RNA–Protein interactions for RNA: ENST00000491349.5

RNF38-209, Transcript of ring finger protein 38, humanhuman

TSL 5

Gene RNF38, Length 959 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-209ENST00000491349 GCLCP48506 637 aaPredicted RBP9.67□□□□□ -0.86
RNF38-209ENST00000491349 RBM25P49756 843 aaKnown RBP9.67□□□□□ -0.86
RNF38-209ENST00000491349 NEK4P51957 841 aa9.67□□□□□ -0.86
RNF38-209ENST00000491349 COG2Q14746 738 aa9.67□□□□□ -0.86
RNF38-209ENST00000491349 Q6ZUG5 572 aa9.67□□□□□ -0.86
RNF38-209ENST00000491349 STOX1Q6ZVD7 989 aa9.67□□□□□ -0.86
RNF38-209ENST00000491349 SPICE1Q8N0Z3 855 aa9.67□□□□□ -0.86
RNF38-209ENST00000491349 NUP133Q8WUM0 1156 aa9.67□□□□□ -0.86
RNF38-209ENST00000491349 LZTS2Q9BRK4 669 aa9.67□□□□□ -0.86
RNF38-209ENST00000491349 RBM28Q9NW13 759 aaKnown RBP9.67□□□□□ -0.86
RNF38-209ENST00000491349 SAGE1Q9NXZ1 904 aa9.67□□□□□ -0.86
RNF38-209ENST00000491349 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.67□□□□□ -0.86
RNF38-209ENST00000491349 BTBD19C9JJ37 291 aa9.66□□□□□ -0.86
RNF38-209ENST00000491349 SH2B2O14492 632 aaPredicted RBP9.66□□□□□ -0.86
RNF38-209ENST00000491349 ZBTB43O43298 467 aa9.66□□□□□ -0.86
RNF38-209ENST00000491349 NDUFB10O96000 172 aa9.66□□□□□ -0.86
RNF38-209ENST00000491349 COPB2P35606 906 aa9.66□□□□□ -0.86
RNF38-209ENST00000491349 MCM2P49736 904 aa9.66□□□□□ -0.86
RNF38-209ENST00000491349 RCAN1P53805 252 aa9.66□□□□□ -0.86
RNF38-209ENST00000491349 CCNA1P78396 465 aa9.66□□□□□ -0.86
RNF38-209ENST00000491349 JAG1P78504 1218 aa9.66□□□□□ -0.86
RNF38-209ENST00000491349 AKAP17AQ02040 695 aaKnown RBP9.66□□□□□ -0.86
RNF38-209ENST00000491349 SHROOM1Q2M3G4 852 aaPredicted RBP9.66□□□□□ -0.86
RNF38-209ENST00000491349 ADCK5Q3MIX3 580 aa9.66□□□□□ -0.86
RNF38-209ENST00000491349 FAM83BQ5T0W9 1011 aa9.66□□□□□ -0.86
RNF38-209ENST00000491349 CLEC10AQ8IUN9 316 aa9.66□□□□□ -0.86
RNF38-209ENST00000491349 ZNF654Q8IZM8 581 aa9.66□□□□□ -0.86
RNF38-209ENST00000491349 MB21D1Q8N884 522 aa9.66□□□□□ -0.86
RNF38-209ENST00000491349 PRPF38AQ8NAV1 312 aaKnown RBP9.66□□□□□ -0.86
RNF38-209ENST00000491349 BRI3BPQ8WY22 251 aa9.66□□□□□ -0.86
RNF38-209ENST00000491349 MAP3K14Q99558 947 aa9.66□□□□□ -0.86
RNF38-209ENST00000491349 SLF1Q9BQI6 1058 aa9.66□□□□□ -0.86
RNF38-209ENST00000491349 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.66□□□□□ -0.86
RNF38-209ENST00000491349 EMILIN3Q9NT22 766 aa9.66□□□□□ -0.86
RNF38-209ENST00000491349 THSD7BQ9C0I4 1608 aa9.66□□□□□ -0.86
RNF38-209ENST00000491349 KLF18A0A0U1RQI7 1052 aa9.65□□□□□ -0.86
RNF38-209ENST00000491349 A0A1W2PRG0 241 aa9.65□□□□□ -0.86
RNF38-209ENST00000491349 TMEM232C9JQI7 657 aa9.65□□□□□ -0.86
RNF38-209ENST00000491349 CPLX1O14810 134 aa9.65□□□□□ -0.86
RNF38-209ENST00000491349 PLA2G6O60733 806 aa9.65□□□□□ -0.86
RNF38-209ENST00000491349 NOVP48745 357 aa9.65□□□□□ -0.86
RNF38-209ENST00000491349 EMP3P54852 163 aa9.65□□□□□ -0.86
RNF38-209ENST00000491349 EXOSC10Q01780 885 aaKnown RBP9.65□□□□□ -0.86
RNF38-209ENST00000491349 SEC23AQ15436 765 aa9.65□□□□□ -0.86
RNF38-209ENST00000491349 TMEM92Q6UXU6 159 aa9.65□□□□□ -0.86
RNF38-209ENST00000491349 CATSPERGQ6ZRH7 1159 aa9.65□□□□□ -0.86
RNF38-209ENST00000491349 SGMS1Q86VZ5 419 aa9.65□□□□□ -0.86
RNF38-209ENST00000491349 FBXL16Q8N461 479 aa9.65□□□□□ -0.86
RNF38-209ENST00000491349 IGDCC4Q8TDY8 1250 aa9.65□□□□□ -0.86
RNF38-209ENST00000491349 BRF1Q92994 677 aa9.65□□□□□ -0.86
RNF38-209ENST00000491349 KIFC2Q96AC6 838 aa9.65□□□□□ -0.86
RNF38-209ENST00000491349 TBC1D32Q96NH3 1257 aa9.65□□□□□ -0.86
RNF38-209ENST00000491349 UPF3BQ9BZI7 483 aaKnown RBP9.65□□□□□ -0.86
RNF38-209ENST00000491349 LY9Q9HBG7 655 aa9.65□□□□□ -0.86
RNF38-209ENST00000491349 SEC63Q9UGP8 760 aaKnown RBP9.65□□□□□ -0.86
RNF38-209ENST00000491349 POTEB3A0JP26 581 aa9.64□□□□□ -0.87
RNF38-209ENST00000491349 GOLGA8AA7E2F4 631 aa9.64□□□□□ -0.87
RNF38-209ENST00000491349 GOLGA8BA8MQT2 603 aa9.64□□□□□ -0.87
RNF38-209ENST00000491349 TRPA1O75762 1119 aa9.64□□□□□ -0.87
RNF38-209ENST00000491349 CDKL5O76039 1030 aa9.64□□□□□ -0.87
RNF38-209ENST00000491349 PDHBP11177 359 aa9.64□□□□□ -0.87
RNF38-209ENST00000491349 METAP2P50579 478 aaKnown RBP eCLIP9.64□□□□□ -0.87
RNF38-209ENST00000491349 ANTXR2P58335 489 aa9.64□□□□□ -0.87
RNF38-209ENST00000491349 HERVK_113P62684 666 aa9.64□□□□□ -0.87
RNF38-209ENST00000491349 ZNF543Q08ER8 600 aa9.64□□□□□ -0.87
RNF38-209ENST00000491349 PLS1Q14651 629 aa9.64□□□□□ -0.87
RNF38-209ENST00000491349 RTN1Q16799 776 aa9.64□□□□□ -0.87
RNF38-209ENST00000491349 TREML2Q5T2D2 321 aa9.64□□□□□ -0.87
RNF38-209ENST00000491349 POTEBQ6S5H4 581 aa9.64□□□□□ -0.87
RNF38-209ENST00000491349 KCTD1Q719H9 257 aa9.64□□□□□ -0.87
RNF38-209ENST00000491349 MICU3Q86XE3 530 aa9.64□□□□□ -0.87
RNF38-209ENST00000491349 SIAH1Q8IUQ4 282 aa9.64□□□□□ -0.87
RNF38-209ENST00000491349 ZSCAN31Q96LW9 406 aaPredicted RBP9.64□□□□□ -0.87
RNF38-209ENST00000491349 LRRC2Q9BYS8 371 aa9.64□□□□□ -0.87
RNF38-209ENST00000491349 ASCC2Q9H1I8 757 aaPredicted RBP9.64□□□□□ -0.87
RNF38-209ENST00000491349 ALDH8A1Q9H2A2 487 aaPredicted RBP9.64□□□□□ -0.87
RNF38-209ENST00000491349 SLKQ9H2G2 1235 aaPredicted RBP9.64□□□□□ -0.87
RNF38-209ENST00000491349 GPCPD1Q9NPB8 672 aa9.64□□□□□ -0.87
RNF38-209ENST00000491349 RBM27Q9P2N5 1060 aaKnown RBP9.64□□□□□ -0.87
RNF38-209ENST00000491349 TACC3Q9Y6A5 838 aa9.64□□□□□ -0.87
RNF38-209ENST00000491349 TAF6LQ9Y6J9 622 aa9.64□□□□□ -0.87
RNF38-209ENST00000491349 MYH6P13533 1939 aa9.64□□□□□ -0.87
RNF38-209ENST00000491349 FRMPD2Q68DX3 1309 aaPredicted RBP9.63□□□□□ -0.87
RNF38-209ENST00000491349 KLRF2D3W0D1 207 aa9.63□□□□□ -0.87
RNF38-209ENST00000491349 IGF2BP3O00425 579 aaKnown RBP eCLIP9.63□□□□□ -0.87
RNF38-209ENST00000491349 TLR2O60603 784 aa9.63□□□□□ -0.87
RNF38-209ENST00000491349 HOXD10P28358 340 aa9.63□□□□□ -0.87
RNF38-209ENST00000491349 APOBRQ0VD83 1088 aa9.63□□□□□ -0.87
RNF38-209ENST00000491349 GRM4Q14833 912 aa9.63□□□□□ -0.87
RNF38-209ENST00000491349 SYDE2Q5VT97 1194 aa9.63□□□□□ -0.87
RNF38-209ENST00000491349 GPAT2Q6NUI2 795 aa9.63□□□□□ -0.87
RNF38-209ENST00000491349 APOA5Q6Q788 366 aa9.63□□□□□ -0.87
RNF38-209ENST00000491349 TRIM22Q8IYM9 498 aa9.63□□□□□ -0.87
RNF38-209ENST00000491349 FAM43AQ8N2R8 423 aa9.63□□□□□ -0.87
RNF38-209ENST00000491349 FANCBQ8NB91 859 aa9.63□□□□□ -0.87
RNF38-209ENST00000491349 GPRC5AQ8NFJ5 357 aa9.63□□□□□ -0.87
RNF38-209ENST00000491349 RRP36Q96EU6 259 aaKnown RBP9.63□□□□□ -0.87
RNF38-209ENST00000491349 IL17RAQ96F46 866 aa9.63□□□□□ -0.87
RNF38-209ENST00000491349 ZNF274Q96GC6 653 aaPredicted RBP9.63□□□□□ -0.87
RNF38-209ENST00000491349 TCEANC2Q96MN5 208 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms