RNA–Protein interactions for RNA: ENST00000490733.1

EPCAM-206, Transcript of epithelial cell adhesion molecule, humanhuman

TSL 3

Gene EPCAM, Length 752 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPCAM-206ENST00000490733 USP17L11C9JVI0 530 aa5.86□□□□□ -1.47
EPCAM-206ENST00000490733 USP17L21D6R901 530 aa5.86□□□□□ -1.47
EPCAM-206ENST00000490733 USP17L18D6R9N7 530 aa5.86□□□□□ -1.47
EPCAM-206ENST00000490733 USP17L22D6RA61 530 aa5.86□□□□□ -1.47
EPCAM-206ENST00000490733 USP17L17D6RBQ6 530 aa5.86□□□□□ -1.47
EPCAM-206ENST00000490733 USP17L19D6RCP7 530 aa5.86□□□□□ -1.47
EPCAM-206ENST00000490733 USP17L20D6RJB6 530 aa5.86□□□□□ -1.47
EPCAM-206ENST00000490733 NFKBIEO00221 500 aa5.86□□□□□ -1.47
EPCAM-206ENST00000490733 SGSM2O43147 1006 aa5.86□□□□□ -1.47
EPCAM-206ENST00000490733 CD33P20138 364 aa5.86□□□□□ -1.47
EPCAM-206ENST00000490733 ADD2P35612 726 aa5.86□□□□□ -1.47
EPCAM-206ENST00000490733 SEC13P55735 322 aa5.86□□□□□ -1.47
EPCAM-206ENST00000490733 USP17L24Q0WX57 530 aa5.86□□□□□ -1.47
EPCAM-206ENST00000490733 AOC3Q16853 763 aa5.86□□□□□ -1.47
EPCAM-206ENST00000490733 CCDC93Q567U6 631 aa5.86□□□□□ -1.47
EPCAM-206ENST00000490733 DALRD3Q5D0E6 543 aaKnown RBP5.86□□□□□ -1.47
EPCAM-206ENST00000490733 CWC27Q6UX04 472 aaKnown RBP5.86□□□□□ -1.47
EPCAM-206ENST00000490733 ZNF589Q86UQ0 364 aaPredicted RBP5.86□□□□□ -1.47
EPCAM-206ENST00000490733 NEDD1Q8NHV4 660 aa5.86□□□□□ -1.47
EPCAM-206ENST00000490733 OSBP2Q969R2 916 aa5.86□□□□□ -1.47
EPCAM-206ENST00000490733 SEC62Q99442 399 aaKnown RBP5.86□□□□□ -1.47
EPCAM-206ENST00000490733 KRTAP4-2Q9BYR5 136 aa5.86□□□□□ -1.47
EPCAM-206ENST00000490733 KCNQ5Q9NR82 932 aa5.86□□□□□ -1.47
EPCAM-206ENST00000490733 DENND2AQ9ULE3 1009 aa5.86□□□□□ -1.47
EPCAM-206ENST00000490733 GJA3Q9Y6H8 435 aa5.86□□□□□ -1.47
EPCAM-206ENST00000490733 MAST3O60307 1309 aa5.85□□□□□ -1.47
EPCAM-206ENST00000490733 FAM205AQ6ZU69 1335 aa5.85□□□□□ -1.47
EPCAM-206ENST00000490733 CNTNAP5Q8WYK1 1306 aa5.85□□□□□ -1.47
EPCAM-206ENST00000490733 SALL1Q9NSC2 1324 aa5.85□□□□□ -1.47
EPCAM-206ENST00000490733 FAM196BA6NMK8 535 aa5.85□□□□□ -1.47
EPCAM-206ENST00000490733 YDJCA8MPS7 323 aa5.85□□□□□ -1.47
EPCAM-206ENST00000490733 M0R2C6 588 aa5.85□□□□□ -1.47
EPCAM-206ENST00000490733 FOXP2O15409 715 aa5.85□□□□□ -1.47
EPCAM-206ENST00000490733 RNF113AO15541 343 aaKnown RBP5.85□□□□□ -1.47
EPCAM-206ENST00000490733 LGR5O75473 907 aa5.85□□□□□ -1.47
EPCAM-206ENST00000490733 ITGB2P05107 769 aa5.85□□□□□ -1.47
EPCAM-206ENST00000490733 FAM157BP0CG42 384 aa5.85□□□□□ -1.47
EPCAM-206ENST00000490733 PDE6AP16499 860 aa5.85□□□□□ -1.47
EPCAM-206ENST00000490733 PRDX5P30044 214 aa5.85□□□□□ -1.47
EPCAM-206ENST00000490733 HIRAP54198 1017 aaPredicted RBP5.85□□□□□ -1.47
EPCAM-206ENST00000490733 MFAP1P55081 439 aaKnown RBP5.85□□□□□ -1.47
EPCAM-206ENST00000490733 PTH1RQ03431 593 aa5.85□□□□□ -1.47
EPCAM-206ENST00000490733 KIAA2012Q0VF49 1180 aa5.85□□□□□ -1.47
EPCAM-206ENST00000490733 DPYDQ12882 1025 aa5.85□□□□□ -1.47
EPCAM-206ENST00000490733 CHAF1AQ13111 956 aaPredicted RBP5.85□□□□□ -1.47
EPCAM-206ENST00000490733 ZMYM1Q5SVZ6 1142 aa5.85□□□□□ -1.47
EPCAM-206ENST00000490733 SAMD5Q5TGI4 173 aa5.85□□□□□ -1.47
EPCAM-206ENST00000490733 LRRC69Q6ZNQ3 347 aa5.85□□□□□ -1.47
EPCAM-206ENST00000490733 CCDC129Q6ZRS4 1044 aa5.85□□□□□ -1.47
EPCAM-206ENST00000490733 ZNF804AQ7Z570 1209 aa5.85□□□□□ -1.47
EPCAM-206ENST00000490733 ADGRA1Q86SQ6 560 aa5.85□□□□□ -1.47
EPCAM-206ENST00000490733 TICAM2Q86XR7 235 aa5.85□□□□□ -1.47
EPCAM-206ENST00000490733 VPS37DQ86XT2 251 aa5.85□□□□□ -1.47
EPCAM-206ENST00000490733 RTKN2Q8IZC4 609 aa5.85□□□□□ -1.47
EPCAM-206ENST00000490733 CERS5Q8N5B7 392 aa5.85□□□□□ -1.47
EPCAM-206ENST00000490733 PSMD1Q99460 953 aa5.85□□□□□ -1.47
EPCAM-206ENST00000490733 SYT17Q9BSW7 474 aa5.85□□□□□ -1.47
EPCAM-206ENST00000490733 MXD3Q9BW11 206 aa5.85□□□□□ -1.47
EPCAM-206ENST00000490733 USP26Q9BXU7 913 aa5.85□□□□□ -1.47
EPCAM-206ENST00000490733 ZC3H12CQ9C0D7 883 aaKnown RBP5.85□□□□□ -1.47
EPCAM-206ENST00000490733 COA1Q9GZY4 146 aa5.85□□□□□ -1.47
EPCAM-206ENST00000490733 LSG1Q9H089 658 aaKnown RBP5.85□□□□□ -1.47
EPCAM-206ENST00000490733 PUS7LQ9H0K6 701 aaKnown RBP5.85□□□□□ -1.47
EPCAM-206ENST00000490733 VRTNQ9H8Y1 702 aa5.85□□□□□ -1.47
EPCAM-206ENST00000490733 DBNDD1Q9H9R9 158 aa5.85□□□□□ -1.47
EPCAM-206ENST00000490733 ZNF277Q9NRM2 450 aaPredicted RBP5.85□□□□□ -1.47
EPCAM-206ENST00000490733 GNL3LQ9NVN8 582 aaKnown RBP5.85□□□□□ -1.47
EPCAM-206ENST00000490733 GDF2Q9UK05 429 aaPredicted RBP5.85□□□□□ -1.47
EPCAM-206ENST00000490733 BCS1LQ9Y276 419 aa5.85□□□□□ -1.47
EPCAM-206ENST00000490733 HCN4Q9Y3Q4 1203 aa5.85□□□□□ -1.47
EPCAM-206ENST00000490733 BAZ2AQ9UIF9 1905 aaKnown RBP5.85□□□□□ -1.47
EPCAM-206ENST00000490733 LAMA4Q16363 1823 aa5.85□□□□□ -1.47
EPCAM-206ENST00000490733 FOCADQ5VW36 1801 aa5.85□□□□□ -1.47
EPCAM-206ENST00000490733 ZNF532Q9HCE3 1301 aa5.84□□□□□ -1.47
EPCAM-206ENST00000490733 ECM29Q5VYK3 1845 aa5.84□□□□□ -1.47
EPCAM-206ENST00000490733 PHF20L1A8MW92 1017 aa5.84□□□□□ -1.47
EPCAM-206ENST00000490733 EFSO43281 561 aa5.84□□□□□ -1.47
EPCAM-206ENST00000490733 PPP1R12BO60237 982 aaPredicted RBP5.84□□□□□ -1.47
EPCAM-206ENST00000490733 ECE2O60344 883 aa5.84□□□□□ -1.47
EPCAM-206ENST00000490733 IDH1O75874 414 aaKnown RBP5.84□□□□□ -1.47
EPCAM-206ENST00000490733 TTF1Q15361 905 aaPredicted RBP5.84□□□□□ -1.47
EPCAM-206ENST00000490733 UBE3CQ15386 1083 aa5.84□□□□□ -1.47
EPCAM-206ENST00000490733 MCMDC2Q4G0Z9 681 aa5.84□□□□□ -1.47
EPCAM-206ENST00000490733 SLC9C2Q5TAH2 1124 aa5.84□□□□□ -1.47
EPCAM-206ENST00000490733 VPS53Q5VIR6 699 aa5.84□□□□□ -1.47
EPCAM-206ENST00000490733 ANKMY2Q8IV38 441 aa5.84□□□□□ -1.47
EPCAM-206ENST00000490733 MAGEB6Q8N7X4 407 aa5.84□□□□□ -1.47
EPCAM-206ENST00000490733 GOLGA6L1Q8N7Z2 621 aa5.84□□□□□ -1.47
EPCAM-206ENST00000490733 EDARADDQ8WWZ3 215 aa5.84□□□□□ -1.47
EPCAM-206ENST00000490733 SCG3Q8WXD2 468 aaKnown RBP5.84□□□□□ -1.47
EPCAM-206ENST00000490733 APPBP2Q92624 585 aa5.84□□□□□ -1.47
EPCAM-206ENST00000490733 NSUN4Q96CB9 384 aaKnown RBP5.84□□□□□ -1.47
EPCAM-206ENST00000490733 TBC1D32Q96NH3 1257 aa5.84□□□□□ -1.47
EPCAM-206ENST00000490733 EYA3Q99504 573 aa5.84□□□□□ -1.47
EPCAM-206ENST00000490733 KIF2CQ99661 725 aa5.84□□□□□ -1.47
EPCAM-206ENST00000490733 PHACTR1Q9C0D0 580 aa5.84□□□□□ -1.47
EPCAM-206ENST00000490733 TMX4Q9H1E5 349 aaPredicted RBP5.84□□□□□ -1.47
EPCAM-206ENST00000490733 HELLSQ9NRZ9 838 aa5.84□□□□□ -1.47
EPCAM-206ENST00000490733 DIAPH3Q9NSV4 1193 aa5.84□□□□□ -1.47
EPCAM-206ENST00000490733 ABCF2Q9UG63 623 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms