RNA–Protein interactions for RNA: ENST00000490851.5

HDAC9-225, Transcript of histone deacetylase 9, humanhuman

TSL 2

Gene HDAC9, Length 2,419 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-225ENST00000490851 WWC2Q6AWC2 1192 aa11.55□□□□□ -0.56
HDAC9-225ENST00000490851 TYW1BQ6NUM6 668 aa11.55□□□□□ -0.56
HDAC9-225ENST00000490851 RASGRP4Q8TDF6 673 aa11.55□□□□□ -0.56
HDAC9-225ENST00000490851 FER1L6Q2WGJ9 1857 aa11.54□□□□□ -0.56
HDAC9-225ENST00000490851 LOC102724159A0A0B4J2E5 919 aa11.54□□□□□ -0.56
HDAC9-225ENST00000490851 KINO60870 393 aaKnown RBP11.54□□□□□ -0.56
HDAC9-225ENST00000490851 ENTPD3O75355 529 aa11.54□□□□□ -0.56
HDAC9-225ENST00000490851 PRELPP51888 382 aa11.54□□□□□ -0.56
HDAC9-225ENST00000490851 PTPAQ15257 358 aa11.54□□□□□ -0.56
HDAC9-225ENST00000490851 PWP2Q15269 919 aaKnown RBP11.54□□□□□ -0.56
HDAC9-225ENST00000490851 NPY5RQ15761 445 aa11.54□□□□□ -0.56
HDAC9-225ENST00000490851 SPECC1Q5M775 1068 aa11.54□□□□□ -0.56
HDAC9-225ENST00000490851 ADALQ6DHV7 355 aa11.54□□□□□ -0.56
HDAC9-225ENST00000490851 PIK3AP1Q6ZUJ8 805 aa11.54□□□□□ -0.56
HDAC9-225ENST00000490851 KCTD1Q719H9 257 aa11.54□□□□□ -0.56
HDAC9-225ENST00000490851 KCTD17Q8N5Z5 321 aa11.54□□□□□ -0.56
HDAC9-225ENST00000490851 ERCC4Q92889 916 aaPredicted RBP11.54□□□□□ -0.56
HDAC9-225ENST00000490851 PIGSQ96S52 555 aa11.54□□□□□ -0.56
HDAC9-225ENST00000490851 TMEM39BQ9GZU3 492 aa11.54□□□□□ -0.56
HDAC9-225ENST00000490851 VPS33BQ9H267 617 aa11.54□□□□□ -0.56
HDAC9-225ENST00000490851 EGFRP00533 1210 aa11.54□□□□□ -0.56
HDAC9-225ENST00000490851 EEF2P13639 858 aaKnown RBP11.54□□□□□ -0.56
HDAC9-225ENST00000490851 SLC16A2P36021 539 aa11.54□□□□□ -0.56
HDAC9-225ENST00000490851 FAM160A1Q05DH4 1040 aa11.54□□□□□ -0.56
HDAC9-225ENST00000490851 RILPL1Q5EBL4 403 aa11.54□□□□□ -0.56
HDAC9-225ENST00000490851 AGBL3Q8NEM8 1001 aa11.54□□□□□ -0.56
HDAC9-225ENST00000490851 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.54□□□□□ -0.56
HDAC9-225ENST00000490851 WNT7AO00755 349 aa11.53□□□□□ -0.56
HDAC9-225ENST00000490851 GH2P01242 217 aa11.53□□□□□ -0.56
HDAC9-225ENST00000490851 SSR1P43307 286 aaKnown RBP11.53□□□□□ -0.56
HDAC9-225ENST00000490851 JAG1P78504 1218 aa11.53□□□□□ -0.56
HDAC9-225ENST00000490851 ICA1Q05084 483 aa11.53□□□□□ -0.56
HDAC9-225ENST00000490851 SNW1Q13573 536 aaKnown RBP11.53□□□□□ -0.56
HDAC9-225ENST00000490851 RRP1BQ14684 758 aaKnown RBP11.53□□□□□ -0.56
HDAC9-225ENST00000490851 ABCB5Q2M3G0 1257 aa11.53□□□□□ -0.56
HDAC9-225ENST00000490851 SPDYE2Q495Y8 402 aa11.53□□□□□ -0.56
HDAC9-225ENST00000490851 TTBK2Q6IQ55 1244 aa11.53□□□□□ -0.56
HDAC9-225ENST00000490851 MIGA2Q7L4E1 593 aa11.53□□□□□ -0.56
HDAC9-225ENST00000490851 FOXP4Q8IVH2 680 aaPredicted RBP11.53□□□□□ -0.56
HDAC9-225ENST00000490851 RRP36Q96EU6 259 aaKnown RBP11.53□□□□□ -0.56
HDAC9-225ENST00000490851 CCDC17Q96LX7 622 aa11.53□□□□□ -0.56
HDAC9-225ENST00000490851 MYOZ2Q9NPC6 264 aa11.53□□□□□ -0.56
HDAC9-225ENST00000490851 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.53□□□□□ -0.56
HDAC9-225ENST00000490851 SEC63Q9UGP8 760 aaKnown RBP11.53□□□□□ -0.56
HDAC9-225ENST00000490851 MYH4Q9Y623 1939 aa11.53□□□□□ -0.56
HDAC9-225ENST00000490851 MYO1BO43795 1136 aa11.52□□□□□ -0.56
HDAC9-225ENST00000490851 PFKFB1P16118 471 aa11.52□□□□□ -0.56
HDAC9-225ENST00000490851 NOVP48745 357 aa11.52□□□□□ -0.56
HDAC9-225ENST00000490851 NAPAP54920 295 aa11.52□□□□□ -0.56
HDAC9-225ENST00000490851 GRIN1Q05586 938 aa11.52□□□□□ -0.56
HDAC9-225ENST00000490851 TNIP1Q15025 636 aa11.52□□□□□ -0.56
HDAC9-225ENST00000490851 ZNF174Q15697 407 aa11.52□□□□□ -0.56
HDAC9-225ENST00000490851 JMYQ8N9B5 988 aa11.52□□□□□ -0.56
HDAC9-225ENST00000490851 LZTS2Q9BRK4 669 aa11.52□□□□□ -0.56
HDAC9-225ENST00000490851 SPZ1Q9BXG8 430 aa11.52□□□□□ -0.56
HDAC9-225ENST00000490851 CNTNAP1P78357 1384 aa11.52□□□□□ -0.57
HDAC9-225ENST00000490851 A0A087WWV3 80 aa11.52□□□□□ -0.57
HDAC9-225ENST00000490851 TRIM75PA6NK02 468 aa11.52□□□□□ -0.57
HDAC9-225ENST00000490851 STXBP3O00186 592 aa11.52□□□□□ -0.57
HDAC9-225ENST00000490851 WNT10BO00744 389 aa11.52□□□□□ -0.57
HDAC9-225ENST00000490851 NPM3O75607 178 aaKnown RBP11.52□□□□□ -0.57
HDAC9-225ENST00000490851 GMPSP49915 693 aaPredicted RBP11.52□□□□□ -0.57
HDAC9-225ENST00000490851 TATDN1Q6P1N9 297 aa11.52□□□□□ -0.57
HDAC9-225ENST00000490851 BLIDQ8IZY5 108 aa11.52□□□□□ -0.57
HDAC9-225ENST00000490851 ENGASEQ8NFI3 743 aa11.52□□□□□ -0.57
HDAC9-225ENST00000490851 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.52□□□□□ -0.57
HDAC9-225ENST00000490851 ATRNL1Q5VV63 1379 aa11.52□□□□□ -0.57
HDAC9-225ENST00000490851 A0A1W2PQ27 194 aa11.51□□□□□ -0.57
HDAC9-225ENST00000490851 A0A1W2PQ64 194 aa11.51□□□□□ -0.57
HDAC9-225ENST00000490851 A0A1W2PQD8 194 aa11.51□□□□□ -0.57
HDAC9-225ENST00000490851 NRDCO43847 1150 aa11.51□□□□□ -0.57
HDAC9-225ENST00000490851 ZNF543Q08ER8 600 aa11.51□□□□□ -0.57
HDAC9-225ENST00000490851 ZKSCAN8Q15776 578 aaPredicted RBP11.51□□□□□ -0.57
HDAC9-225ENST00000490851 TBC1D10BQ4KMP7 808 aaPredicted RBP11.51□□□□□ -0.57
HDAC9-225ENST00000490851 ASPRV1Q53RT3 343 aa11.51□□□□□ -0.57
HDAC9-225ENST00000490851 SHC4Q6S5L8 630 aa11.51□□□□□ -0.57
HDAC9-225ENST00000490851 SAMD7Q7Z3H4 446 aa11.51□□□□□ -0.57
HDAC9-225ENST00000490851 FMR1NBQ8N0W7 255 aaPredicted RBP11.51□□□□□ -0.57
HDAC9-225ENST00000490851 FAM151AQ8WW52 585 aa11.51□□□□□ -0.57
HDAC9-225ENST00000490851 TNFRSF25Q93038 417 aa11.51□□□□□ -0.57
HDAC9-225ENST00000490851 NUP88Q99567 741 aaPredicted RBP11.51□□□□□ -0.57
HDAC9-225ENST00000490851 BARHL2Q9NY43 387 aa11.51□□□□□ -0.57
HDAC9-225ENST00000490851 NOL7Q9UMY1 257 aaKnown RBP11.51□□□□□ -0.57
HDAC9-225ENST00000490851 ASTN2O75129 1339 aaPredicted RBP11.51□□□□□ -0.57
HDAC9-225ENST00000490851 PPP6R2O75170 966 aa11.51□□□□□ -0.57
HDAC9-225ENST00000490851 CCDC192P0DO97 292 aa11.51□□□□□ -0.57
HDAC9-225ENST00000490851 CALML3P27482 149 aa11.51□□□□□ -0.57
HDAC9-225ENST00000490851 TYRO3Q06418 890 aa11.51□□□□□ -0.57
HDAC9-225ENST00000490851 TTC38Q5R3I4 469 aa11.51□□□□□ -0.57
HDAC9-225ENST00000490851 ARHGAP27Q6ZUM4 889 aa11.51□□□□□ -0.57
HDAC9-225ENST00000490851 TMEM179Q6ZVK1 233 aa11.51□□□□□ -0.57
HDAC9-225ENST00000490851 MICALL2Q8IY33 904 aa11.51□□□□□ -0.57
HDAC9-225ENST00000490851 KRI1Q8N9T8 703 aaKnown RBP11.51□□□□□ -0.57
HDAC9-225ENST00000490851 SDF4Q9BRK5 362 aa11.51□□□□□ -0.57
HDAC9-225ENST00000490851 KANSL2Q9H9L4 492 aa11.51□□□□□ -0.57
HDAC9-225ENST00000490851 PCDHA4Q9UN74 947 aa11.51□□□□□ -0.57
HDAC9-225ENST00000490851 ADGRF4Q8IZF3 695 aa11.5□□□□□ -0.57
HDAC9-225ENST00000490851 CCDC148Q8NFR7 591 aa11.5□□□□□ -0.57
HDAC9-225ENST00000490851 COA7Q96BR5 231 aa11.5□□□□□ -0.57
HDAC9-225ENST00000490851 FUCA2Q9BTY2 467 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms