RNA–Protein interactions for RNA: ENST00000490444.2

PUM3-204, Transcript of pumilio RNA binding family member 3, human

TSL 5

Gene PUM3, Length 340 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PUM3-204	ENST00000490444	CDR1	P51861	262 aa		4.02	□□□□□ -1.77
PUM3-204	ENST00000490444	YBX1	P67809	324 aa	Known RBP	4.02	□□□□□ -1.77
PUM3-204	ENST00000490444	CAMK2G	Q13555	558 aa	Predicted RBP	4.02	□□□□□ -1.77
PUM3-204	ENST00000490444	SEPT6	Q14141	434 aa		4.02	□□□□□ -1.77
PUM3-204	ENST00000490444	CRIP3	Q6Q6R5	217 aa		4.02	□□□□□ -1.77
PUM3-204	ENST00000490444	USP51	Q70EK9	711 aa		4.02	□□□□□ -1.77
PUM3-204	ENST00000490444	HS2ST1	Q7LGA3	356 aa		4.02	□□□□□ -1.77
PUM3-204	ENST00000490444	CCDC84	Q86UT8	332 aa	Predicted RBP	4.02	□□□□□ -1.77
PUM3-204	ENST00000490444	SYTL4	Q96C24	671 aa	Predicted RBP	4.02	□□□□□ -1.77
PUM3-204	ENST00000490444	DUSP13	Q9UII6	198 aa		4.02	□□□□□ -1.77
PUM3-204	ENST00000490444	GGT7	Q9UJ14	662 aa		4.02	□□□□□ -1.77
PUM3-204	ENST00000490444	DDX41	Q9UJV9	622 aa	Known RBP	4.02	□□□□□ -1.77
PUM3-204	ENST00000490444	WASH4P	A8MWX3	477 aa		4.01	□□□□□ -1.77
PUM3-204	ENST00000490444	GFRA2	O00451	464 aa		4.01	□□□□□ -1.77
PUM3-204	ENST00000490444	ABLIM1	O14639	778 aa		4.01	□□□□□ -1.77
PUM3-204	ENST00000490444	FFAR3	O14843	346 aa		4.01	□□□□□ -1.77
PUM3-204	ENST00000490444	EIF5B	O60841	1220 aa	Known RBP	4.01	□□□□□ -1.77
PUM3-204	ENST00000490444	PGR	P06401	933 aa		4.01	□□□□□ -1.77
PUM3-204	ENST00000490444	TCF3	P15923	654 aa		4.01	□□□□□ -1.77
PUM3-204	ENST00000490444	ETV3	P41162	512 aa		4.01	□□□□□ -1.77
PUM3-204	ENST00000490444	DUSP4	Q13115	394 aa		4.01	□□□□□ -1.77
PUM3-204	ENST00000490444	HNRNPA0	Q13151	305 aa	Known RBP	4.01	□□□□□ -1.77
PUM3-204	ENST00000490444	ZNF394	Q53GI3	561 aa		4.01	□□□□□ -1.77
PUM3-204	ENST00000490444	C9orf131	Q5VYM1	1079 aa		4.01	□□□□□ -1.77
PUM3-204	ENST00000490444	FBXL19	Q6PCT2	694 aa		4.01	□□□□□ -1.77
PUM3-204	ENST00000490444	BNC2	Q6ZN30	1099 aa	Predicted RBP	4.01	□□□□□ -1.77
PUM3-204	ENST00000490444	NLRX1	Q86UT6	975 aa		4.01	□□□□□ -1.77
PUM3-204	ENST00000490444	FERMT3	Q86UX7	667 aa		4.01	□□□□□ -1.77
PUM3-204	ENST00000490444	IGDCC3	Q8IVU1	814 aa		4.01	□□□□□ -1.77
PUM3-204	ENST00000490444	RNF34	Q969K3	372 aa		4.01	□□□□□ -1.77
PUM3-204	ENST00000490444	RBM15	Q96T37	977 aa	Known RBP eCLIP	4.01	□□□□□ -1.77
PUM3-204	ENST00000490444	BCL11A	Q9H165	835 aa		4.01	□□□□□ -1.77
PUM3-204	ENST00000490444	PCED1A	Q9H1Q7	454 aa		4.01	□□□□□ -1.77
PUM3-204	ENST00000490444	USP40	Q9NVE5	1235 aa		4.01	□□□□□ -1.77
PUM3-204	ENST00000490444	TACC3	Q9Y6A5	838 aa		4.01	□□□□□ -1.77
PUM3-204	ENST00000490444		E9PSI1	815 aa		4	□□□□□ -1.77
PUM3-204	ENST00000490444	FZD7	O75084	574 aa		4	□□□□□ -1.77
PUM3-204	ENST00000490444	F13A1	P00488	732 aa		4	□□□□□ -1.77
PUM3-204	ENST00000490444	GBP2	P32456	591 aa	Predicted RBP	4	□□□□□ -1.77
PUM3-204	ENST00000490444	EIF4A3	P38919	411 aa	Known RBP	4	□□□□□ -1.77
PUM3-204	ENST00000490444	FAM160A1	Q05DH4	1040 aa		4	□□□□□ -1.77
PUM3-204	ENST00000490444	PDE4B	Q07343	736 aa		4	□□□□□ -1.77
PUM3-204	ENST00000490444	PWP1	Q13610	501 aa		4	□□□□□ -1.77
PUM3-204	ENST00000490444	SLC6A19	Q695T7	634 aa		4	□□□□□ -1.77
PUM3-204	ENST00000490444	NT5DC4	Q86YG4	428 aa		4	□□□□□ -1.77
PUM3-204	ENST00000490444	RELL1	Q8IUW5	271 aa		4	□□□□□ -1.77
PUM3-204	ENST00000490444	MRPL41	Q8IXM3	137 aa	Known RBP	4	□□□□□ -1.77
PUM3-204	ENST00000490444	TMEM87B	Q96K49	555 aa		4	□□□□□ -1.77
PUM3-204	ENST00000490444	SAMD11	Q96NU1	681 aa		4	□□□□□ -1.77
PUM3-204	ENST00000490444	DPH2	Q9BQC3	489 aa	Predicted RBP	4	□□□□□ -1.77
PUM3-204	ENST00000490444	CRTAC1	Q9NQ79	661 aa		4	□□□□□ -1.77
PUM3-204	ENST00000490444	GPATCH2	Q9NW75	528 aa		4	□□□□□ -1.77
PUM3-204	ENST00000490444	TJP2	Q9UDY2	1190 aa		4	□□□□□ -1.77
PUM3-204	ENST00000490444	PCDHGB7	Q9Y5F8	929 aa		4	□□□□□ -1.77
PUM3-204	ENST00000490444	MINDY4B	A8MYZ0	360 aa		3.99	□□□□□ -1.77
PUM3-204	ENST00000490444	CRK	P46108	304 aa		3.99	□□□□□ -1.77
PUM3-204	ENST00000490444	DIEXF	Q68CQ4	756 aa	Known RBP	3.99	□□□□□ -1.77
PUM3-204	ENST00000490444	FAM196A	Q6ZSG2	479 aa		3.99	□□□□□ -1.77
PUM3-204	ENST00000490444	USP48	Q86UV5	1035 aa		3.99	□□□□□ -1.77
PUM3-204	ENST00000490444	TSPYL5	Q86VY4	417 aa	Predicted RBP	3.99	□□□□□ -1.77
PUM3-204	ENST00000490444	NLGN1	Q8N2Q7	840 aa		3.99	□□□□□ -1.77
PUM3-204	ENST00000490444	FBXO27	Q8NI29	283 aa		3.99	□□□□□ -1.77
PUM3-204	ENST00000490444	ZNF296	Q8WUU4	475 aa	Predicted RBP	3.99	□□□□□ -1.77
PUM3-204	ENST00000490444	GATAD2B	Q8WXI9	593 aa		3.99	□□□□□ -1.77
PUM3-204	ENST00000490444	EAF1	Q96JC9	268 aa	Predicted RBP	3.99	□□□□□ -1.77
PUM3-204	ENST00000490444	LRRC3	Q9BY71	257 aa		3.99	□□□□□ -1.77
PUM3-204	ENST00000490444	GPR62	Q9BZJ7	368 aa		3.99	□□□□□ -1.77
PUM3-204	ENST00000490444	MIR1-1HG	Q9H1L0	117 aa		3.99	□□□□□ -1.77
PUM3-204	ENST00000490444	NOTO	A8MTQ0	251 aa		3.98	□□□□□ -1.77
PUM3-204	ENST00000490444	GALK1	P51570	392 aa		3.98	□□□□□ -1.77
PUM3-204	ENST00000490444	RPL6	Q02878	288 aa	Known RBP	3.98	□□□□□ -1.77
PUM3-204	ENST00000490444	NT5DC1	Q5TFE4	455 aa		3.98	□□□□□ -1.77
PUM3-204	ENST00000490444	LDHD	Q86WU2	507 aa		3.98	□□□□□ -1.77
PUM3-204	ENST00000490444	ZNF575	Q86XF7	245 aa		3.98	□□□□□ -1.77
PUM3-204	ENST00000490444	MCAT	Q8IVS2	390 aa	Known RBP	3.98	□□□□□ -1.77
PUM3-204	ENST00000490444	GOLM1	Q8NBJ4	401 aa		3.98	□□□□□ -1.77
PUM3-204	ENST00000490444	LINC01599	Q8WXQ3	324 aa		3.98	□□□□□ -1.77
PUM3-204	ENST00000490444	JARID2	Q92833	1246 aa	Predicted RBP	3.98	□□□□□ -1.77
PUM3-204	ENST00000490444	NT5C1A	Q9BXI3	368 aa		3.98	□□□□□ -1.77
PUM3-204	ENST00000490444	TGIF2	Q9GZN2	237 aa		3.98	□□□□□ -1.77
PUM3-204	ENST00000490444	EBF1	Q9UH73	591 aa		3.98	□□□□□ -1.77
PUM3-204	ENST00000490444	KCNH3	Q9ULD8	1083 aa		3.98	□□□□□ -1.77
PUM3-204	ENST00000490444	CEP131	Q9UPN4	1083 aa		3.98	□□□□□ -1.77
PUM3-204	ENST00000490444	POLR3K	Q9Y2Y1	108 aa	Predicted RBP	3.98	□□□□□ -1.77
PUM3-204	ENST00000490444	PRR36	Q9H6K5	1346 aa		3.97	□□□□□ -1.77
PUM3-204	ENST00000490444	LTK	P29376	864 aa		3.97	□□□□□ -1.77
PUM3-204	ENST00000490444	GJA8	P48165	433 aa		3.97	□□□□□ -1.77
PUM3-204	ENST00000490444	MPP2	Q14168	576 aa		3.97	□□□□□ -1.77
PUM3-204	ENST00000490444	REC114	Q7Z4M0	266 aa		3.97	□□□□□ -1.77
PUM3-204	ENST00000490444	ZNF654	Q8IZM8	581 aa		3.97	□□□□□ -1.77
PUM3-204	ENST00000490444	DNAJB8	Q8NHS0	232 aa		3.97	□□□□□ -1.77
PUM3-204	ENST00000490444		Q96M66	194 aa		3.97	□□□□□ -1.77
PUM3-204	ENST00000490444	C8orf49	Q96NF6	230 aa		3.97	□□□□□ -1.77
PUM3-204	ENST00000490444	UBP1	Q9NZI7	540 aa		3.97	□□□□□ -1.77
PUM3-204	ENST00000490444	ADAM30	Q9UKF2	790 aa		3.97	□□□□□ -1.77
PUM3-204	ENST00000490444	EPB41L3	Q9Y2J2	1087 aa	Predicted RBP	3.97	□□□□□ -1.77
PUM3-204	ENST00000490444	SUPT16H	Q9Y5B9	1047 aa	Known RBP	3.97	□□□□□ -1.77
PUM3-204	ENST00000490444	PCDHA11	Q9Y5I1	949 aa		3.97	□□□□□ -1.77
PUM3-204	ENST00000490444	ROBO2	Q9HCK4	1378 aa		3.97	□□□□□ -1.77
PUM3-204	ENST00000490444	RBAK-RBAKDN	I3L0D1	243 aa		3.96	□□□□□ -1.78

Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms