RNA–Protein interactions for RNA: ENST00000491064.5

CTDSP1-210, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 786 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-210ENST00000491064 CDK8P49336 464 aa16.46■□□□□ 0.23
CTDSP1-210ENST00000491064 CDK7P50613 346 aa16.46■□□□□ 0.23
CTDSP1-210ENST00000491064 CEP85Q6P2H3 762 aa16.46■□□□□ 0.23
CTDSP1-210ENST00000491064 CCDC174Q6PII3 467 aa16.46■□□□□ 0.23
CTDSP1-210ENST00000491064 CCDC129Q6ZRS4 1044 aa16.46■□□□□ 0.23
CTDSP1-210ENST00000491064 ASB2Q96Q27 587 aa16.46■□□□□ 0.23
CTDSP1-210ENST00000491064 FAM184BQ9ULE4 1060 aa16.46■□□□□ 0.23
CTDSP1-210ENST00000491064 ELP1O95163 1332 aa16.45■□□□□ 0.22
CTDSP1-210ENST00000491064 REV3LO60673 3130 aa16.45■□□□□ 0.22
CTDSP1-210ENST00000491064 CYP2D7A0A087X1C5 515 aa16.45■□□□□ 0.22
CTDSP1-210ENST00000491064 GOLIM4O00461 696 aa16.45■□□□□ 0.22
CTDSP1-210ENST00000491064 DUSP11O75319 330 aaKnown RBP16.45■□□□□ 0.22
CTDSP1-210ENST00000491064 CSF2RAP15509 400 aa16.45■□□□□ 0.22
CTDSP1-210ENST00000491064 CST5P28325 142 aaPredicted RBP16.45■□□□□ 0.22
CTDSP1-210ENST00000491064 IRX5P78411 483 aaPredicted RBP16.45■□□□□ 0.22
CTDSP1-210ENST00000491064 ADGRE1Q14246 886 aa16.45■□□□□ 0.22
CTDSP1-210ENST00000491064 FAM83BQ5T0W9 1011 aa16.45■□□□□ 0.22
CTDSP1-210ENST00000491064 C12orf60Q5U649 245 aa16.45■□□□□ 0.22
CTDSP1-210ENST00000491064 MAMDC4Q6UXC1 1216 aa16.45■□□□□ 0.22
CTDSP1-210ENST00000491064 ITPRIPQ8IWB1 547 aa16.45■□□□□ 0.22
CTDSP1-210ENST00000491064 FTSJ3Q8IY81 847 aaKnown RBP16.45■□□□□ 0.22
CTDSP1-210ENST00000491064 ADAMTS19Q8TE59 1207 aa16.45■□□□□ 0.22
CTDSP1-210ENST00000491064 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.45■□□□□ 0.22
CTDSP1-210ENST00000491064 GLT1D1Q96MS3 346 aa16.45■□□□□ 0.22
CTDSP1-210ENST00000491064 KANSL2Q9H9L4 492 aa16.45■□□□□ 0.22
CTDSP1-210ENST00000491064 GOPCQ9HD26 462 aa16.45■□□□□ 0.22
CTDSP1-210ENST00000491064 IL1RAPL2Q9NP60 686 aa16.45■□□□□ 0.22
CTDSP1-210ENST00000491064 ATP8A2Q9NTI2 1148 aa16.45■□□□□ 0.22
CTDSP1-210ENST00000491064 ZHX1Q9UKY1 873 aaPredicted RBP16.45■□□□□ 0.22
CTDSP1-210ENST00000491064 GREB1LQ9C091 1923 aaPredicted RBP16.45■□□□□ 0.22
CTDSP1-210ENST00000491064 RLBP1P12271 317 aa16.44■□□□□ 0.22
CTDSP1-210ENST00000491064 PSRC1Q6PGN9 363 aaPredicted RBP16.44■□□□□ 0.22
CTDSP1-210ENST00000491064 C16orf86Q6ZW13 317 aa16.44■□□□□ 0.22
CTDSP1-210ENST00000491064 ZNF365Q70YC5 407 aa16.44■□□□□ 0.22
CTDSP1-210ENST00000491064 TMEM199Q8N511 208 aa16.44■□□□□ 0.22
CTDSP1-210ENST00000491064 DNAJC2Q99543 621 aaKnown RBP16.44■□□□□ 0.22
CTDSP1-210ENST00000491064 TEX13BQ9BXU2 312 aa16.44■□□□□ 0.22
CTDSP1-210ENST00000491064 DNAJC25-GNG10A0A024R161 153 aa16.43■□□□□ 0.22
CTDSP1-210ENST00000491064 ADCY6O43306 1168 aa16.43■□□□□ 0.22
CTDSP1-210ENST00000491064 MBD4O95243 580 aa16.43■□□□□ 0.22
CTDSP1-210ENST00000491064 ASGR1P07306 291 aa16.43■□□□□ 0.22
CTDSP1-210ENST00000491064 C6orf222P0C671 652 aaPredicted RBP16.43■□□□□ 0.22
CTDSP1-210ENST00000491064 ACRP10323 421 aa16.43■□□□□ 0.22
CTDSP1-210ENST00000491064 MRPS5P82675 430 aaKnown RBP16.43■□□□□ 0.22
CTDSP1-210ENST00000491064 SLFNL1Q499Z3 407 aa16.43■□□□□ 0.22
CTDSP1-210ENST00000491064 PCSK9Q8NBP7 692 aaKnown RBP16.43■□□□□ 0.22
CTDSP1-210ENST00000491064 RHPN1Q8TCX5 695 aa16.43■□□□□ 0.22
CTDSP1-210ENST00000491064 DDX11Q96FC9 970 aa16.43■□□□□ 0.22
CTDSP1-210ENST00000491064 MYH7P12883 1935 aa16.43■□□□□ 0.22
CTDSP1-210ENST00000491064 TCF20Q9UGU0 1960 aaKnown RBP16.42■□□□□ 0.22
CTDSP1-210ENST00000491064 A0A0U1RQG5 324 aaPredicted RBP16.42■□□□□ 0.22
CTDSP1-210ENST00000491064 USP17L12C9JPN9 530 aa16.42■□□□□ 0.22
CTDSP1-210ENST00000491064 USP17L21D6R901 530 aa16.42■□□□□ 0.22
CTDSP1-210ENST00000491064 ARVCFO00192 962 aa16.42■□□□□ 0.22
CTDSP1-210ENST00000491064 RAD21O60216 631 aa16.42■□□□□ 0.22
CTDSP1-210ENST00000491064 ADD2P35612 726 aa16.42■□□□□ 0.22
CTDSP1-210ENST00000491064 GJA9P57773 515 aa16.42■□□□□ 0.22
CTDSP1-210ENST00000491064 ACVR2BQ13705 512 aa16.42■□□□□ 0.22
CTDSP1-210ENST00000491064 RAB30Q15771 203 aa16.42■□□□□ 0.22
CTDSP1-210ENST00000491064 CCDC85BQ15834 202 aaPredicted RBP16.42■□□□□ 0.22
CTDSP1-210ENST00000491064 SNRNP48Q6IEG0 339 aaKnown RBP16.42■□□□□ 0.22
CTDSP1-210ENST00000491064 ZNF467Q7Z7K2 595 aaPredicted RBP16.42■□□□□ 0.22
CTDSP1-210ENST00000491064 FAM126BQ8IXS8 530 aa16.42■□□□□ 0.22
CTDSP1-210ENST00000491064 UHRF1Q96T88 793 aaPredicted RBP16.42■□□□□ 0.22
CTDSP1-210ENST00000491064 SLF1Q9BQI6 1058 aa16.42■□□□□ 0.22
CTDSP1-210ENST00000491064 PPP1R12CQ9BZL4 782 aa16.42■□□□□ 0.22
CTDSP1-210ENST00000491064 UPF3AQ9H1J1 476 aaKnown RBP16.42■□□□□ 0.22
CTDSP1-210ENST00000491064 RIPK3Q9Y572 518 aa16.42■□□□□ 0.22
CTDSP1-210ENST00000491064 AMOTL1Q8IY63 956 aa16.41■□□□□ 0.22
CTDSP1-210ENST00000491064 HERVK_113Q902F9 699 aa16.41■□□□□ 0.22
CTDSP1-210ENST00000491064 VTI1AQ96AJ9 217 aa16.41■□□□□ 0.22
CTDSP1-210ENST00000491064 NUP88Q99567 741 aaPredicted RBP16.41■□□□□ 0.22
CTDSP1-210ENST00000491064 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.41■□□□□ 0.22
CTDSP1-210ENST00000491064 SPC25Q9HBM1 224 aa16.41■□□□□ 0.22
CTDSP1-210ENST00000491064 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.41■□□□□ 0.22
CTDSP1-210ENST00000491064 CXXC1Q9P0U4 656 aaPredicted RBP16.41■□□□□ 0.22
CTDSP1-210ENST00000491064 MSRAQ9UJ68 235 aa16.41■□□□□ 0.22
CTDSP1-210ENST00000491064 ZBED9Q6R2W3 1325 aa16.41■□□□□ 0.22
CTDSP1-210ENST00000491064 APBB1O00213 710 aa16.4■□□□□ 0.22
CTDSP1-210ENST00000491064 TLR3O15455 904 aaKnown RBP16.4■□□□□ 0.22
CTDSP1-210ENST00000491064 CD4P01730 458 aa16.4■□□□□ 0.22
CTDSP1-210ENST00000491064 IGFBP4P22692 258 aa16.4■□□□□ 0.22
CTDSP1-210ENST00000491064 CYP2C18P33260 490 aa16.4■□□□□ 0.22
CTDSP1-210ENST00000491064 CCDC144BQ3MJ40 725 aa16.4■□□□□ 0.22
CTDSP1-210ENST00000491064 HSP90AB4PQ58FF6 505 aa16.4■□□□□ 0.22
CTDSP1-210ENST00000491064 GNASQ5JWF2 1037 aa16.4■□□□□ 0.22
CTDSP1-210ENST00000491064 CLASRPQ8N2M8 674 aaKnown RBP16.4■□□□□ 0.22
CTDSP1-210ENST00000491064 FGD4Q96M96 766 aa16.4■□□□□ 0.22
CTDSP1-210ENST00000491064 NKX2-4Q9H2Z4 354 aa16.4■□□□□ 0.22
CTDSP1-210ENST00000491064 ABHD16BQ9H3Z7 469 aa16.4■□□□□ 0.22
CTDSP1-210ENST00000491064 IL23AQ9NPF7 189 aa16.4■□□□□ 0.22
CTDSP1-210ENST00000491064 PAG1Q9NWQ8 432 aa16.4■□□□□ 0.22
CTDSP1-210ENST00000491064 MYH4Q9Y623 1939 aa16.39■□□□□ 0.21
CTDSP1-210ENST00000491064 ATP2A1O14983 1001 aa16.39■□□□□ 0.21
CTDSP1-210ENST00000491064 CTAGE5O15320 804 aa16.39■□□□□ 0.21
CTDSP1-210ENST00000491064 PLA2G5P39877 138 aa16.39■□□□□ 0.21
CTDSP1-210ENST00000491064 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.39■□□□□ 0.21
CTDSP1-210ENST00000491064 YBX2Q9Y2T7 364 aaKnown RBP16.39■□□□□ 0.21
CTDSP1-210ENST00000491064 CHGBP05060 677 aa16.38■□□□□ 0.21
CTDSP1-210ENST00000491064 IFIT2P09913 472 aaKnown RBP16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms