RNA–Protein interactions for RNA: ENST00000490696.5

VPS26A-207, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 800 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-207ENST00000490696 RIOX2Q8IUF8 465 aa18.1■□□□□ 0.49
VPS26A-207ENST00000490696 DCAF4Q8WV16 495 aa18.1■□□□□ 0.49
VPS26A-207ENST00000490696 KIFC2Q96AC6 838 aa18.1■□□□□ 0.49
VPS26A-207ENST00000490696 ZSCAN10Q96SZ4 725 aaPredicted RBP18.1■□□□□ 0.49
VPS26A-207ENST00000490696 MROH8Q9H579 483 aa18.1■□□□□ 0.49
VPS26A-207ENST00000490696 SLC38A10Q9HBR0 1119 aa18.1■□□□□ 0.49
VPS26A-207ENST00000490696 CWC22Q9HCG8 908 aaKnown RBP18.1■□□□□ 0.49
VPS26A-207ENST00000490696 POTEFA5A3E0 1075 aa18.09■□□□□ 0.49
VPS26A-207ENST00000490696 ATP2A1O14983 1001 aa18.09■□□□□ 0.49
VPS26A-207ENST00000490696 SLC25A27O95847 323 aa18.09■□□□□ 0.49
VPS26A-207ENST00000490696 MYCP01106 439 aaPredicted RBP18.09■□□□□ 0.49
VPS26A-207ENST00000490696 INHAP05111 366 aa18.09■□□□□ 0.49
VPS26A-207ENST00000490696 RGS2P41220 211 aa18.09■□□□□ 0.49
VPS26A-207ENST00000490696 MAP2K5Q13163 448 aa18.09■□□□□ 0.49
VPS26A-207ENST00000490696 PRPF38BQ5VTL8 546 aaKnown RBP18.09■□□□□ 0.49
VPS26A-207ENST00000490696 STOX1Q6ZVD7 989 aa18.09■□□□□ 0.49
VPS26A-207ENST00000490696 CYB5R4Q7L1T6 521 aa18.09■□□□□ 0.49
VPS26A-207ENST00000490696 FAM160B2Q86V87 743 aa18.09■□□□□ 0.49
VPS26A-207ENST00000490696 ENAHQ8N8S7 591 aaPredicted RBP18.09■□□□□ 0.49
VPS26A-207ENST00000490696 CHURC1Q8WUH1 139 aa18.09■□□□□ 0.49
VPS26A-207ENST00000490696 ANO2Q9NQ90 1003 aa18.09■□□□□ 0.49
VPS26A-207ENST00000490696 BIN2Q9UBW5 565 aaPredicted RBP18.09■□□□□ 0.49
VPS26A-207ENST00000490696 MTMR7Q9Y216 660 aa18.09■□□□□ 0.49
VPS26A-207ENST00000490696 IVNS1ABPQ9Y6Y0 642 aa18.09■□□□□ 0.49
VPS26A-207ENST00000490696 TNKSO95271 1327 aa18.08■□□□□ 0.49
VPS26A-207ENST00000490696 E7EWF7 191 aa18.08■□□□□ 0.48
VPS26A-207ENST00000490696 STRNO43815 780 aa18.08■□□□□ 0.48
VPS26A-207ENST00000490696 ZBED4O75132 1171 aa18.08■□□□□ 0.48
VPS26A-207ENST00000490696 SNHG28P0DPA3 235 aa18.08■□□□□ 0.48
VPS26A-207ENST00000490696 PDHBP11177 359 aa18.08■□□□□ 0.48
VPS26A-207ENST00000490696 UBXN2AP68543 259 aa18.08■□□□□ 0.48
VPS26A-207ENST00000490696 TRDNQ13061 729 aa18.08■□□□□ 0.48
VPS26A-207ENST00000490696 CCDC96Q2M329 555 aa18.08■□□□□ 0.48
VPS26A-207ENST00000490696 CASC1Q6TDU7 716 aa18.08■□□□□ 0.48
VPS26A-207ENST00000490696 NCAPG2Q86XI2 1143 aa18.08■□□□□ 0.48
VPS26A-207ENST00000490696 TRIB2Q92519 343 aa18.08■□□□□ 0.48
VPS26A-207ENST00000490696 APBA2Q99767 749 aa18.08■□□□□ 0.48
VPS26A-207ENST00000490696 TEX13BQ9BXU2 312 aa18.08■□□□□ 0.48
VPS26A-207ENST00000490696 ISY1Q9ULR0 285 aaKnown RBP18.08■□□□□ 0.48
VPS26A-207ENST00000490696 RBBP6Q7Z6E9 1792 aaKnown RBP18.07■□□□□ 0.48
VPS26A-207ENST00000490696 HMGCRP04035 888 aa18.07■□□□□ 0.48
VPS26A-207ENST00000490696 HOXC6P09630 235 aa18.07■□□□□ 0.48
VPS26A-207ENST00000490696 FDX1P10109 184 aa18.07■□□□□ 0.48
VPS26A-207ENST00000490696 COPB2P35606 906 aa18.07■□□□□ 0.48
VPS26A-207ENST00000490696 NECTIN1Q15223 517 aa18.07■□□□□ 0.48
VPS26A-207ENST00000490696 BTNL9Q6UXG8 535 aa18.07■□□□□ 0.48
VPS26A-207ENST00000490696 ABRAQ8N0Z2 381 aa18.07■□□□□ 0.48
VPS26A-207ENST00000490696 UBAC1Q9BSL1 405 aa18.07■□□□□ 0.48
VPS26A-207ENST00000490696 TMEM106CQ9BVX2 250 aa18.07■□□□□ 0.48
VPS26A-207ENST00000490696 RIPK3Q9Y572 518 aa18.07■□□□□ 0.48
VPS26A-207ENST00000490696 ZNF236Q9UL36 1845 aa18.07■□□□□ 0.48
VPS26A-207ENST00000490696 SLC27A2O14975 620 aa18.06■□□□□ 0.48
VPS26A-207ENST00000490696 CCL5P13501 91 aa18.06■□□□□ 0.48
VPS26A-207ENST00000490696 ADORA2AP29274 412 aa18.06■□□□□ 0.48
VPS26A-207ENST00000490696 OAZ1P54368 228 aa18.06■□□□□ 0.48
VPS26A-207ENST00000490696 ZNF543Q08ER8 600 aa18.06■□□□□ 0.48
VPS26A-207ENST00000490696 IKQ13123 557 aaPredicted RBP18.06■□□□□ 0.48
VPS26A-207ENST00000490696 SEC23AQ15436 765 aa18.06■□□□□ 0.48
VPS26A-207ENST00000490696 CCL14Q16627 93 aa18.06■□□□□ 0.48
VPS26A-207ENST00000490696 SNRNP48Q6IEG0 339 aaKnown RBP18.06■□□□□ 0.48
VPS26A-207ENST00000490696 TTBK2Q6IQ55 1244 aa18.06■□□□□ 0.48
VPS26A-207ENST00000490696 CPXCR1Q8N123 301 aa18.06■□□□□ 0.48
VPS26A-207ENST00000490696 PNMA1Q8ND90 353 aa18.06■□□□□ 0.48
VPS26A-207ENST00000490696 NCOA7Q8NI08 942 aa18.06■□□□□ 0.48
VPS26A-207ENST00000490696 RAVER2Q9HCJ3 691 aaKnown RBP18.06■□□□□ 0.48
VPS26A-207ENST00000490696 PRR12Q9ULL5 1215 aa18.06■□□□□ 0.48
VPS26A-207ENST00000490696 ZNF536O15090 1300 aa18.05■□□□□ 0.48
VPS26A-207ENST00000490696 FRMPD2Q68DX3 1309 aaPredicted RBP18.05■□□□□ 0.48
VPS26A-207ENST00000490696 COBLO75128 1261 aa18.05■□□□□ 0.48
VPS26A-207ENST00000490696 ZKSCAN1P17029 563 aaPredicted RBP18.05■□□□□ 0.48
VPS26A-207ENST00000490696 TRIM32Q13049 653 aa18.05■□□□□ 0.48
VPS26A-207ENST00000490696 CREB3L3Q68CJ9 461 aa18.05■□□□□ 0.48
VPS26A-207ENST00000490696 RALYLQ86SE5 291 aaKnown RBP18.05■□□□□ 0.48
VPS26A-207ENST00000490696 MB21D2Q8IYB1 491 aaPredicted RBP18.05■□□□□ 0.48
VPS26A-207ENST00000490696 TRMT44Q8IYL2 757 aaKnown RBP18.05■□□□□ 0.48
VPS26A-207ENST00000490696 NPLOC4Q8TAT6 608 aa18.05■□□□□ 0.48
VPS26A-207ENST00000490696 RNF208Q9H0X6 261 aa18.05■□□□□ 0.48
VPS26A-207ENST00000490696 UNC93B1Q9H1C4 597 aa18.05■□□□□ 0.48
VPS26A-207ENST00000490696 KAT14Q9H8E8 782 aa18.05■□□□□ 0.48
VPS26A-207ENST00000490696 CTDP1Q9Y5B0 961 aaPredicted RBP18.05■□□□□ 0.48
VPS26A-207ENST00000490696 IGHA2P01877 340 aa18.04■□□□□ 0.48
VPS26A-207ENST00000490696 FCER1AP12319 257 aa18.04■□□□□ 0.48
VPS26A-207ENST00000490696 EN2P19622 333 aaPredicted RBP18.04■□□□□ 0.48
VPS26A-207ENST00000490696 SLC16A2P36021 539 aa18.04■□□□□ 0.48
VPS26A-207ENST00000490696 MAP3K21Q5TCX8 1036 aa18.04■□□□□ 0.48
VPS26A-207ENST00000490696 GPCPD1Q9NPB8 672 aa18.04■□□□□ 0.48
VPS26A-207ENST00000490696 FLRT1Q9NZU1 646 aa18.04■□□□□ 0.48
VPS26A-207ENST00000490696 GJB1P08034 283 aa18.03■□□□□ 0.48
VPS26A-207ENST00000490696 ANTXR2P58335 489 aa18.03■□□□□ 0.48
VPS26A-207ENST00000490696 IFIT1BQ5T764 474 aaKnown RBP18.03■□□□□ 0.48
VPS26A-207ENST00000490696 SYDE2Q5VT97 1194 aa18.03■□□□□ 0.48
VPS26A-207ENST00000490696 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.03■□□□□ 0.48
VPS26A-207ENST00000490696 DPP9Q86TI2 863 aa18.03■□□□□ 0.48
VPS26A-207ENST00000490696 MMP19Q99542 508 aa18.03■□□□□ 0.48
VPS26A-207ENST00000490696 RANBP17Q9H2T7 1088 aaKnown RBP18.03■□□□□ 0.48
VPS26A-207ENST00000490696 PAK6Q9NQU5 681 aaPredicted RBP18.03■□□□□ 0.48
VPS26A-207ENST00000490696 PRKAR2AP13861 404 aaKnown RBP18.02■□□□□ 0.48
VPS26A-207ENST00000490696 SNAP25P60880 206 aa18.02■□□□□ 0.48
VPS26A-207ENST00000490696 GPATCH4Q5T3I0 446 aaKnown RBP18.02■□□□□ 0.48
VPS26A-207ENST00000490696 CHST3Q7LGC8 479 aa18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms