MYO5BQ9ULV0 1848 aa5.85□□□□□ -1.47
ABCB1-208ENST00000491360 PIK3C2BO00750 1634 aa5.85□□□□□ -1.47
ABCB1-208ENST00000491360 LRRC7Q96NW7 1537 aa5.85□□□□□ -1.47
ABCB1-208ENST00000491360 ZFYVE9O95405 1425 aa5.85□□□□□ -1.47
ABCB1-208ENST00000491360 EVC2Q86UK5 1308 aa5.85□□□□□ -1.47
ABCB1-208ENST00000491360 NPIPB6E9PJ23 425 aa5.85□□□□□ -1.47
ABCB1-208ENST00000491360 IGF2BP3O00425 579 aaKnown RBP eCLIP5.85□□□□□ -1.47
ABCB1-208ENST00000491360 KRT1P04264 644 aa5.85□□□□□ -1.47
ABCB1-208ENST00000491360 NCLP19338 710 aaKnown RBP5.85□□□□□ -1.47
ABCB1-208ENST00000491360 ITPKAP23677 461 aa5.85□□□□□ -1.47
ABCB1-208ENST00000491360 RBM10P98175 930 aaKnown RBP5.85□□□□□ -1.47
ABCB1-208ENST00000491360 PTPN12Q05209 780 aaKnown RBP5.85□□□□□ -1.47
ABCB1-208ENST00000491360 TTLL4Q14679 1199 aa5.85□□□□□ -1.47
ABCB1-208ENST00000491360 KIF4BQ2VIQ3 1234 aa5.85□□□□□ -1.47
ABCB1-208ENST00000491360 ANKRD45Q5TZF3 282 aa5.85□□□□□ -1.47
ABCB1-208ENST00000491360 CIAPIN1Q6FI81 312 aa5.85□□□□□ -1.47
ABCB1-208ENST00000491360 CAVIN1Q6NZI2 390 aaKnown RBP5.85□□□□□ -1.47
ABCB1-208ENST00000491360 WDR89Q96FK6 387 aaPredicted RBP5.85□□□□□ -1.47
ABCB1-208ENST00000491360 CCDC86Q9H6F5 360 aaKnown RBP5.85□□□□□ -1.47
ABCB1-208ENST00000491360 LMBRD1Q9NUN5 540 aa5.85□□□□□ -1.47
ABCB1-208ENST00000491360 PRDM4Q9UKN5 801 aa5.85□□□□□ -1.47
ABCB1-208ENST00000491360 CACNA1FO60840 1977 aa5.84□□□□□ -1.47
ABCB1-208ENST00000491360 KIF24Q5T7B8 1368 aa5.84□□□□□ -1.47
ABCB1-208ENST00000491360 RPS26P11Q5JNZ5 115 aaPredicted RBP5.84□□□□□ -1.47
ABCB1-208ENST00000491360 LRSAM1Q6UWE0 723 aa5.84□□□□□ -1.47
ABCB1-208ENST00000491360 GJD3Q8N144 294 aa5.84□□□□□ -1.47
ABCB1-208ENST00000491360 TOP6BLQ8N6T0 577 aa5.84□□□□□ -1.47
ABCB1-208ENST00000491360 ARHGAP45Q92619 1136 aa5.84□□□□□ -1.47
ABCB1-208ENST00000491360 KRT82Q9NSB4 513 aa5.84□□□□□ -1.47
ABCB1-208ENST00000491360 TRAK1Q9UPV9 953 aa5.84□□□□□ -1.47
ABCB1-208ENST00000491360 ERCC6L2Q5T890 1561 aa5.84□□□□□ -1.48
ABCB1-208ENST00000491360 HECW2Q9P2P5 1572 aa5.84□□□□□ -1.48
ABCB1-208ENST00000491360 RPGRIP1LQ68CZ1 1315 aa5.83□□□□□ -1.48
ABCB1-208ENST00000491360 U2SURPO15042 1029 aaKnown RBP5.83□□□□□ -1.48
ABCB1-208ENST00000491360 KIF3BO15066 747 aa5.83□□□□□ -1.48
ABCB1-208ENST00000491360 MBD3O95983 291 aa5.83□□□□□ -1.48
ABCB1-208ENST00000491360 HCLS1P14317 486 aaPredicted RBP5.83□□□□□ -1.48
ABCB1-208ENST00000491360 XPCQ01831 940 aaPredicted RBP5.83□□□□□ -1.48
ABCB1-208ENST00000491360 KCNA10Q16322 511 aa5.83□□□□□ -1.48
ABCB1-208ENST00000491360 INTS3Q68E01 1043 aaKnown RBP5.83□□□□□ -1.48
ABCB1-208ENST00000491360 PHF6Q8IWS0 365 aaKnown RBP eCLIP5.83□□□□□ -1.48
ABCB1-208ENST00000491360 HEXIM2Q96MH2 286 aaKnown RBP5.83□□□□□ -1.48
ABCB1-208ENST00000491360 EHD4Q9H223 541 aa5.83□□□□□ -1.48
ABCB1-208ENST00000491360 C14orf93Q9H972 538 aaKnown RBP5.83□□□□□ -1.48
ABCB1-208ENST00000491360 FAM135BQ49AJ0 1406 aa5.82□□□□□ -1.48
ABCB1-208ENST00000491360 ASXL2Q76L83 1435 aa5.82□□□□□ -1.48
ABCB1-208ENST00000491360 SIGLEC1Q9BZZ2 1709 aa5.82□□□□□ -1.48
ABCB1-208ENST00000491360 ABCC4O15439 1325 aa5.82□□□□□ -1.48
ABCB1-208ENST00000491360 ZNF862O60290 1169 aa5.82□□□□□ -1.48
ABCB1-208ENST00000491360 FZD6O60353 706 aa5.82□□□□□ -1.48
ABCB1-208ENST00000491360 PRPF40AO75400 957 aaKnown RBP5.82□□□□□ -1.48
ABCB1-208ENST00000491360 TTC22Q5TAA0 569 aa5.82□□□□□ -1.48
ABCB1-208ENST00000491360 UTP14CQ5TAP6 766 aaKnown RBP5.82□□□□□ -1.48
ABCB1-208ENST00000491360 CASC1Q6TDU7 716 aa5.82□□□□□ -1.48
ABCB1-208ENST00000491360 SPACA3Q8IXA5 215 aa5.82□□□□□ -1.48
ABCB1-208ENST00000491360 GPT2Q8TD30 523 aa5.82□□□□□ -1.48
ABCB1-208ENST00000491360 SYAP1Q96A49 352 aaPredicted RBP5.82□□□□□ -1.48
ABCB1-208ENST00000491360 ZC3H12CQ9C0D7 883 aaKnown RBP5.82□□□□□ -1.48
ABCB1-208ENST00000491360 NSUN3Q9H649 340 aaKnown RBP5.82□□□□□ -1.48
ABCB1-208ENST00000491360 PCDHGC5Q9Y5F6 944 aa5.82□□□□□ -1.48
ABCB1-208ENST00000491360 NEXMIFQ5QGS0 1516 aa5.82□□□□□ -1.48
ABCB1-208ENST00000491360 N4BP2Q86UW6 1770 aaPredicted RBP5.81□□□□□ -1.48
ABCB1-208ENST00000491360 DIAPH1O60610 1272 aaKnown RBP5.81□□□□□ -1.48
ABCB1-208ENST00000491360 PTMAP06454 111 aaKnown RBP5.81□□□□□ -1.48
ABCB1-208ENST00000491360 GSPT1P15170 499 aaKnown RBP5.81□□□□□ -1.48
ABCB1-208ENST00000491360 GDNFP39905 211 aa5.81□□□□□ -1.48
ABCB1-208ENST00000491360 CLCN7P51798 805 aa5.81□□□□□ -1.48
ABCB1-208ENST00000491360 KIAA2012Q0VF49 1180 aa5.81□□□□□ -1.48
ABCB1-208ENST00000491360 MTMR3Q13615 1198 aa5.81□□□□□ -1.48
ABCB1-208ENST00000491360 FAM214BQ7L5A3 538 aa5.81□□□□□ -1.48
ABCB1-208ENST00000491360 MYRIPQ8NFW9 859 aa5.81□□□□□ -1.48
ABCB1-208ENST00000491360 ISL2Q96A47 359 aa5.81□□□□□ -1.48
ABCB1-208ENST00000491360 CCDC120Q96HB5 630 aa5.81□□□□□ -1.48
ABCB1-208ENST00000491360 DIRC2Q96SL1 478 aa5.81□□□□□ -1.48
ABCB1-208ENST00000491360 CCDC94Q9BW85 323 aaPredicted RBP5.81□□□□□ -1.48
ABCB1-208ENST00000491360 API5Q9BZZ5 524 aaKnown RBP5.81□□□□□ -1.48
ABCB1-208ENST00000491360 TSPY26PQ9H489 355 aa5.81□□□□□ -1.48
ABCB1-208ENST00000491360 CD320Q9NPF0 282 aa5.81□□□□□ -1.48
ABCB1-208ENST00000491360 ITSN1Q15811 1721 aa5.81□□□□□ -1.48
ABCB1-208ENST00000491360 A0A1W2PP64 1363 aa5.8□□□□□ -1.48
ABCB1-208ENST00000491360 PNPLA6Q8IY17 1366 aa5.8□□□□□ -1.48
ABCB1-208ENST00000491360 TCAF2A6NFQ2 919 aa5.8□□□□□ -1.48
ABCB1-208ENST00000491360 GNAT3A8MTJ3 354 aa5.8□□□□□ -1.48
ABCB1-208ENST00000491360 REC8O95072 547 aa5.8□□□□□ -1.48
ABCB1-208ENST00000491360 GSTP1P09211 210 aaKnown RBP5.8□□□□□ -1.48
ABCB1-208ENST00000491360 MCM2P49736 904 aa5.8□□□□□ -1.48
ABCB1-208ENST00000491360 GNAI1P63096 354 aa5.8□□□□□ -1.48
ABCB1-208ENST00000491360 HMGN5P82970 282 aaKnown RBP5.8□□□□□ -1.48
ABCB1-208ENST00000491360 DMTNQ08495 405 aa5.8□□□□□ -1.48
ABCB1-208ENST00000491360 SF3B2Q13435 895 aaKnown RBP5.8□□□□□ -1.48
ABCB1-208ENST00000491360 ATG14Q6ZNE5 492 aa5.8□□□□□ -1.48
ABCB1-208ENST00000491360 AFAP1Q8N556 730 aa5.8□□□□□ -1.48
ABCB1-208ENST00000491360 RELTQ969Z4 430 aa5.8□□□□□ -1.48
ABCB1-208ENST00000491360 PBXIP1Q96AQ6 731 aa5.8□□□□□ -1.48
ABCB1-208ENST00000491360 C1orf115Q9H7X2 142 aa5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms