RNA–Protein interactions for RNA: ENST00000490476.1

SSX2IP-208, Transcript of SSX family member 2 interacting protein, humanhuman

TSL 3

Gene SSX2IP, Length 716 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-208ENST00000490476 GNPTABQ3T906 1256 aa6.93□□□□□ -1.3
SSX2IP-208ENST00000490476 CDCP2Q5VXM1 449 aa6.93□□□□□ -1.3
SSX2IP-208ENST00000490476 KIAA1211LQ6NV74 962 aa6.93□□□□□ -1.3
SSX2IP-208ENST00000490476 FDX2Q6P4F2 183 aa6.93□□□□□ -1.3
SSX2IP-208ENST00000490476 LINC00114Q6XXX2 140 aa6.93□□□□□ -1.3
SSX2IP-208ENST00000490476 HID1Q8IV36 788 aa6.93□□□□□ -1.3
SSX2IP-208ENST00000490476 RNF214Q8ND24 703 aa6.93□□□□□ -1.3
SSX2IP-208ENST00000490476 XAGE3Q8WTP9 111 aa6.93□□□□□ -1.3
SSX2IP-208ENST00000490476 KIF2CQ99661 725 aa6.93□□□□□ -1.3
SSX2IP-208ENST00000490476 ATXN3LQ9H3M9 355 aa6.93□□□□□ -1.3
SSX2IP-208ENST00000490476 USP19O94966 1318 aa6.93□□□□□ -1.3
SSX2IP-208ENST00000490476 PREX2Q70Z35 1606 aa6.93□□□□□ -1.3
SSX2IP-208ENST00000490476 PARD3Q8TEW0 1356 aa6.93□□□□□ -1.3
SSX2IP-208ENST00000490476 ARHGAP35Q9NRY4 1499 aa6.92□□□□□ -1.3
SSX2IP-208ENST00000490476 GNB5O14775 395 aa6.92□□□□□ -1.3
SSX2IP-208ENST00000490476 ALX3O95076 343 aa6.92□□□□□ -1.3
SSX2IP-208ENST00000490476 NEFMP07197 916 aa6.92□□□□□ -1.3
SSX2IP-208ENST00000490476 HSD3B2P26439 372 aa6.92□□□□□ -1.3
SSX2IP-208ENST00000490476 SOX4Q06945 474 aaPredicted RBP6.92□□□□□ -1.3
SSX2IP-208ENST00000490476 NKG7Q16617 165 aa6.92□□□□□ -1.3
SSX2IP-208ENST00000490476 INTS3Q68E01 1043 aaKnown RBP6.92□□□□□ -1.3
SSX2IP-208ENST00000490476 MRM1Q6IN84 353 aaKnown RBP6.92□□□□□ -1.3
SSX2IP-208ENST00000490476 SHISA2Q6UWI4 295 aa6.92□□□□□ -1.3
SSX2IP-208ENST00000490476 SPATC1Q76KD6 591 aa6.92□□□□□ -1.3
SSX2IP-208ENST00000490476 UBE3DQ7Z6J8 389 aa6.92□□□□□ -1.3
SSX2IP-208ENST00000490476 MCATQ8IVS2 390 aaKnown RBP6.92□□□□□ -1.3
SSX2IP-208ENST00000490476 TAB3Q8N5C8 712 aaPredicted RBP6.92□□□□□ -1.3
SSX2IP-208ENST00000490476 SMG8Q8ND04 991 aaKnown RBP6.92□□□□□ -1.3
SSX2IP-208ENST00000490476 MRPL18Q9H0U6 180 aaKnown RBP6.92□□□□□ -1.3
SSX2IP-208ENST00000490476 PHAXQ9H814 394 aaKnown RBP6.92□□□□□ -1.3
SSX2IP-208ENST00000490476 FANCLQ9NW38 375 aa6.92□□□□□ -1.3
SSX2IP-208ENST00000490476 KDM2BQ8NHM5 1336 aa6.92□□□□□ -1.3
SSX2IP-208ENST00000490476 ESYT3A0FGR9 886 aa6.91□□□□□ -1.3
SSX2IP-208ENST00000490476 MEGF11A6BM72 1044 aa6.91□□□□□ -1.3
SSX2IP-208ENST00000490476 TNFRSF10CO14798 259 aa6.91□□□□□ -1.3
SSX2IP-208ENST00000490476 DIAPH1O60610 1272 aaKnown RBP6.91□□□□□ -1.3
SSX2IP-208ENST00000490476 IGHA1P01876 353 aa6.91□□□□□ -1.3
SSX2IP-208ENST00000490476 TP53P04637 393 aaPredicted RBP6.91□□□□□ -1.3
SSX2IP-208ENST00000490476 HSPA1AP0DMV8 641 aaKnown RBP6.91□□□□□ -1.3
SSX2IP-208ENST00000490476 HSPA1BP0DMV9 641 aaKnown RBP6.91□□□□□ -1.3
SSX2IP-208ENST00000490476 GBP1P32455 592 aa6.91□□□□□ -1.3
SSX2IP-208ENST00000490476 NTF4P34130 210 aa6.91□□□□□ -1.3
SSX2IP-208ENST00000490476 SSRP1Q08945 709 aaKnown RBP6.91□□□□□ -1.3
SSX2IP-208ENST00000490476 GRIK4Q16099 956 aa6.91□□□□□ -1.3
SSX2IP-208ENST00000490476 GPR162Q16538 588 aa6.91□□□□□ -1.3
SSX2IP-208ENST00000490476 NBPF8Q3BBV2 869 aa6.91□□□□□ -1.3
SSX2IP-208ENST00000490476 PRRT3Q5FWE3 981 aa6.91□□□□□ -1.3
SSX2IP-208ENST00000490476 SLC6A19Q695T7 634 aa6.91□□□□□ -1.3
SSX2IP-208ENST00000490476 IGF2-ASQ6U949 168 aa6.91□□□□□ -1.3
SSX2IP-208ENST00000490476 ISL2Q96A47 359 aa6.91□□□□□ -1.3
SSX2IP-208ENST00000490476 MKL2Q9ULH7 1088 aa6.91□□□□□ -1.3
SSX2IP-208ENST00000490476 SYNGAP1Q96PV0 1343 aa6.91□□□□□ -1.3
SSX2IP-208ENST00000490476 TET3O43151 1660 aa6.9□□□□□ -1.3
SSX2IP-208ENST00000490476 CDC45O75419 566 aa6.9□□□□□ -1.3
SSX2IP-208ENST00000490476 ELNP15502 786 aa6.9□□□□□ -1.3
SSX2IP-208ENST00000490476 RAB6AP20340 208 aa6.9□□□□□ -1.3
SSX2IP-208ENST00000490476 SLC7A5Q01650 507 aa6.9□□□□□ -1.3
SSX2IP-208ENST00000490476 NCAPHQ15003 741 aa6.9□□□□□ -1.3
SSX2IP-208ENST00000490476 PRAMEF13Q5VWM6 474 aa6.9□□□□□ -1.3
SSX2IP-208ENST00000490476 TDRD10Q5VZ19 366 aaKnown RBP6.9□□□□□ -1.3
SSX2IP-208ENST00000490476 EEPD1Q7L9B9 569 aa6.9□□□□□ -1.3
SSX2IP-208ENST00000490476 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.9□□□□□ -1.3
SSX2IP-208ENST00000490476 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.9□□□□□ -1.3
SSX2IP-208ENST00000490476 BAHD1Q8TBE0 780 aaPredicted RBP6.9□□□□□ -1.3
SSX2IP-208ENST00000490476 CAMKK2Q96RR4 588 aa6.9□□□□□ -1.3
SSX2IP-208ENST00000490476 SUGCTQ9HAC7 445 aa6.9□□□□□ -1.3
SSX2IP-208ENST00000490476 LGR6Q9HBX8 967 aa6.9□□□□□ -1.3
SSX2IP-208ENST00000490476 LEMD3Q9Y2U8 911 aa6.9□□□□□ -1.3
SSX2IP-208ENST00000490476 ACTL7BQ9Y614 415 aa6.9□□□□□ -1.3
SSX2IP-208ENST00000490476 NCOA3Q9Y6Q9 1424 aa6.9□□□□□ -1.31
SSX2IP-208ENST00000490476 TMEM131LA2VDJ0 1609 aa6.9□□□□□ -1.31
SSX2IP-208ENST00000490476 PIK3R2O00459 728 aa6.89□□□□□ -1.31
SSX2IP-208ENST00000490476 SART1O43290 800 aaKnown RBP6.89□□□□□ -1.31
SSX2IP-208ENST00000490476 SLBPQ14493 270 aaKnown RBP eCLIP6.89□□□□□ -1.31
SSX2IP-208ENST00000490476 MRPL41Q8IXM3 137 aaKnown RBP6.89□□□□□ -1.31
SSX2IP-208ENST00000490476 SLFN12Q8IYM2 578 aa6.89□□□□□ -1.31
SSX2IP-208ENST00000490476 SMYD4Q8IYR2 804 aaPredicted RBP6.89□□□□□ -1.31
SSX2IP-208ENST00000490476 KCT2Q8NC54 265 aa6.89□□□□□ -1.31
SSX2IP-208ENST00000490476 CCDC74BQ96LY2 380 aa6.89□□□□□ -1.31
SSX2IP-208ENST00000490476 SLC6A18Q96N87 628 aa6.89□□□□□ -1.31
SSX2IP-208ENST00000490476 CWC22Q9HCG8 908 aaKnown RBP6.89□□□□□ -1.31
SSX2IP-208ENST00000490476 FAM105AQ9NUU6 356 aa6.89□□□□□ -1.31
SSX2IP-208ENST00000490476 ZMYM5Q9UJ78 669 aa6.89□□□□□ -1.31
SSX2IP-208ENST00000490476 LAMC1P11047 1609 aa6.89□□□□□ -1.31
SSX2IP-208ENST00000490476 LOC100996750A0A140TA64 210 aa6.88□□□□□ -1.31
SSX2IP-208ENST00000490476 F8W735 103 aaPredicted RBP6.88□□□□□ -1.31
SSX2IP-208ENST00000490476 ENPP3O14638 875 aa6.88□□□□□ -1.31
SSX2IP-208ENST00000490476 RGS13O14921 159 aa6.88□□□□□ -1.31
SSX2IP-208ENST00000490476 GAS2O43903 313 aaKnown RBP6.88□□□□□ -1.31
SSX2IP-208ENST00000490476 TIAF1O95411 115 aa6.88□□□□□ -1.31
SSX2IP-208ENST00000490476 GLB1P16278 677 aa6.88□□□□□ -1.31
SSX2IP-208ENST00000490476 ATF3P18847 181 aa6.88□□□□□ -1.31
SSX2IP-208ENST00000490476 USP11P51784 963 aa6.88□□□□□ -1.31
SSX2IP-208ENST00000490476 ANKRD34AQ69YU3 496 aa6.88□□□□□ -1.31
SSX2IP-208ENST00000490476 HOMER1Q86YM7 354 aa6.88□□□□□ -1.31
SSX2IP-208ENST00000490476 TMEM192Q8IY95 271 aa6.88□□□□□ -1.31
SSX2IP-208ENST00000490476 BEND7Q8N7W2 519 aaPredicted RBP6.88□□□□□ -1.31
SSX2IP-208ENST00000490476 C2CD4AQ8NCU7 369 aaPredicted RBP6.88□□□□□ -1.31
SSX2IP-208ENST00000490476 ZNF526Q8TF50 670 aaPredicted RBP6.88□□□□□ -1.31
SSX2IP-208ENST00000490476 KLHL6Q8WZ60 621 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms