RNA–Protein interactions for RNA: ENST00000491165.5

USF3-203, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USF3, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-203ENST00000491165 MAP3K9P80192 1104 aa26.15■■□□□ 1.78
USF3-203ENST00000491165 DGKZQ13574 1117 aa26.15■■□□□ 1.78
USF3-203ENST00000491165 MKL1Q969V6 931 aa26.15■■□□□ 1.78
USF3-203ENST00000491165 UBE2Q2LH0YL09 131 aa26.14■■□□□ 1.78
USF3-203ENST00000491165 ADD1P35611 737 aaKnown RBP26.14■■□□□ 1.78
USF3-203ENST00000491165 KIAA1755Q5JYT7 1200 aa26.14■■□□□ 1.78
USF3-203ENST00000491165 PTPDC1A2A3K4 754 aa26.14■■□□□ 1.77
USF3-203ENST00000491165 PTGS1P23219 599 aa26.14■■□□□ 1.77
USF3-203ENST00000491165 IREB2P48200 963 aaKnown RBP26.14■■□□□ 1.77
USF3-203ENST00000491165 ZNF165P49910 485 aa26.14■■□□□ 1.77
USF3-203ENST00000491165 NOL9Q5SY16 702 aaKnown RBP26.14■■□□□ 1.77
USF3-203ENST00000491165 CATIPQ7Z7H3 387 aa26.14■■□□□ 1.77
USF3-203ENST00000491165 BAZ2BQ9UIF8 2168 aaKnown RBP26.13■■□□□ 1.77
USF3-203ENST00000491165 METAP2P50579 478 aaKnown RBP eCLIP26.13■■□□□ 1.77
USF3-203ENST00000491165 ARHGAP30Q7Z6I6 1101 aaPredicted RBP26.13■■□□□ 1.77
USF3-203ENST00000491165 CMTR1Q8N1G2 835 aaKnown RBP26.13■■□□□ 1.77
USF3-203ENST00000491165 CTDNEP1O95476 244 aa26.12■■□□□ 1.77
USF3-203ENST00000491165 PLA2G4DQ86XP0 818 aa26.12■■□□□ 1.77
USF3-203ENST00000491165 DNAJC25Q9H1X3 360 aa26.12■■□□□ 1.77
USF3-203ENST00000491165 NID2Q14112 1375 aa26.12■■□□□ 1.77
USF3-203ENST00000491165 GOLGA8AA7E2F4 631 aa26.12■■□□□ 1.77
USF3-203ENST00000491165 ZNF75DP51815 510 aa26.12■■□□□ 1.77
USF3-203ENST00000491165 ZYXQ15942 572 aaKnown RBP26.12■■□□□ 1.77
USF3-203ENST00000491165 STAG2Q8N3U4 1231 aa26.12■■□□□ 1.77
USF3-203ENST00000491165 FANCBQ8NB91 859 aa26.12■■□□□ 1.77
USF3-203ENST00000491165 TRIM5Q9C035 493 aa26.12■■□□□ 1.77
USF3-203ENST00000491165 PTPRFP10586 1907 aa26.12■■□□□ 1.77
USF3-203ENST00000491165 PASKQ96RG2 1323 aa26.11■■□□□ 1.77
USF3-203ENST00000491165 USP17L5A8MUK1 530 aa26.11■■□□□ 1.77
USF3-203ENST00000491165 PDHBP11177 359 aa26.11■■□□□ 1.77
USF3-203ENST00000491165 USP17L2Q6R6M4 530 aa26.11■■□□□ 1.77
USF3-203ENST00000491165 DRC7Q8IY82 874 aa26.11■■□□□ 1.77
USF3-203ENST00000491165 RCOR1Q9UKL0 485 aa26.11■■□□□ 1.77
USF3-203ENST00000491165 TMX2Q9Y320 296 aa26.11■■□□□ 1.77
USF3-203ENST00000491165 ZHX2Q9Y6X8 837 aa26.11■■□□□ 1.77
USF3-203ENST00000491165 DDAH1O94760 285 aa26.11■■□□□ 1.77
USF3-203ENST00000491165 GOLGA8HP0CJ92 632 aa26.11■■□□□ 1.77
USF3-203ENST00000491165 CEBPZQ03701 1054 aaKnown RBP26.11■■□□□ 1.77
USF3-203ENST00000491165 LDLRAD1Q5T700 205 aa26.11■■□□□ 1.77
USF3-203ENST00000491165 ANKRD13AQ8IZ07 590 aa26.11■■□□□ 1.77
USF3-203ENST00000491165 ELP3Q9H9T3 547 aa26.11■■□□□ 1.77
USF3-203ENST00000491165 GBA2Q9HCG7 927 aaPredicted RBP26.11■■□□□ 1.77
USF3-203ENST00000491165 PICK1Q9NRD5 415 aa26.11■■□□□ 1.77
USF3-203ENST00000491165 ATL3Q6DD88 541 aa26.1■■□□□ 1.77
USF3-203ENST00000491165 SYNE3Q6ZMZ3 975 aa26.1■■□□□ 1.77
USF3-203ENST00000491165 SPICE1Q8N0Z3 855 aa26.1■■□□□ 1.77
USF3-203ENST00000491165 MAD2L2Q9UI95 211 aa26.1■■□□□ 1.77
USF3-203ENST00000491165 F5H6K3 240 aa26.09■■□□□ 1.77
USF3-203ENST00000491165 CTAGE5O15320 804 aa26.09■■□□□ 1.77
USF3-203ENST00000491165 RAD21O60216 631 aa26.09■■□□□ 1.77
USF3-203ENST00000491165 KLRC3Q07444 240 aa26.09■■□□□ 1.77
USF3-203ENST00000491165 CCDC186Q7Z3E2 898 aa26.09■■□□□ 1.77
USF3-203ENST00000491165 ARMC9Q7Z3E5 817 aa26.09■■□□□ 1.77
USF3-203ENST00000491165 NBPF11Q86T75 865 aa26.09■■□□□ 1.77
USF3-203ENST00000491165 GINM1Q9NU53 330 aa26.09■■□□□ 1.77
USF3-203ENST00000491165 CSADQ9Y600 493 aa26.09■■□□□ 1.77
USF3-203ENST00000491165 PLEKHA8P1O95397 391 aa26.09■■□□□ 1.77
USF3-203ENST00000491165 SNHG28P0DPA3 235 aa26.09■■□□□ 1.77
USF3-203ENST00000491165 FOSBP53539 338 aa26.09■■□□□ 1.77
USF3-203ENST00000491165 SPP2Q13103 211 aa26.09■■□□□ 1.77
USF3-203ENST00000491165 NTRK3Q16288 839 aa26.09■■□□□ 1.77
USF3-203ENST00000491165 ZNF396Q96N95 335 aaPredicted RBP26.09■■□□□ 1.77
USF3-203ENST00000491165 CPVLQ9H3G5 476 aa26.09■■□□□ 1.77
USF3-203ENST00000491165 ARHGEF10LQ9HCE6 1279 aa26.09■■□□□ 1.77
USF3-203ENST00000491165 RTN1Q16799 776 aa26.08■■□□□ 1.77
USF3-203ENST00000491165 CCAR1Q8IX12 1150 aaKnown RBP26.08■■□□□ 1.77
USF3-203ENST00000491165 NUP88Q99567 741 aaPredicted RBP26.08■■□□□ 1.77
USF3-203ENST00000491165 TRIM75PA6NK02 468 aa26.08■■□□□ 1.76
USF3-203ENST00000491165 TOMM70O94826 608 aa26.08■■□□□ 1.76
USF3-203ENST00000491165 NDUFB10O96000 172 aa26.08■■□□□ 1.76
USF3-203ENST00000491165 RCAN1P53805 252 aa26.08■■□□□ 1.76
USF3-203ENST00000491165 MTMR2Q13614 643 aa26.08■■□□□ 1.76
USF3-203ENST00000491165 SLC35G1Q2M3R5 365 aa26.08■■□□□ 1.76
USF3-203ENST00000491165 CCDC82Q8N4S0 544 aa26.08■■□□□ 1.76
USF3-203ENST00000491165 FRMPD2Q68DX3 1309 aaPredicted RBP26.07■■□□□ 1.76
USF3-203ENST00000491165 GRM4Q14833 912 aa26.07■■□□□ 1.76
USF3-203ENST00000491165 AFG3L2Q9Y4W6 797 aa26.07■■□□□ 1.76
USF3-203ENST00000491165 PPP4R3BQ5MIZ7 849 aa26.06■■□□□ 1.76
USF3-203ENST00000491165 KCTD1Q719H9 257 aa26.06■■□□□ 1.76
USF3-203ENST00000491165 ZNF280CQ8ND82 737 aa26.06■■□□□ 1.76
USF3-203ENST00000491165 SMC1BQ8NDV3 1235 aa26.06■■□□□ 1.76
USF3-203ENST00000491165 GMCL1P1Q8NEA9 526 aa26.06■■□□□ 1.76
USF3-203ENST00000491165 SLFN13Q68D06 897 aa26.06■■□□□ 1.76
USF3-203ENST00000491165 CCDC73Q6ZRK6 1079 aa26.06■■□□□ 1.76
USF3-203ENST00000491165 PHKBQ93100 1093 aa26.06■■□□□ 1.76
USF3-203ENST00000491165 USP28Q96RU2 1077 aa26.06■■□□□ 1.76
USF3-203ENST00000491165 WDR18Q9BV38 432 aa26.06■■□□□ 1.76
USF3-203ENST00000491165 FTOQ9C0B1 505 aaKnown RBP eCLIP26.06■■□□□ 1.76
USF3-203ENST00000491165 PALM3A6NDB9 673 aaPredicted RBP26.05■■□□□ 1.76
USF3-203ENST00000491165 CALM1P0DP23 149 aa26.05■■□□□ 1.76
USF3-203ENST00000491165 CALM2P0DP24 149 aa26.05■■□□□ 1.76
USF3-203ENST00000491165 CALM3P0DP25 149 aa26.05■■□□□ 1.76
USF3-203ENST00000491165 OTUD5Q96G74 571 aa26.05■■□□□ 1.76
USF3-203ENST00000491165 VCPKMTQ9H867 229 aa26.05■■□□□ 1.76
USF3-203ENST00000491165 USP17L10C9JJH3 530 aa26.05■■□□□ 1.76
USF3-203ENST00000491165 GOLGA6L19H0YKK7 550 aa26.05■■□□□ 1.76
USF3-203ENST00000491165 IRF6O14896 467 aa26.05■■□□□ 1.76
USF3-203ENST00000491165 GJA5P36382 358 aa26.05■■□□□ 1.76
USF3-203ENST00000491165 FUT2Q10981 343 aa26.05■■□□□ 1.76
USF3-203ENST00000491165 STX1AQ16623 288 aa26.05■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 194.4 ms