RNA–Protein interactions for RNA: ENST00000490889.2

SRGAP3-209, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 4

Gene SRGAP3, Length 622 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-209ENST00000490889 APPP05067 770 aa19.84■□□□□ 0.77
SRGAP3-209ENST00000490889 RARBP10826 455 aa19.84■□□□□ 0.77
SRGAP3-209ENST00000490889 GNAT2P19087 354 aa19.84■□□□□ 0.77
SRGAP3-209ENST00000490889 COPB2P35606 906 aa19.84■□□□□ 0.77
SRGAP3-209ENST00000490889 IFNL3Q8IZI9 196 aa19.84■□□□□ 0.77
SRGAP3-209ENST00000490889 LRRC47Q8N1G4 583 aaKnown RBP19.84■□□□□ 0.77
SRGAP3-209ENST00000490889 BADQ92934 168 aa19.84■□□□□ 0.77
SRGAP3-209ENST00000490889 TRIM43Q96BQ3 446 aaPredicted RBP19.84■□□□□ 0.77
SRGAP3-209ENST00000490889 MTMR4Q9NYA4 1195 aa19.84■□□□□ 0.77
SRGAP3-209ENST00000490889 DNAJC25-GNG10A0A024R161 153 aa19.83■□□□□ 0.77
SRGAP3-209ENST00000490889 PATL2C9JE40 543 aaKnown RBP19.83■□□□□ 0.77
SRGAP3-209ENST00000490889 POTEB2H3BUK9 544 aa19.83■□□□□ 0.77
SRGAP3-209ENST00000490889 SHHQ15465 462 aa19.83■□□□□ 0.77
SRGAP3-209ENST00000490889 C9orf50Q5SZB4 431 aa19.83■□□□□ 0.77
SRGAP3-209ENST00000490889 C1orf53Q5VUE5 145 aa19.83■□□□□ 0.77
SRGAP3-209ENST00000490889 CPXCR1Q8N123 301 aa19.83■□□□□ 0.77
SRGAP3-209ENST00000490889 PRPF38AQ8NAV1 312 aaKnown RBP19.83■□□□□ 0.77
SRGAP3-209ENST00000490889 MKL1Q969V6 931 aa19.83■□□□□ 0.77
SRGAP3-209ENST00000490889 TTC41PQ6P2S7 1318 aa19.82■□□□□ 0.76
SRGAP3-209ENST00000490889 ATP2A1O14983 1001 aa19.82■□□□□ 0.76
SRGAP3-209ENST00000490889 ADAMTS4O75173 837 aa19.82■□□□□ 0.76
SRGAP3-209ENST00000490889 SNAI1O95863 264 aaPredicted RBP19.82■□□□□ 0.76
SRGAP3-209ENST00000490889 AKR1A1P14550 325 aa19.82■□□□□ 0.76
SRGAP3-209ENST00000490889 ITGB8P26012 769 aa19.82■□□□□ 0.76
SRGAP3-209ENST00000490889 SLC4A3P48751 1232 aa19.82■□□□□ 0.76
SRGAP3-209ENST00000490889 TLE2Q04725 743 aa19.82■□□□□ 0.76
SRGAP3-209ENST00000490889 ZNF444Q8N0Y2 327 aaPredicted RBP19.82■□□□□ 0.76
SRGAP3-209ENST00000490889 KIFC2Q96AC6 838 aa19.82■□□□□ 0.76
SRGAP3-209ENST00000490889 RAVER2Q9HCJ3 691 aaKnown RBP19.82■□□□□ 0.76
SRGAP3-209ENST00000490889 PLIN4Q96Q06 1357 aa19.82■□□□□ 0.76
SRGAP3-209ENST00000490889 RNF180Q86T96 592 aa19.81■□□□□ 0.76
SRGAP3-209ENST00000490889 FGD4Q96M96 766 aa19.81■□□□□ 0.76
SRGAP3-209ENST00000490889 GUCD1Q96NT3 240 aa19.81■□□□□ 0.76
SRGAP3-209ENST00000490889 SLC38A10Q9HBR0 1119 aa19.81■□□□□ 0.76
SRGAP3-209ENST00000490889 EYSQ5T1H1 3165 aa19.81■□□□□ 0.76
SRGAP3-209ENST00000490889 A0A1W2PQ45 241 aaPredicted RBP19.8■□□□□ 0.76
SRGAP3-209ENST00000490889 A0A1W2PQY0 241 aa19.8■□□□□ 0.76
SRGAP3-209ENST00000490889 DLL1O00548 723 aa19.8■□□□□ 0.76
SRGAP3-209ENST00000490889 FOXP2O15409 715 aa19.8■□□□□ 0.76
SRGAP3-209ENST00000490889 ZBED4O75132 1171 aa19.8■□□□□ 0.76
SRGAP3-209ENST00000490889 TTLL1O95922 423 aa19.8■□□□□ 0.76
SRGAP3-209ENST00000490889 ZMYM1Q5SVZ6 1142 aa19.8■□□□□ 0.76
SRGAP3-209ENST00000490889 MAMDC4Q6UXC1 1216 aa19.8■□□□□ 0.76
SRGAP3-209ENST00000490889 NEDD1Q8NHV4 660 aa19.8■□□□□ 0.76
SRGAP3-209ENST00000490889 DDX11Q96FC9 970 aa19.8■□□□□ 0.76
SRGAP3-209ENST00000490889 FAM161BQ96MY7 647 aa19.8■□□□□ 0.76
SRGAP3-209ENST00000490889 FSD1Q9BTV5 496 aa19.8■□□□□ 0.76
SRGAP3-209ENST00000490889 CNPY2Q9Y2B0 182 aa19.8■□□□□ 0.76
SRGAP3-209ENST00000490889 CUL9Q8IWT3 2517 aa19.8■□□□□ 0.76
SRGAP3-209ENST00000490889 CDH23Q9H251 3354 aa19.8■□□□□ 0.76
SRGAP3-209ENST00000490889 SYNGAP1Q96PV0 1343 aa19.79■□□□□ 0.76
SRGAP3-209ENST00000490889 SALL3Q9BXA9 1300 aa19.79■□□□□ 0.76
SRGAP3-209ENST00000490889 SYNRGQ9UMZ2 1314 aa19.79■□□□□ 0.76
SRGAP3-209ENST00000490889 IRX5P78411 483 aaPredicted RBP19.79■□□□□ 0.76
SRGAP3-209ENST00000490889 FAM109BQ6ICB4 259 aaPredicted RBP19.79■□□□□ 0.76
SRGAP3-209ENST00000490889 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.79■□□□□ 0.76
SRGAP3-209ENST00000490889 MSL3Q8N5Y2 521 aaKnown RBP19.79■□□□□ 0.76
SRGAP3-209ENST00000490889 GMCL1P1Q8NEA9 526 aa19.79■□□□□ 0.76
SRGAP3-209ENST00000490889 ZNF287Q9HBT7 754 aa19.79■□□□□ 0.76
SRGAP3-209ENST00000490889 FEM1BQ9UK73 627 aa19.79■□□□□ 0.76
SRGAP3-209ENST00000490889 ZHX1Q9UKY1 873 aaPredicted RBP19.79■□□□□ 0.76
SRGAP3-209ENST00000490889 SYNPO2Q9UMS6 1093 aa19.79■□□□□ 0.76
SRGAP3-209ENST00000490889 MCM3APO60318 1980 aa19.79■□□□□ 0.76
SRGAP3-209ENST00000490889 MYADML2A6NDP7 307 aa19.78■□□□□ 0.76
SRGAP3-209ENST00000490889 ADCY6O43306 1168 aa19.78■□□□□ 0.76
SRGAP3-209ENST00000490889 TSPY3P0CV98 308 aa19.78■□□□□ 0.76
SRGAP3-209ENST00000490889 TSPY8P0CW00 308 aa19.78■□□□□ 0.76
SRGAP3-209ENST00000490889 TFAP4Q01664 338 aa19.78■□□□□ 0.76
SRGAP3-209ENST00000490889 PPARAQ07869 468 aa19.78■□□□□ 0.76
SRGAP3-209ENST00000490889 SLFN13Q68D06 897 aa19.78■□□□□ 0.76
SRGAP3-209ENST00000490889 CCDC129Q6ZRS4 1044 aa19.78■□□□□ 0.76
SRGAP3-209ENST00000490889 KLHDC9Q8NEP7 349 aa19.78■□□□□ 0.76
SRGAP3-209ENST00000490889 CHMP4CQ96CF2 233 aa19.78■□□□□ 0.76
SRGAP3-209ENST00000490889 NAPBQ9H115 298 aa19.78■□□□□ 0.76
SRGAP3-209ENST00000490889 ERC2O15083 957 aa19.77■□□□□ 0.76
SRGAP3-209ENST00000490889 PQBP1O60828 265 aaKnown RBP19.77■□□□□ 0.76
SRGAP3-209ENST00000490889 CLTBP09497 229 aa19.77■□□□□ 0.76
SRGAP3-209ENST00000490889 BMP3P12645 472 aa19.77■□□□□ 0.76
SRGAP3-209ENST00000490889 MX1P20591 662 aa19.77■□□□□ 0.76
SRGAP3-209ENST00000490889 ACLYP53396 1101 aa19.77■□□□□ 0.76
SRGAP3-209ENST00000490889 EPHB4P54760 987 aa19.77■□□□□ 0.76
SRGAP3-209ENST00000490889 LRRFIP1Q32MZ4 808 aaKnown RBP19.77■□□□□ 0.76
SRGAP3-209ENST00000490889 CCSAPQ6IQ19 270 aaPredicted RBP19.77■□□□□ 0.76
SRGAP3-209ENST00000490889 ZNF467Q7Z7K2 595 aaPredicted RBP19.77■□□□□ 0.76
SRGAP3-209ENST00000490889 NACAP1Q9BZK3 213 aa19.77■□□□□ 0.76
SRGAP3-209ENST00000490889 INCENPQ9NQS7 918 aa19.77■□□□□ 0.76
SRGAP3-209ENST00000490889 CDKN2AIPQ9NXV6 580 aaPredicted RBP19.77■□□□□ 0.76
SRGAP3-209ENST00000490889 FAM184BQ9ULE4 1060 aa19.77■□□□□ 0.76
SRGAP3-209ENST00000490889 TACC3Q9Y6A5 838 aa19.77■□□□□ 0.76
SRGAP3-209ENST00000490889 PDE4BQ07343 736 aa19.76■□□□□ 0.75
SRGAP3-209ENST00000490889 RASGRP2Q7LDG7 609 aa19.76■□□□□ 0.75
SRGAP3-209ENST00000490889 ANKRD35Q8N283 1001 aa19.76■□□□□ 0.75
SRGAP3-209ENST00000490889 TSEN34Q9BSV6 310 aaKnown RBP19.76■□□□□ 0.75
SRGAP3-209ENST00000490889 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.76■□□□□ 0.75
SRGAP3-209ENST00000490889 CTDP1Q9Y5B0 961 aaPredicted RBP19.76■□□□□ 0.75
SRGAP3-209ENST00000490889 ZNF536O15090 1300 aa19.76■□□□□ 0.75
SRGAP3-209ENST00000490889 TMEM232C9JQI7 657 aa19.75■□□□□ 0.75
SRGAP3-209ENST00000490889 KIAA0355O15063 1070 aa19.75■□□□□ 0.75
SRGAP3-209ENST00000490889 OAZ1P54368 228 aa19.75■□□□□ 0.75
SRGAP3-209ENST00000490889 ACVR2BQ13705 512 aa19.75■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms