RNA–Protein interactions for RNA: ENST00000490475.1

TTC28-207, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 5

Gene TTC28, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-207ENST00000490475 TSPY8P0CW00 308 aa12.3□□□□□ -0.44
TTC28-207ENST00000490475 AKR1A1P14550 325 aa12.3□□□□□ -0.44
TTC28-207ENST00000490475 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.3□□□□□ -0.44
TTC28-207ENST00000490475 ZNF467Q7Z7K2 595 aaPredicted RBP12.3□□□□□ -0.44
TTC28-207ENST00000490475 IFNL3Q8IZI9 196 aa12.3□□□□□ -0.44
TTC28-207ENST00000490475 TRPV1Q8NER1 839 aa12.3□□□□□ -0.44
TTC28-207ENST00000490475 MTMR4Q9NYA4 1195 aa12.3□□□□□ -0.44
TTC28-207ENST00000490475 CLIP2Q9UDT6 1046 aa12.3□□□□□ -0.44
TTC28-207ENST00000490475 SYNGAP1Q96PV0 1343 aa12.3□□□□□ -0.44
TTC28-207ENST00000490475 SMCHD1A6NHR9 2005 aa12.3□□□□□ -0.44
TTC28-207ENST00000490475 SZT2Q5T011 3432 aa12.29□□□□□ -0.44
TTC28-207ENST00000490475 IGKV6D-41A0A0C4DH26 115 aa12.29□□□□□ -0.44
TTC28-207ENST00000490475 NDUFB10O96000 172 aa12.29□□□□□ -0.44
TTC28-207ENST00000490475 RTP1P59025 263 aa12.29□□□□□ -0.44
TTC28-207ENST00000490475 SNX17Q15036 470 aa12.29□□□□□ -0.44
TTC28-207ENST00000490475 LRRC41Q15345 812 aa12.29□□□□□ -0.44
TTC28-207ENST00000490475 ZNF792Q3KQV3 632 aa12.29□□□□□ -0.44
TTC28-207ENST00000490475 GJC2Q5T442 439 aaPredicted RBP12.29□□□□□ -0.44
TTC28-207ENST00000490475 SNRNP48Q6IEG0 339 aaKnown RBP12.29□□□□□ -0.44
TTC28-207ENST00000490475 SLC39A5Q6ZMH5 540 aa12.29□□□□□ -0.44
TTC28-207ENST00000490475 FAM160B2Q86V87 743 aa12.29□□□□□ -0.44
TTC28-207ENST00000490475 CHST13Q8NET6 341 aa12.29□□□□□ -0.44
TTC28-207ENST00000490475 REPS2Q8NFH8 660 aa12.29□□□□□ -0.44
TTC28-207ENST00000490475 NEDD1Q8NHV4 660 aa12.29□□□□□ -0.44
TTC28-207ENST00000490475 CHURC1Q8WUH1 139 aa12.29□□□□□ -0.44
TTC28-207ENST00000490475 EVI5LQ96CN4 794 aa12.29□□□□□ -0.44
TTC28-207ENST00000490475 SEC62Q99442 399 aaKnown RBP12.29□□□□□ -0.44
TTC28-207ENST00000490475 TSEN34Q9BSV6 310 aaKnown RBP12.29□□□□□ -0.44
TTC28-207ENST00000490475 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.29□□□□□ -0.44
TTC28-207ENST00000490475 OSBPL3Q9H4L5 887 aa12.29□□□□□ -0.44
TTC28-207ENST00000490475 XPNPEP3Q9NQH7 507 aa12.29□□□□□ -0.44
TTC28-207ENST00000490475 FBXO28Q9NVF7 368 aa12.29□□□□□ -0.44
TTC28-207ENST00000490475 TRIM6-TRIM34B2RNG4 842 aa12.28□□□□□ -0.44
TTC28-207ENST00000490475 M0R2C6 588 aa12.28□□□□□ -0.44
TTC28-207ENST00000490475 ATN1P54259 1190 aaPredicted RBP12.28□□□□□ -0.44
TTC28-207ENST00000490475 ZMYM1Q5SVZ6 1142 aa12.28□□□□□ -0.44
TTC28-207ENST00000490475 MAMDC4Q6UXC1 1216 aa12.28□□□□□ -0.44
TTC28-207ENST00000490475 NUP133Q8WUM0 1156 aa12.28□□□□□ -0.44
TTC28-207ENST00000490475 RILPL2Q969X0 211 aa12.28□□□□□ -0.44
TTC28-207ENST00000490475 CEP95Q96GE4 821 aa12.28□□□□□ -0.44
TTC28-207ENST00000490475 LRCH3Q96II8 777 aa12.28□□□□□ -0.44
TTC28-207ENST00000490475 SPC25Q9HBM1 224 aa12.28□□□□□ -0.44
TTC28-207ENST00000490475 SLC38A10Q9HBR0 1119 aa12.28□□□□□ -0.44
TTC28-207ENST00000490475 EPB41L4AQ9HCS5 686 aaPredicted RBP12.28□□□□□ -0.44
TTC28-207ENST00000490475 FAM184BQ9ULE4 1060 aa12.28□□□□□ -0.44
TTC28-207ENST00000490475 PHF24Q9UPV7 400 aa12.28□□□□□ -0.44
TTC28-207ENST00000490475 ATP11BQ9Y2G3 1177 aa12.28□□□□□ -0.44
TTC28-207ENST00000490475 LAMA3Q16787 3333 aa12.27□□□□□ -0.44
TTC28-207ENST00000490475 DNAH12Q6ZR08 3092 aa12.27□□□□□ -0.44
TTC28-207ENST00000490475 MOXD2PA6NHM9 499 aa12.27□□□□□ -0.45
TTC28-207ENST00000490475 SMIM22K7EJ46 135 aa12.27□□□□□ -0.45
TTC28-207ENST00000490475 SOX1O00570 391 aaPredicted RBP12.27□□□□□ -0.45
TTC28-207ENST00000490475 PLA2G6O60733 806 aa12.27□□□□□ -0.45
TTC28-207ENST00000490475 MYCNP04198 464 aaPredicted RBP12.27□□□□□ -0.45
TTC28-207ENST00000490475 BMP3P12645 472 aa12.27□□□□□ -0.45
TTC28-207ENST00000490475 STAT2P52630 851 aa12.27□□□□□ -0.45
TTC28-207ENST00000490475 MDM2Q00987 491 aaPredicted RBP12.27□□□□□ -0.45
TTC28-207ENST00000490475 PPARAQ07869 468 aa12.27□□□□□ -0.45
TTC28-207ENST00000490475 TKFCQ3LXA3 575 aa12.27□□□□□ -0.45
TTC28-207ENST00000490475 FAM47AQ5JRC9 791 aa12.27□□□□□ -0.45
TTC28-207ENST00000490475 FAM109BQ6ICB4 259 aaPredicted RBP12.27□□□□□ -0.45
TTC28-207ENST00000490475 ANKRD35Q8N283 1001 aa12.27□□□□□ -0.45
TTC28-207ENST00000490475 DEFB123Q8N688 67 aa12.27□□□□□ -0.45
TTC28-207ENST00000490475 GMCL1Q96IK5 515 aa12.27□□□□□ -0.45
TTC28-207ENST00000490475 TACC3Q9Y6A5 838 aa12.27□□□□□ -0.45
TTC28-207ENST00000490475 DNAJC25-GNG10A0A024R161 153 aa12.26□□□□□ -0.45
TTC28-207ENST00000490475 TSPY2A6NKD2 308 aa12.26□□□□□ -0.45
TTC28-207ENST00000490475 NEFLP07196 543 aa12.26□□□□□ -0.45
TTC28-207ENST00000490475 PGK2P07205 417 aa12.26□□□□□ -0.45
TTC28-207ENST00000490475 ADCYAP1R1P41586 468 aa12.26□□□□□ -0.45
TTC28-207ENST00000490475 SLC1A4P43007 532 aa12.26□□□□□ -0.45
TTC28-207ENST00000490475 NT5C2P49902 561 aa12.26□□□□□ -0.45
TTC28-207ENST00000490475 TFAP4Q01664 338 aa12.26□□□□□ -0.45
TTC28-207ENST00000490475 PRAMEF19Q5SWL8 479 aa12.26□□□□□ -0.45
TTC28-207ENST00000490475 SLFN13Q68D06 897 aa12.26□□□□□ -0.45
TTC28-207ENST00000490475 CPXCR1Q8N123 301 aa12.26□□□□□ -0.45
TTC28-207ENST00000490475 STK11IPQ8N1F8 1099 aa12.26□□□□□ -0.45
TTC28-207ENST00000490475 PCSK9Q8NBP7 692 aaKnown RBP12.26□□□□□ -0.45
TTC28-207ENST00000490475 KIFC2Q96AC6 838 aa12.26□□□□□ -0.45
TTC28-207ENST00000490475 ABHD16BQ9H3Z7 469 aa12.26□□□□□ -0.45
TTC28-207ENST00000490475 HELLSQ9NRZ9 838 aa12.26□□□□□ -0.45
TTC28-207ENST00000490475 PNMA2Q9UL42 364 aa12.26□□□□□ -0.45
TTC28-207ENST00000490475 MROH7Q68CQ1 1323 aa12.26□□□□□ -0.45
TTC28-207ENST00000490475 DUSP11O75319 330 aaKnown RBP12.25□□□□□ -0.45
TTC28-207ENST00000490475 PRDM1O75626 825 aa12.25□□□□□ -0.45
TTC28-207ENST00000490475 ZNF865P0CJ78 1059 aaPredicted RBP12.25□□□□□ -0.45
TTC28-207ENST00000490475 PCP11498 1178 aaKnown RBP12.25□□□□□ -0.45
TTC28-207ENST00000490475 MFAP1P55081 439 aaKnown RBP12.25□□□□□ -0.45
TTC28-207ENST00000490475 IKQ13123 557 aaPredicted RBP12.25□□□□□ -0.45
TTC28-207ENST00000490475 ANO1Q5XXA6 986 aa12.25□□□□□ -0.45
TTC28-207ENST00000490475 CCDC129Q6ZRS4 1044 aa12.25□□□□□ -0.45
TTC28-207ENST00000490475 SKAP1Q86WV1 359 aa12.25□□□□□ -0.45
TTC28-207ENST00000490475 STAG1Q8WVM7 1258 aa12.25□□□□□ -0.45
TTC28-207ENST00000490475 FAM227BQ96M60 508 aa12.25□□□□□ -0.45
TTC28-207ENST00000490475 TOX2Q96NM4 488 aa12.25□□□□□ -0.45
TTC28-207ENST00000490475 NUP88Q99567 741 aaPredicted RBP12.25□□□□□ -0.45
TTC28-207ENST00000490475 ACAD9Q9H845 621 aa12.25□□□□□ -0.45
TTC28-207ENST00000490475 ANAPC4Q9UJX5 808 aa12.25□□□□□ -0.45
TTC28-207ENST00000490475 STXBP5LQ9Y2K9 1186 aa12.25□□□□□ -0.45
TTC28-207ENST00000490475 ASB14A6NK59 587 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms