RNA–Protein interactions for RNA: ENST00000491183.5

HMGN1-219, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 527 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-219ENST00000491183 HSPD1P10809 573 aaKnown RBP21.36■■□□□ 1.01
HMGN1-219ENST00000491183 KIFC2Q96AC6 838 aa21.36■■□□□ 1.01
HMGN1-219ENST00000491183 TEX13BQ9BXU2 312 aa21.36■■□□□ 1.01
HMGN1-219ENST00000491183 RBM27Q9P2N5 1060 aaKnown RBP21.36■■□□□ 1.01
HMGN1-219ENST00000491183 FEM1BQ9UK73 627 aa21.36■■□□□ 1.01
HMGN1-219ENST00000491183 PLXNA1Q9UIW2 1896 aa21.35■■□□□ 1.01
HMGN1-219ENST00000491183 TSPY2A6NKD2 308 aa21.35■■□□□ 1.01
HMGN1-219ENST00000491183 ATP2A1O14983 1001 aa21.35■■□□□ 1.01
HMGN1-219ENST00000491183 NMT2O60551 498 aa21.35■■□□□ 1.01
HMGN1-219ENST00000491183 MSCO60682 206 aa21.35■■□□□ 1.01
HMGN1-219ENST00000491183 BMP3P12645 472 aa21.35■■□□□ 1.01
HMGN1-219ENST00000491183 SDSP20132 328 aa21.35■■□□□ 1.01
HMGN1-219ENST00000491183 ZNF792Q3KQV3 632 aa21.35■■□□□ 1.01
HMGN1-219ENST00000491183 SNRNP48Q6IEG0 339 aaKnown RBP21.35■■□□□ 1.01
HMGN1-219ENST00000491183 CPXCR1Q8N123 301 aa21.35■■□□□ 1.01
HMGN1-219ENST00000491183 ORC4O43929 436 aa21.34■■□□□ 1.01
HMGN1-219ENST00000491183 RANBP6O60518 1105 aaKnown RBP21.34■■□□□ 1.01
HMGN1-219ENST00000491183 ZBED4O75132 1171 aa21.34■■□□□ 1.01
HMGN1-219ENST00000491183 COPB2P35606 906 aa21.34■■□□□ 1.01
HMGN1-219ENST00000491183 NOVP48745 357 aa21.34■■□□□ 1.01
HMGN1-219ENST00000491183 FXR1P51114 621 aaKnown RBP eCLIP21.34■■□□□ 1.01
HMGN1-219ENST00000491183 KCTD2Q14681 263 aa21.34■■□□□ 1.01
HMGN1-219ENST00000491183 C7orf61Q8IZ16 206 aa21.34■■□□□ 1.01
HMGN1-219ENST00000491183 CHMP4CQ96CF2 233 aa21.34■■□□□ 1.01
HMGN1-219ENST00000491183 SLC38A10Q9HBR0 1119 aa21.34■■□□□ 1.01
HMGN1-219ENST00000491183 RAVER2Q9HCJ3 691 aaKnown RBP21.34■■□□□ 1.01
HMGN1-219ENST00000491183 DIS3Q9Y2L1 958 aaKnown RBP21.34■■□□□ 1.01
HMGN1-219ENST00000491183 CCDC171Q6TFL3 1326 aa21.33■■□□□ 1.01
HMGN1-219ENST00000491183 ANO1Q5XXA6 986 aa21.33■■□□□ 1.01
HMGN1-219ENST00000491183 GMCL1Q96IK5 515 aa21.33■■□□□ 1.01
HMGN1-219ENST00000491183 STX8Q9UNK0 236 aa21.33■■□□□ 1.01
HMGN1-219ENST00000491183 SMCHD1A6NHR9 2005 aa21.33■■□□□ 1
HMGN1-219ENST00000491183 TMEM232C9JQI7 657 aa21.32■■□□□ 1
HMGN1-219ENST00000491183 SEPT4O43236 478 aa21.32■■□□□ 1
HMGN1-219ENST00000491183 MCCP23508 829 aa21.32■■□□□ 1
HMGN1-219ENST00000491183 SLC4A3P48751 1232 aa21.32■■□□□ 1
HMGN1-219ENST00000491183 ZMYM6O95789 1325 aa21.31■■□□□ 1
HMGN1-219ENST00000491183 LRRC26Q2I0M4 334 aa21.31■■□□□ 1
HMGN1-219ENST00000491183 PPP4R3BQ5MIZ7 849 aa21.31■■□□□ 1
HMGN1-219ENST00000491183 RASGRP2Q7LDG7 609 aa21.31■■□□□ 1
HMGN1-219ENST00000491183 TINF2Q9BSI4 451 aa21.31■■□□□ 1
HMGN1-219ENST00000491183 SENP6Q9GZR1 1112 aaPredicted RBP21.31■■□□□ 1
HMGN1-219ENST00000491183 ZMYND8Q9ULU4 1186 aaPredicted RBP21.31■■□□□ 1
HMGN1-219ENST00000491183 DNAJC25-GNG10A0A024R161 153 aa21.3■■□□□ 1
HMGN1-219ENST00000491183 SLC1A4P43007 532 aa21.3■■□□□ 1
HMGN1-219ENST00000491183 HAND2P61296 217 aa21.3■■□□□ 1
HMGN1-219ENST00000491183 RRP12Q5JTH9 1297 aaKnown RBP21.3■■□□□ 1
HMGN1-219ENST00000491183 RCSD1Q6JBY9 416 aa21.3■■□□□ 1
HMGN1-219ENST00000491183 STAG1Q8WVM7 1258 aa21.3■■□□□ 1
HMGN1-219ENST00000491183 TOMM22Q9NS69 142 aa21.3■■□□□ 1
HMGN1-219ENST00000491183 CTDP1Q9Y5B0 961 aaPredicted RBP21.3■■□□□ 1
HMGN1-219ENST00000491183 TRIOBPQ9H2D6 2365 aa21.3■■□□□ 1
HMGN1-219ENST00000491183 DNM1LO00429 736 aa21.29■■□□□ 1
HMGN1-219ENST00000491183 PLA2G6O60733 806 aa21.29■■□□□ 1
HMGN1-219ENST00000491183 TAL1P17542 331 aaPredicted RBP21.29■■□□□ 1
HMGN1-219ENST00000491183 SYN1P17600 705 aa21.29■■□□□ 1
HMGN1-219ENST00000491183 PDE4AP27815 886 aa21.29■■□□□ 1
HMGN1-219ENST00000491183 STAT2P52630 851 aa21.29■■□□□ 1
HMGN1-219ENST00000491183 OAZ1P54368 228 aa21.29■■□□□ 1
HMGN1-219ENST00000491183 IRX6P78412 446 aaPredicted RBP21.29■■□□□ 1
HMGN1-219ENST00000491183 GJC2Q5T442 439 aaPredicted RBP21.29■■□□□ 1
HMGN1-219ENST00000491183 CWC27Q6UX04 472 aaKnown RBP21.29■■□□□ 1
HMGN1-219ENST00000491183 KCTD1Q719H9 257 aa21.29■■□□□ 1
HMGN1-219ENST00000491183 DHX30Q7L2E3 1194 aaKnown RBP eCLIP21.29■■□□□ 1
HMGN1-219ENST00000491183 FAM160B2Q86V87 743 aa21.29■■□□□ 1
HMGN1-219ENST00000491183 CHURC1Q8WUH1 139 aa21.29■■□□□ 1
HMGN1-219ENST00000491183 DDX11Q96FC9 970 aa21.29■■□□□ 1
HMGN1-219ENST00000491183 ISY1Q9ULR0 285 aaKnown RBP21.29■■□□□ 1
HMGN1-219ENST00000491183 ZNF536O15090 1300 aa21.29■■□□□ 1
HMGN1-219ENST00000491183 FDX1P10109 184 aa21.28■■□□□ 1
HMGN1-219ENST00000491183 TBC1D10CQ8IV04 446 aa21.28■■□□□ 1
HMGN1-219ENST00000491183 ARRDC4Q8NCT1 418 aa21.28■■□□□ 1
HMGN1-219ENST00000491183 GDF15Q99988 308 aa21.28■■□□□ 1
HMGN1-219ENST00000491183 TCP11L1Q9NUJ3 509 aa21.28■■□□□ 1
HMGN1-219ENST00000491183 NRBP1Q9UHY1 535 aa21.28■■□□□ 1
HMGN1-219ENST00000491183 ZNF865P0CJ78 1059 aaPredicted RBP21.27■■□□□ 1
HMGN1-219ENST00000491183 MFAP1P55081 439 aaKnown RBP21.27■■□□□ 1
HMGN1-219ENST00000491183 AKNAD1Q5T1N1 836 aa21.27■■□□□ 1
HMGN1-219ENST00000491183 CHST13Q8NET6 341 aa21.27■■□□□ 1
HMGN1-219ENST00000491183 AGBL1Q96MI9 1066 aa21.27■■□□□ 1
HMGN1-219ENST00000491183 TMEM47Q9BQJ4 181 aa21.27■■□□□ 1
HMGN1-219ENST00000491183 PCDH10Q9P2E7 1040 aa21.27■■□□□ 1
HMGN1-219ENST00000491183 MTMR7Q9Y216 660 aa21.27■■□□□ 1
HMGN1-219ENST00000491183 SNAI1O95863 264 aaPredicted RBP21.26■□□□□ 0.99
HMGN1-219ENST00000491183 SNAP25P60880 206 aa21.26■□□□□ 0.99
HMGN1-219ENST00000491183 IKQ13123 557 aaPredicted RBP21.26■□□□□ 0.99
HMGN1-219ENST00000491183 MAMDC4Q6UXC1 1216 aa21.26■□□□□ 0.99
HMGN1-219ENST00000491183 FGD4Q96M96 766 aa21.26■□□□□ 0.99
HMGN1-219ENST00000491183 DIAPH3Q9NSV4 1193 aa21.26■□□□□ 0.99
HMGN1-219ENST00000491183 FBXO40Q9UH90 709 aa21.26■□□□□ 0.99
HMGN1-219ENST00000491183 PRR12Q9ULL5 1215 aa21.26■□□□□ 0.99
HMGN1-219ENST00000491183 TOP1P11387 765 aaKnown RBP21.25■□□□□ 0.99
HMGN1-219ENST00000491183 ATN1P54259 1190 aaPredicted RBP21.25■□□□□ 0.99
HMGN1-219ENST00000491183 LRRC41Q15345 812 aa21.25■□□□□ 0.99
HMGN1-219ENST00000491183 TTBK2Q6IQ55 1244 aa21.25■□□□□ 0.99
HMGN1-219ENST00000491183 MFSD6Q6ZSS7 791 aa21.25■□□□□ 0.99
HMGN1-219ENST00000491183 ANKRD35Q8N283 1001 aa21.25■□□□□ 0.99
HMGN1-219ENST00000491183 MSL3Q8N5Y2 521 aaKnown RBP21.25■□□□□ 0.99
HMGN1-219ENST00000491183 RANBP2P49792 3224 aaKnown RBP21.24■□□□□ 0.99
HMGN1-219ENST00000491183 HIP1O00291 1037 aa21.24■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms